RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 NISCHQ9Y2I1 1504 aa48.52■■■■■ 5.36
TSC22D4-206ENST00000496728 CCDC180Q9P1Z9 1646 aa42.95■■■■■ 4.47
TSC22D4-206ENST00000496728 ABCC9O60706 1549 aa41.99■■■■■ 4.31
TSC22D4-206ENST00000496728 DCAF8L2P0C7V8 631 aa40.65■■■■■ 4.1
TSC22D4-206ENST00000496728 NACADO15069 1562 aa40.44■■■■■ 4.06
TSC22D4-206ENST00000496728 ZCCHC6Q5VYS8 1495 aaKnown RBP40.43■■■■■ 4.06
TSC22D4-206ENST00000496728 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
TSC22D4-206ENST00000496728 MYO15BQ96JP2 1530 aa40.24■■■■■ 4.03
TSC22D4-206ENST00000496728 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
TSC22D4-206ENST00000496728 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.89
TSC22D4-206ENST00000496728 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
TSC22D4-206ENST00000496728 SCRIBQ14160 1630 aa39.26■■■■□ 3.88
TSC22D4-206ENST00000496728 BICRAQ9NZM4 1560 aa39.14■■■■□ 3.86
TSC22D4-206ENST00000496728 SHROOM4Q9ULL8 1493 aa38.8■■■■□ 3.8
TSC22D4-206ENST00000496728 DNAJC5BQ9UF47 199 aa38.4■■■■□ 3.74
TSC22D4-206ENST00000496728 EIF4G1Q04637 1599 aaKnown RBP38.13■■■■□ 3.69
TSC22D4-206ENST00000496728 CC2D2AQ9P2K1 1620 aa37.92■■■■□ 3.66
TSC22D4-206ENST00000496728 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
TSC22D4-206ENST00000496728 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
TSC22D4-206ENST00000496728 SMARCA4P51532 1647 aa37.56■■■■□ 3.6
TSC22D4-206ENST00000496728 ATAD2BQ9ULI0 1458 aa37.39■■■■□ 3.58
TSC22D4-206ENST00000496728 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
TSC22D4-206ENST00000496728 NCAPD3P42695 1498 aa37.34■■■■□ 3.57
TSC22D4-206ENST00000496728 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
TSC22D4-206ENST00000496728 PEG3Q9GZU2 1588 aa37.18■■■■□ 3.54
TSC22D4-206ENST00000496728 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
TSC22D4-206ENST00000496728 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
TSC22D4-206ENST00000496728 RSF1Q96T23 1441 aaPredicted RBP37.07■■■■□ 3.52
TSC22D4-206ENST00000496728 WIZO95785 1651 aa36.95■■■■□ 3.51
TSC22D4-206ENST00000496728 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
TSC22D4-206ENST00000496728 SUPT5HO00267 1087 aaKnown RBP36.39■■■■□ 3.42
TSC22D4-206ENST00000496728 NESP48681 1621 aa36.36■■■■□ 3.41
TSC22D4-206ENST00000496728 CADPSQ9ULU8 1353 aa36.3■■■■□ 3.4
TSC22D4-206ENST00000496728 LAMC3Q9Y6N6 1575 aa36.28■■■■□ 3.4
TSC22D4-206ENST00000496728 CCDC88BA6NC98 1476 aa36.22■■■■□ 3.39
TSC22D4-206ENST00000496728 ERCC6Q03468 1493 aa36.21■■■■□ 3.39
TSC22D4-206ENST00000496728 PDS5BQ9NTI5 1447 aa36.13■■■■□ 3.37
TSC22D4-206ENST00000496728 CFTRP13569 1480 aa36.08■■■■□ 3.37
TSC22D4-206ENST00000496728 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
TSC22D4-206ENST00000496728 KIF21AQ7Z4S6 1674 aa35.82■■■■□ 3.33
TSC22D4-206ENST00000496728 CEP164Q9UPV0 1460 aa35.79■■■■□ 3.32
TSC22D4-206ENST00000496728 CUX2O14529 1486 aa35.73■■■■□ 3.31
TSC22D4-206ENST00000496728 MRC2Q9UBG0 1479 aa35.69■■■■□ 3.3
TSC22D4-206ENST00000496728 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
TSC22D4-206ENST00000496728 PRDM2Q13029 1718 aa35.63■■■■□ 3.29
TSC22D4-206ENST00000496728 WDR62O43379 1518 aa35.51■■■■□ 3.27
TSC22D4-206ENST00000496728 URB2Q14146 1524 aaKnown RBP35.45■■■■□ 3.27
TSC22D4-206ENST00000496728 ABCC8Q09428 1581 aa35.33■■■■□ 3.25
TSC22D4-206ENST00000496728 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
TSC22D4-206ENST00000496728 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
TSC22D4-206ENST00000496728 CUX1P39880 1505 aa35.06■■■■□ 3.2
TSC22D4-206ENST00000496728 IFT140Q96RY7 1462 aa35.04■■■■□ 3.2
TSC22D4-206ENST00000496728 POLA1P09884 1462 aaPredicted RBP34.98■■■■□ 3.19
TSC22D4-206ENST00000496728 WRNQ14191 1432 aaPredicted RBP eCLIP34.97■■■■□ 3.19
TSC22D4-206ENST00000496728 FGD5Q6ZNL6 1462 aa34.93■■■■□ 3.18
TSC22D4-206ENST00000496728 SOGA1O94964 1423 aa34.92■■■■□ 3.18
TSC22D4-206ENST00000496728 RAD54L2Q9Y4B4 1467 aa34.85■■■■□ 3.17
TSC22D4-206ENST00000496728 ZNF608Q9ULD9 1512 aaPredicted RBP34.83■■■■□ 3.17
TSC22D4-206ENST00000496728 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
TSC22D4-206ENST00000496728 TOP2BQ02880 1626 aa34.79■■■■□ 3.16
TSC22D4-206ENST00000496728 SYNJ1O43426 1573 aa34.77■■■■□ 3.16
TSC22D4-206ENST00000496728 BIVM-ERCC5R4GMW8 1640 aa34.73■■■■□ 3.15
TSC22D4-206ENST00000496728 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.155e-7■■■□□ 17.2
TSC22D4-206ENST00000496728 TDRD9Q8NDG6 1382 aaKnown RBP34.7■■■■□ 3.15
TSC22D4-206ENST00000496728 EIF4G3O43432 1585 aaKnown RBP34.64■■■■□ 3.14
TSC22D4-206ENST00000496728 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
TSC22D4-206ENST00000496728 WDR97A6NE52 1622 aa34.56■■■■□ 3.12
TSC22D4-206ENST00000496728 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
TSC22D4-206ENST00000496728 GAPVD1Q14C86 1478 aa34.49■■■■□ 3.11
TSC22D4-206ENST00000496728 GRIN2BQ13224 1484 aa34.46■■■■□ 3.11
TSC22D4-206ENST00000496728 OSCARQ8IYS5 282 aa34.39■■■■□ 3.1
TSC22D4-206ENST00000496728 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
TSC22D4-206ENST00000496728 SNAPC4Q5SXM2 1469 aa34.36■■■■□ 3.09
TSC22D4-206ENST00000496728 FBLN2P98095 1184 aa34.36■■■■□ 3.09
TSC22D4-206ENST00000496728 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
TSC22D4-206ENST00000496728 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
TSC22D4-206ENST00000496728 CHMP7Q8WUX9 453 aaPredicted RBP34.28■■■■□ 3.08
TSC22D4-206ENST00000496728 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
TSC22D4-206ENST00000496728 KIF27Q86VH2 1401 aa34.24■■■■□ 3.07
TSC22D4-206ENST00000496728 SYNJ2O15056 1496 aa34.2■■■■□ 3.06
TSC22D4-206ENST00000496728 ERICH3Q5RHP9 1530 aa34.19■■■■□ 3.06
TSC22D4-206ENST00000496728 CHD1O14646 1710 aa34.13■■■■□ 3.05
TSC22D4-206ENST00000496728 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
TSC22D4-206ENST00000496728 IGF1RP08069 1367 aa34.09■■■■□ 3.05
TSC22D4-206ENST00000496728 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
TSC22D4-206ENST00000496728 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
TSC22D4-206ENST00000496728 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
TSC22D4-206ENST00000496728 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
TSC22D4-206ENST00000496728 CARMIL1Q5VZK9 1371 aa33.9■■■■□ 3.02
TSC22D4-206ENST00000496728 CUL7Q14999 1698 aa33.87■■■■□ 3.01
TSC22D4-206ENST00000496728 NUP160Q12769 1436 aa33.83■■■■□ 3.01
TSC22D4-206ENST00000496728 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
TSC22D4-206ENST00000496728 CEP170Q5SW79 1584 aa33.76■■■□□ 2.99
TSC22D4-206ENST00000496728 EEA1Q15075 1411 aa33.71■■■□□ 2.99
TSC22D4-206ENST00000496728 ARHGEF11O15085 1522 aa33.7■■■□□ 2.99
TSC22D4-206ENST00000496728 CSRNP3Q8WYN3 585 aa33.7■■■□□ 2.99
TSC22D4-206ENST00000496728 RAPGEF2Q9Y4G8 1499 aa33.69■■■□□ 2.98
TSC22D4-206ENST00000496728 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
TSC22D4-206ENST00000496728 RIMBP3CA6NJZ7 1639 aa33.64■■■□□ 2.98
TSC22D4-206ENST00000496728 RIMBP3BA6NNM3 1639 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms