RNA–Protein interactions for RNA: ENST00000496152.1

NDUFAF3-206, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

TSL 2

Gene NDUFAF3, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-206ENST00000496152 NISCHQ9Y2I1 1504 aa30.43■■■□□ 2.46
NDUFAF3-206ENST00000496152 ABCC9O60706 1549 aa28.13■■■□□ 2.09
NDUFAF3-206ENST00000496152 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
NDUFAF3-206ENST00000496152 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
NDUFAF3-206ENST00000496152 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
NDUFAF3-206ENST00000496152 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.79
NDUFAF3-206ENST00000496152 NACADO15069 1562 aa26.16■■□□□ 1.78
NDUFAF3-206ENST00000496152 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
NDUFAF3-206ENST00000496152 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.71
NDUFAF3-206ENST00000496152 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
NDUFAF3-206ENST00000496152 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
NDUFAF3-206ENST00000496152 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
NDUFAF3-206ENST00000496152 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
NDUFAF3-206ENST00000496152 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
NDUFAF3-206ENST00000496152 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
NDUFAF3-206ENST00000496152 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
NDUFAF3-206ENST00000496152 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
NDUFAF3-206ENST00000496152 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
NDUFAF3-206ENST00000496152 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
NDUFAF3-206ENST00000496152 CUX2O14529 1486 aa24.47■■□□□ 1.51
NDUFAF3-206ENST00000496152 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
NDUFAF3-206ENST00000496152 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
NDUFAF3-206ENST00000496152 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
NDUFAF3-206ENST00000496152 NESP48681 1621 aa23.99■■□□□ 1.43
NDUFAF3-206ENST00000496152 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
NDUFAF3-206ENST00000496152 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
NDUFAF3-206ENST00000496152 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
NDUFAF3-206ENST00000496152 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
NDUFAF3-206ENST00000496152 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
NDUFAF3-206ENST00000496152 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
NDUFAF3-206ENST00000496152 PDS5BQ9NTI5 1447 aa23.67■■□□□ 1.38
NDUFAF3-206ENST00000496152 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
NDUFAF3-206ENST00000496152 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
NDUFAF3-206ENST00000496152 PEG3Q9GZU2 1588 aa23.58■■□□□ 1.37
NDUFAF3-206ENST00000496152 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
NDUFAF3-206ENST00000496152 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
NDUFAF3-206ENST00000496152 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
NDUFAF3-206ENST00000496152 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
NDUFAF3-206ENST00000496152 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
NDUFAF3-206ENST00000496152 WDR62O43379 1518 aa23.35■■□□□ 1.33
NDUFAF3-206ENST00000496152 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
NDUFAF3-206ENST00000496152 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
NDUFAF3-206ENST00000496152 CFTRP13569 1480 aa23.07■■□□□ 1.28
NDUFAF3-206ENST00000496152 WIZO95785 1651 aa23.03■■□□□ 1.28
NDUFAF3-206ENST00000496152 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
NDUFAF3-206ENST00000496152 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
NDUFAF3-206ENST00000496152 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
NDUFAF3-206ENST00000496152 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
NDUFAF3-206ENST00000496152 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
NDUFAF3-206ENST00000496152 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
NDUFAF3-206ENST00000496152 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
NDUFAF3-206ENST00000496152 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
NDUFAF3-206ENST00000496152 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
NDUFAF3-206ENST00000496152 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
NDUFAF3-206ENST00000496152 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
NDUFAF3-206ENST00000496152 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
NDUFAF3-206ENST00000496152 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
NDUFAF3-206ENST00000496152 FBLN2P98095 1184 aa22.6■■□□□ 1.21
NDUFAF3-206ENST00000496152 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.21
NDUFAF3-206ENST00000496152 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
NDUFAF3-206ENST00000496152 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
NDUFAF3-206ENST00000496152 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
NDUFAF3-206ENST00000496152 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
NDUFAF3-206ENST00000496152 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
NDUFAF3-206ENST00000496152 PRDM2Q13029 1718 aa22.45■■□□□ 1.19
NDUFAF3-206ENST00000496152 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
NDUFAF3-206ENST00000496152 CHD1O14646 1710 aa22.4■■□□□ 1.18
NDUFAF3-206ENST00000496152 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
NDUFAF3-206ENST00000496152 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
NDUFAF3-206ENST00000496152 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
NDUFAF3-206ENST00000496152 SOGA1O94964 1423 aa22.35■■□□□ 1.17
NDUFAF3-206ENST00000496152 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
NDUFAF3-206ENST00000496152 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
NDUFAF3-206ENST00000496152 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
NDUFAF3-206ENST00000496152 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
NDUFAF3-206ENST00000496152 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
NDUFAF3-206ENST00000496152 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
NDUFAF3-206ENST00000496152 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
NDUFAF3-206ENST00000496152 SYNJ2O15056 1496 aa22.15■■□□□ 1.14
NDUFAF3-206ENST00000496152 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
NDUFAF3-206ENST00000496152 WDR97A6NE52 1622 aa22.14■■□□□ 1.14
NDUFAF3-206ENST00000496152 CUX1P39880 1505 aa22.03■■□□□ 1.12
NDUFAF3-206ENST00000496152 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
NDUFAF3-206ENST00000496152 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
NDUFAF3-206ENST00000496152 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
NDUFAF3-206ENST00000496152 NUP160Q12769 1436 aa21.84■■□□□ 1.09
NDUFAF3-206ENST00000496152 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
NDUFAF3-206ENST00000496152 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
NDUFAF3-206ENST00000496152 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
NDUFAF3-206ENST00000496152 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
NDUFAF3-206ENST00000496152 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
NDUFAF3-206ENST00000496152 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
NDUFAF3-206ENST00000496152 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
NDUFAF3-206ENST00000496152 PRG4Q92954 1404 aaPredicted RBP21.71■■□□□ 1.07
NDUFAF3-206ENST00000496152 KDM4FA0A1W2PPD8 638 aa21.69■■□□□ 1.06
NDUFAF3-206ENST00000496152 NPM1P06748 294 aaKnown RBP eCLIP21.69■■□□□ 1.06
NDUFAF3-206ENST00000496152 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
NDUFAF3-206ENST00000496152 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
NDUFAF3-206ENST00000496152 ABCC10Q5T3U5 1492 aa21.66■■□□□ 1.06
NDUFAF3-206ENST00000496152 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms