RNA–Protein interactions for RNA: ENST00000496120.6

PBX1-210, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-210ENST00000496120 NISCHQ9Y2I1 1504 aa50.08■■■■■ 5.61
PBX1-210ENST00000496120 CCDC180Q9P1Z9 1646 aa44.99■■■■■ 4.79
PBX1-210ENST00000496120 ABCC9O60706 1549 aa44.94■■■■■ 4.78
PBX1-210ENST00000496120 RB1CC1Q8TDY2 1594 aa42.8■■■■■ 4.44
PBX1-210ENST00000496120 NACADO15069 1562 aa42.51■■■■■ 4.4
PBX1-210ENST00000496120 DNAJC5BQ9UF47 199 aa42.18■■■■■ 4.34
PBX1-210ENST00000496120 DCAF8L2P0C7V8 631 aa42.13■■■■■ 4.33
PBX1-210ENST00000496120 MYO15BQ96JP2 1530 aa41.95■■■■■ 4.31
PBX1-210ENST00000496120 UNC13AQ9UPW8 1703 aa41.9■■■■■ 4.3
PBX1-210ENST00000496120 PABPN1Q86U42 306 aaKnown RBP eCLIP41.79■■■■■ 4.28
PBX1-210ENST00000496120 ZCCHC6Q5VYS8 1495 aaKnown RBP41.68■■■■■ 4.26
PBX1-210ENST00000496120 BICRAQ9NZM4 1560 aa41.6■■■■■ 4.25
PBX1-210ENST00000496120 DCAF1Q9Y4B6 1507 aa41.4■■■■■ 4.22
PBX1-210ENST00000496120 SHROOM4Q9ULL8 1493 aa41.04■■■■■ 4.16
PBX1-210ENST00000496120 SCRIBQ14160 1630 aa40.94■■■■■ 4.14
PBX1-210ENST00000496120 CC2D2AQ9P2K1 1620 aa40.64■■■■■ 4.1
PBX1-210ENST00000496120 EIF4G1Q04637 1599 aaKnown RBP40.55■■■■■ 4.08
PBX1-210ENST00000496120 CECR2Q9BXF3 1484 aa40.49■■■■■ 4.07
PBX1-210ENST00000496120 NCAPD3P42695 1498 aa39.24■■■■□ 3.87
PBX1-210ENST00000496120 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
PBX1-210ENST00000496120 SMARCA4P51532 1647 aa39.09■■■■□ 3.85
PBX1-210ENST00000496120 SMARCA2P51531 1590 aa39■■■■□ 3.83
PBX1-210ENST00000496120 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
PBX1-210ENST00000496120 BAZ1AQ9NRL2 1556 aaPredicted RBP38.87■■■■□ 3.81
PBX1-210ENST00000496120 CUX2O14529 1486 aa38.77■■■■□ 3.8
PBX1-210ENST00000496120 ERCC6Q03468 1493 aa38.77■■■■□ 3.8
PBX1-210ENST00000496120 DNAJC5Q9H3Z4 198 aa38.74■■■■□ 3.79
PBX1-210ENST00000496120 PEG3Q9GZU2 1588 aa38.73■■■■□ 3.79
PBX1-210ENST00000496120 BAZ1BQ9UIG0 1483 aaKnown RBP38.72■■■■□ 3.79
PBX1-210ENST00000496120 NESP48681 1621 aa38.62■■■■□ 3.77
PBX1-210ENST00000496120 MROH2BQ7Z745 1585 aa38.59■■■■□ 3.77
PBX1-210ENST00000496120 SUPT5HO00267 1087 aaKnown RBP38.51■■■■□ 3.76
PBX1-210ENST00000496120 RSF1Q96T23 1441 aaPredicted RBP38.38■■■■□ 3.73
PBX1-210ENST00000496120 LAMC3Q9Y6N6 1575 aa38.37■■■■□ 3.73
PBX1-210ENST00000496120 THOC2Q8NI27 1593 aaKnown RBP38.29■■■■□ 3.72
PBX1-210ENST00000496120 KIF21AQ7Z4S6 1674 aa38.16■■■■□ 3.7
PBX1-210ENST00000496120 WIZO95785 1651 aa38.13■■■■□ 3.69
PBX1-210ENST00000496120 PDS5BQ9NTI5 1447 aa38.1■■■■□ 3.69
PBX1-210ENST00000496120 CADPSQ9ULU8 1353 aa38.02■■■■□ 3.68
PBX1-210ENST00000496120 MRC2Q9UBG0 1479 aa37.8■■■■□ 3.64
PBX1-210ENST00000496120 WDR62O43379 1518 aa37.75■■■■□ 3.63
PBX1-210ENST00000496120 TOP2AP11388 1531 aaKnown RBP37.65■■■■□ 3.62
PBX1-210ENST00000496120 CEP164Q9UPV0 1460 aa37.64■■■■□ 3.62
PBX1-210ENST00000496120 CFTRP13569 1480 aa37.61■■■■□ 3.61
PBX1-210ENST00000496120 FANCD2Q9BXW9 1451 aa37.59■■■■□ 3.61
PBX1-210ENST00000496120 URB2Q14146 1524 aaKnown RBP37.31■■■■□ 3.56
PBX1-210ENST00000496120 PRDM2Q13029 1718 aa37.29■■■■□ 3.56
PBX1-210ENST00000496120 CCDC88BA6NC98 1476 aa37.19■■■■□ 3.54
PBX1-210ENST00000496120 TRIM41Q8WV44 630 aa36.97■■■■□ 3.51
PBX1-210ENST00000496120 OSCARQ8IYS5 282 aa36.93■■■■□ 3.5
PBX1-210ENST00000496120 TOPBP1Q92547 1522 aa36.89■■■■□ 3.5
PBX1-210ENST00000496120 IFT140Q96RY7 1462 aa36.89■■■■□ 3.5
PBX1-210ENST00000496120 ZNF608Q9ULD9 1512 aaPredicted RBP36.84■■■■□ 3.49
PBX1-210ENST00000496120 CHIC1Q5VXU3 224 aa36.84■■■■□ 3.49
PBX1-210ENST00000496120 ABCC8Q09428 1581 aa36.8■■■■□ 3.48
PBX1-210ENST00000496120 DNMBPQ6XZF7 1577 aa36.77■■■■□ 3.48
PBX1-210ENST00000496120 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
PBX1-210ENST00000496120 TARBP1Q13395 1621 aaKnown RBP36.6■■■■□ 3.45
PBX1-210ENST00000496120 RIMBP3CA6NJZ7 1639 aa36.53■■■■□ 3.44
PBX1-210ENST00000496120 RIMBP3BA6NNM3 1639 aa36.53■■■■□ 3.44
PBX1-210ENST00000496120 RIMBP3Q9UFD9 1639 aa36.53■■■■□ 3.44
PBX1-210ENST00000496120 POLA1P09884 1462 aaPredicted RBP36.52■■■■□ 3.44
PBX1-210ENST00000496120 AQRO60306 1485 aaKnown RBP eCLIP36.47■■■■□ 3.43
PBX1-210ENST00000496120 ARHGEF11O15085 1522 aa36.4■■■■□ 3.42
PBX1-210ENST00000496120 CHD1O14646 1710 aa36.4■■■■□ 3.42
PBX1-210ENST00000496120 RAD54L2Q9Y4B4 1467 aa36.36■■■■□ 3.41
PBX1-210ENST00000496120 SOGA1O94964 1423 aa36.31■■■■□ 3.4
PBX1-210ENST00000496120 FGD5Q6ZNL6 1462 aa36.28■■■■□ 3.4
PBX1-210ENST00000496120 CUX1P39880 1505 aa36.26■■■■□ 3.39
PBX1-210ENST00000496120 TDRD9Q8NDG6 1382 aaKnown RBP36.24■■■■□ 3.39
PBX1-210ENST00000496120 WDR97A6NE52 1622 aa36.23■■■■□ 3.39
PBX1-210ENST00000496120 FBLN2P98095 1184 aa36.17■■■■□ 3.38
PBX1-210ENST00000496120 WRNQ14191 1432 aaPredicted RBP eCLIP36.12■■■■□ 3.379e-6■■■■■ 50.1
PBX1-210ENST00000496120 SNAPC4Q5SXM2 1469 aa36.12■■■■□ 3.37
PBX1-210ENST00000496120 ARAP1Q96P48 1450 aa36.06■■■■□ 3.36
PBX1-210ENST00000496120 CYB5RLQ6IPT4 315 aa36.05■■■■□ 3.36
PBX1-210ENST00000496120 SYNJ1O43426 1573 aa36.05■■■■□ 3.36
PBX1-210ENST00000496120 MAGI1Q96QZ7 1491 aaPredicted RBP36.03■■■■□ 3.36
PBX1-210ENST00000496120 GRIN2BQ13224 1484 aa36.02■■■■□ 3.36
PBX1-210ENST00000496120 CLASP1Q7Z460 1538 aa35.99■■■■□ 3.35
PBX1-210ENST00000496120 BIVM-ERCC5R4GMW8 1640 aa35.95■■■■□ 3.35
PBX1-210ENST00000496120 TOP2BQ02880 1626 aa35.94■■■■□ 3.34
PBX1-210ENST00000496120 CHMP7Q8WUX9 453 aaPredicted RBP35.93■■■■□ 3.34
PBX1-210ENST00000496120 PBRM1Q86U86 1689 aa35.93■■■■□ 3.34
PBX1-210ENST00000496120 SYNJ2O15056 1496 aa35.92■■■■□ 3.34
PBX1-210ENST00000496120 GAPVD1Q14C86 1478 aa35.89■■■■□ 3.34
PBX1-210ENST00000496120 ABCA10Q8WWZ4 1543 aa35.88■■■■□ 3.33
PBX1-210ENST00000496120 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
PBX1-210ENST00000496120 TRHP20396 242 aaPredicted RBP35.62■■■■□ 3.29
PBX1-210ENST00000496120 ADAMTS12P58397 1594 aa35.58■■■■□ 3.29
PBX1-210ENST00000496120 GRIN2AQ12879 1464 aa35.57■■■■□ 3.28
PBX1-210ENST00000496120 FAM9AQ8IZU1 332 aaPredicted RBP35.54■■■■□ 3.28
PBX1-210ENST00000496120 EEA1Q15075 1411 aa35.53■■■■□ 3.28
PBX1-210ENST00000496120 NUP160Q12769 1436 aa35.47■■■■□ 3.27
PBX1-210ENST00000496120 RUSC2Q8N2Y8 1516 aa35.47■■■■□ 3.27
PBX1-210ENST00000496120 CEP170Q5SW79 1584 aa35.47■■■■□ 3.27
PBX1-210ENST00000496120 FHAD1B1AJZ9 1412 aa35.44■■■■□ 3.26
PBX1-210ENST00000496120 ERICH3Q5RHP9 1530 aa35.43■■■■□ 3.26
PBX1-210ENST00000496120 ERCC6L2Q5T890 1561 aa35.41■■■■□ 3.26
PBX1-210ENST00000496120 LOC105371045A0A1W2PR82 267 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms