RNA–Protein interactions for RNA: ENST00000495930.1

ATP11A-215, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 4

Gene ATP11A, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-215ENST00000495930 NISCHQ9Y2I1 1504 aa39.08■■■■□ 3.85
ATP11A-215ENST00000495930 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
ATP11A-215ENST00000495930 ABCC9O60706 1549 aa34.81■■■■□ 3.16
ATP11A-215ENST00000495930 RB1CC1Q8TDY2 1594 aa33.24■■■□□ 2.91
ATP11A-215ENST00000495930 NACADO15069 1562 aa33.06■■■□□ 2.88
ATP11A-215ENST00000495930 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
ATP11A-215ENST00000495930 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
ATP11A-215ENST00000495930 DNAJC5BQ9UF47 199 aa32.45■■■□□ 2.79
ATP11A-215ENST00000495930 ZCCHC6Q5VYS8 1495 aaKnown RBP32.44■■■□□ 2.78
ATP11A-215ENST00000495930 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
ATP11A-215ENST00000495930 PABPN1Q86U42 306 aaKnown RBP eCLIP32.41■■■□□ 2.78
ATP11A-215ENST00000495930 DCAF1Q9Y4B6 1507 aa32.31■■■□□ 2.76
ATP11A-215ENST00000495930 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
ATP11A-215ENST00000495930 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
ATP11A-215ENST00000495930 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
ATP11A-215ENST00000495930 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
ATP11A-215ENST00000495930 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
ATP11A-215ENST00000495930 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
ATP11A-215ENST00000495930 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
ATP11A-215ENST00000495930 SMARCA4P51532 1647 aa30.45■■■□□ 2.47
ATP11A-215ENST00000495930 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
ATP11A-215ENST00000495930 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
ATP11A-215ENST00000495930 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
ATP11A-215ENST00000495930 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
ATP11A-215ENST00000495930 PEG3Q9GZU2 1588 aa30.17■■■□□ 2.42
ATP11A-215ENST00000495930 BAZ1BQ9UIG0 1483 aaKnown RBP30.16■■■□□ 2.42
ATP11A-215ENST00000495930 MROH2BQ7Z745 1585 aa30.1■■■□□ 2.41
ATP11A-215ENST00000495930 ERCC6Q03468 1493 aa30.07■■■□□ 2.4
ATP11A-215ENST00000495930 CUX2O14529 1486 aa29.98■■■□□ 2.39
ATP11A-215ENST00000495930 NESP48681 1621 aa29.95■■■□□ 2.38
ATP11A-215ENST00000495930 LAMC3Q9Y6N6 1575 aa29.8■■■□□ 2.36
ATP11A-215ENST00000495930 WIZO95785 1651 aa29.73■■■□□ 2.35
ATP11A-215ENST00000495930 DNAJC5Q9H3Z4 198 aa29.7■■■□□ 2.35
ATP11A-215ENST00000495930 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
ATP11A-215ENST00000495930 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
ATP11A-215ENST00000495930 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
ATP11A-215ENST00000495930 KIF21AQ7Z4S6 1674 aa29.57■■■□□ 2.32
ATP11A-215ENST00000495930 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
ATP11A-215ENST00000495930 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
ATP11A-215ENST00000495930 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
ATP11A-215ENST00000495930 WDR62O43379 1518 aa29.3■■■□□ 2.28
ATP11A-215ENST00000495930 CFTRP13569 1480 aa29.29■■■□□ 2.28
ATP11A-215ENST00000495930 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
ATP11A-215ENST00000495930 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
ATP11A-215ENST00000495930 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
ATP11A-215ENST00000495930 PRDM2Q13029 1718 aa29■■■□□ 2.23
ATP11A-215ENST00000495930 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
ATP11A-215ENST00000495930 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
ATP11A-215ENST00000495930 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
ATP11A-215ENST00000495930 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
ATP11A-215ENST00000495930 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
ATP11A-215ENST00000495930 ZNF608Q9ULD9 1512 aaPredicted RBP28.6■■■□□ 2.17
ATP11A-215ENST00000495930 OSCARQ8IYS5 282 aa28.58■■■□□ 2.17
ATP11A-215ENST00000495930 EIF4G3O43432 1585 aaKnown RBP28.48■■■□□ 2.15
ATP11A-215ENST00000495930 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
ATP11A-215ENST00000495930 TARBP1Q13395 1621 aaKnown RBP28.44■■■□□ 2.14
ATP11A-215ENST00000495930 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
ATP11A-215ENST00000495930 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.135e-10■■■■□ 23.2
ATP11A-215ENST00000495930 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
ATP11A-215ENST00000495930 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
ATP11A-215ENST00000495930 SOGA1O94964 1423 aa28.29■■■□□ 2.12
ATP11A-215ENST00000495930 FGD5Q6ZNL6 1462 aa28.28■■■□□ 2.12
ATP11A-215ENST00000495930 CUX1P39880 1505 aa28.28■■■□□ 2.12
ATP11A-215ENST00000495930 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
ATP11A-215ENST00000495930 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
ATP11A-215ENST00000495930 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
ATP11A-215ENST00000495930 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
ATP11A-215ENST00000495930 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
ATP11A-215ENST00000495930 CHD1O14646 1710 aa28.2■■■□□ 2.1
ATP11A-215ENST00000495930 ARHGEF11O15085 1522 aa28.16■■■□□ 2.1
ATP11A-215ENST00000495930 FBLN2P98095 1184 aa28.12■■■□□ 2.09
ATP11A-215ENST00000495930 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
ATP11A-215ENST00000495930 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
ATP11A-215ENST00000495930 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
ATP11A-215ENST00000495930 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
ATP11A-215ENST00000495930 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
ATP11A-215ENST00000495930 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
ATP11A-215ENST00000495930 SYNJ2O15056 1496 aa27.95■■■□□ 2.06
ATP11A-215ENST00000495930 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
ATP11A-215ENST00000495930 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
ATP11A-215ENST00000495930 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
ATP11A-215ENST00000495930 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
ATP11A-215ENST00000495930 WRNQ14191 1432 aaPredicted RBP eCLIP27.9■■■□□ 2.06
ATP11A-215ENST00000495930 CYB5RLQ6IPT4 315 aa27.89■■■□□ 2.06
ATP11A-215ENST00000495930 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
ATP11A-215ENST00000495930 TOP2BQ02880 1626 aa27.89■■■□□ 2.05
ATP11A-215ENST00000495930 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
ATP11A-215ENST00000495930 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
ATP11A-215ENST00000495930 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
ATP11A-215ENST00000495930 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
ATP11A-215ENST00000495930 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
ATP11A-215ENST00000495930 NUP160Q12769 1436 aa27.59■■■□□ 2.01
ATP11A-215ENST00000495930 CEP170Q5SW79 1584 aa27.58■■■□□ 2.01
ATP11A-215ENST00000495930 TRHP20396 242 aaPredicted RBP27.53■■■□□ 2
ATP11A-215ENST00000495930 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
ATP11A-215ENST00000495930 SHROOM2Q13796 1616 aa27.45■■□□□ 1.98
ATP11A-215ENST00000495930 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
ATP11A-215ENST00000495930 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
ATP11A-215ENST00000495930 PRG4Q92954 1404 aaPredicted RBP27.3■■□□□ 1.96
ATP11A-215ENST00000495930 IGF1RP08069 1367 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms