RNA–Protein interactions for RNA: ENST00000496688.1

PSMD5-207, Transcript of proteasome 26S subunit, non-ATPase 5, humanhuman

TSL 3

Gene PSMD5, Length 384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD5-207ENST00000496688 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
PSMD5-207ENST00000496688 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
PSMD5-207ENST00000496688 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
PSMD5-207ENST00000496688 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
PSMD5-207ENST00000496688 ABCC9O60706 1549 aa18.7■□□□□ 0.58
PSMD5-207ENST00000496688 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
PSMD5-207ENST00000496688 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
PSMD5-207ENST00000496688 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
PSMD5-207ENST00000496688 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
PSMD5-207ENST00000496688 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
PSMD5-207ENST00000496688 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
PSMD5-207ENST00000496688 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
PSMD5-207ENST00000496688 NACADO15069 1562 aa17.48■□□□□ 0.39
PSMD5-207ENST00000496688 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
PSMD5-207ENST00000496688 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
PSMD5-207ENST00000496688 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
PSMD5-207ENST00000496688 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
PSMD5-207ENST00000496688 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
PSMD5-207ENST00000496688 SUPT5HO00267 1087 aaKnown RBP16.93■□□□□ 0.3
PSMD5-207ENST00000496688 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
PSMD5-207ENST00000496688 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
PSMD5-207ENST00000496688 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
PSMD5-207ENST00000496688 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
PSMD5-207ENST00000496688 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
PSMD5-207ENST00000496688 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
PSMD5-207ENST00000496688 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
PSMD5-207ENST00000496688 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
PSMD5-207ENST00000496688 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
PSMD5-207ENST00000496688 WIZO95785 1651 aa16.4■□□□□ 0.22
PSMD5-207ENST00000496688 CUX2O14529 1486 aa16.38■□□□□ 0.21
PSMD5-207ENST00000496688 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
PSMD5-207ENST00000496688 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
PSMD5-207ENST00000496688 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
PSMD5-207ENST00000496688 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
PSMD5-207ENST00000496688 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
PSMD5-207ENST00000496688 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
PSMD5-207ENST00000496688 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
PSMD5-207ENST00000496688 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
PSMD5-207ENST00000496688 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
PSMD5-207ENST00000496688 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
PSMD5-207ENST00000496688 NESP48681 1621 aa15.86■□□□□ 0.13
PSMD5-207ENST00000496688 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
PSMD5-207ENST00000496688 CFTRP13569 1480 aa15.78■□□□□ 0.12
PSMD5-207ENST00000496688 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.11
PSMD5-207ENST00000496688 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
PSMD5-207ENST00000496688 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
PSMD5-207ENST00000496688 FOXD1Q16676 465 aa15.71■□□□□ 0.11
PSMD5-207ENST00000496688 EEA1Q15075 1411 aa15.68■□□□□ 0.1
PSMD5-207ENST00000496688 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
PSMD5-207ENST00000496688 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
PSMD5-207ENST00000496688 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
PSMD5-207ENST00000496688 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
PSMD5-207ENST00000496688 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
PSMD5-207ENST00000496688 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
PSMD5-207ENST00000496688 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
PSMD5-207ENST00000496688 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
PSMD5-207ENST00000496688 SOGA1O94964 1423 aa15.53■□□□□ 0.08
PSMD5-207ENST00000496688 CUX1P39880 1505 aa15.53■□□□□ 0.08
PSMD5-207ENST00000496688 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
PSMD5-207ENST00000496688 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
PSMD5-207ENST00000496688 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
PSMD5-207ENST00000496688 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
PSMD5-207ENST00000496688 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
PSMD5-207ENST00000496688 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
PSMD5-207ENST00000496688 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PSMD5-207ENST00000496688 RUSC2Q8N2Y8 1516 aa15.43■□□□□ 0.06
PSMD5-207ENST00000496688 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
PSMD5-207ENST00000496688 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
PSMD5-207ENST00000496688 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
PSMD5-207ENST00000496688 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
PSMD5-207ENST00000496688 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
PSMD5-207ENST00000496688 KIF21BO75037 1637 aa15.37■□□□□ 0.05
PSMD5-207ENST00000496688 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
PSMD5-207ENST00000496688 WDR62O43379 1518 aa15.35■□□□□ 0.05
PSMD5-207ENST00000496688 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
PSMD5-207ENST00000496688 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
PSMD5-207ENST00000496688 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
PSMD5-207ENST00000496688 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
PSMD5-207ENST00000496688 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
PSMD5-207ENST00000496688 PRXQ9BXM0 1461 aa15.29■□□□□ 0.04
PSMD5-207ENST00000496688 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
PSMD5-207ENST00000496688 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
PSMD5-207ENST00000496688 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.04
PSMD5-207ENST00000496688 UBTFP17480 764 aaKnown RBP15.27■□□□□ 0.04
PSMD5-207ENST00000496688 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
PSMD5-207ENST00000496688 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
PSMD5-207ENST00000496688 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
PSMD5-207ENST00000496688 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
PSMD5-207ENST00000496688 IGF1RP08069 1367 aa15.22■□□□□ 0.03
PSMD5-207ENST00000496688 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
PSMD5-207ENST00000496688 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
PSMD5-207ENST00000496688 ILDR1Q86SU0 546 aaPredicted RBP15.17■□□□□ 0.02
PSMD5-207ENST00000496688 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
PSMD5-207ENST00000496688 CARMIL1Q5VZK9 1371 aa15.14■□□□□ 0.01
PSMD5-207ENST00000496688 CLIP1P30622 1438 aa15.14■□□□□ 0.01
PSMD5-207ENST00000496688 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
PSMD5-207ENST00000496688 IFT140Q96RY7 1462 aa15.08■□□□□ 0.01
PSMD5-207ENST00000496688 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
PSMD5-207ENST00000496688 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
PSMD5-207ENST00000496688 CUL7Q14999 1698 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms