RNA–Protein interactions for RNA: ENST00000495599.1

PRDX4-205, Transcript of peroxiredoxin 4, humanhuman

TSL 3

Gene PRDX4, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX4-205ENST00000495599 NISCHQ9Y2I1 1504 aa42.58■■■■■ 4.41
PRDX4-205ENST00000495599 CCDC180Q9P1Z9 1646 aa38.12■■■■□ 3.69
PRDX4-205ENST00000495599 ABCC9O60706 1549 aa37.94■■■■□ 3.66
PRDX4-205ENST00000495599 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
PRDX4-205ENST00000495599 NACADO15069 1562 aa35.97■■■■□ 3.35
PRDX4-205ENST00000495599 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
PRDX4-205ENST00000495599 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
PRDX4-205ENST00000495599 MYO15BQ96JP2 1530 aa35.48■■■■□ 3.27
PRDX4-205ENST00000495599 DNAJC5BQ9UF47 199 aa35.41■■■■□ 3.26
PRDX4-205ENST00000495599 PABPN1Q86U42 306 aaKnown RBP eCLIP35.38■■■■□ 3.25
PRDX4-205ENST00000495599 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
PRDX4-205ENST00000495599 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
PRDX4-205ENST00000495599 DCAF1Q9Y4B6 1507 aa35.13■■■■□ 3.21
PRDX4-205ENST00000495599 SCRIBQ14160 1630 aa34.8■■■■□ 3.16
PRDX4-205ENST00000495599 SHROOM4Q9ULL8 1493 aa34.57■■■■□ 3.12
PRDX4-205ENST00000495599 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
PRDX4-205ENST00000495599 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
PRDX4-205ENST00000495599 CECR2Q9BXF3 1484 aa34.13■■■■□ 3.05
PRDX4-205ENST00000495599 SMARCA4P51532 1647 aa33.2■■■□□ 2.9
PRDX4-205ENST00000495599 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
PRDX4-205ENST00000495599 ATAD2BQ9ULI0 1458 aa33.13■■■□□ 2.89
PRDX4-205ENST00000495599 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
PRDX4-205ENST00000495599 BAZ1AQ9NRL2 1556 aaPredicted RBP33.02■■■□□ 2.88
PRDX4-205ENST00000495599 HMGXB3Q12766 1538 aa32.96■■■□□ 2.87
PRDX4-205ENST00000495599 BAZ1BQ9UIG0 1483 aaKnown RBP32.84■■■□□ 2.85
PRDX4-205ENST00000495599 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
PRDX4-205ENST00000495599 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
PRDX4-205ENST00000495599 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
PRDX4-205ENST00000495599 NESP48681 1621 aa32.67■■■□□ 2.82
PRDX4-205ENST00000495599 CUX2O14529 1486 aa32.54■■■□□ 2.8
PRDX4-205ENST00000495599 WIZO95785 1651 aa32.51■■■□□ 2.79
PRDX4-205ENST00000495599 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
PRDX4-205ENST00000495599 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
PRDX4-205ENST00000495599 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
PRDX4-205ENST00000495599 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
PRDX4-205ENST00000495599 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
PRDX4-205ENST00000495599 PDS5BQ9NTI5 1447 aa32.21■■■□□ 2.75
PRDX4-205ENST00000495599 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
PRDX4-205ENST00000495599 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
PRDX4-205ENST00000495599 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
PRDX4-205ENST00000495599 CFTRP13569 1480 aa31.88■■■□□ 2.69
PRDX4-205ENST00000495599 WDR62O43379 1518 aa31.85■■■□□ 2.69
PRDX4-205ENST00000495599 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
PRDX4-205ENST00000495599 CEP164Q9UPV0 1460 aa31.85■■■□□ 2.69
PRDX4-205ENST00000495599 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
PRDX4-205ENST00000495599 PRDM2Q13029 1718 aa31.68■■■□□ 2.66
PRDX4-205ENST00000495599 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
PRDX4-205ENST00000495599 TOPBP1Q92547 1522 aa31.28■■■□□ 2.6
PRDX4-205ENST00000495599 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
PRDX4-205ENST00000495599 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
PRDX4-205ENST00000495599 DNMBPQ6XZF7 1577 aa31.18■■■□□ 2.58
PRDX4-205ENST00000495599 ZNF608Q9ULD9 1512 aaPredicted RBP31.18■■■□□ 2.58
PRDX4-205ENST00000495599 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
PRDX4-205ENST00000495599 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
PRDX4-205ENST00000495599 EIF4G3O43432 1585 aaKnown RBP31.02■■■□□ 2.56
PRDX4-205ENST00000495599 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
PRDX4-205ENST00000495599 TARBP1Q13395 1621 aaKnown RBP31.01■■■□□ 2.55
PRDX4-205ENST00000495599 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
PRDX4-205ENST00000495599 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.54
PRDX4-205ENST00000495599 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.53
PRDX4-205ENST00000495599 CUX1P39880 1505 aa30.83■■■□□ 2.53
PRDX4-205ENST00000495599 SOGA1O94964 1423 aa30.83■■■□□ 2.53
PRDX4-205ENST00000495599 FGD5Q6ZNL6 1462 aa30.82■■■□□ 2.52
PRDX4-205ENST00000495599 CHD1O14646 1710 aa30.81■■■□□ 2.52
PRDX4-205ENST00000495599 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
PRDX4-205ENST00000495599 RIMBP3CA6NJZ7 1639 aa30.75■■■□□ 2.51
PRDX4-205ENST00000495599 RIMBP3BA6NNM3 1639 aa30.75■■■□□ 2.51
PRDX4-205ENST00000495599 RIMBP3Q9UFD9 1639 aa30.75■■■□□ 2.51
PRDX4-205ENST00000495599 FBLN2P98095 1184 aa30.69■■■□□ 2.5
PRDX4-205ENST00000495599 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
PRDX4-205ENST00000495599 ARHGEF11O15085 1522 aa30.63■■■□□ 2.49
PRDX4-205ENST00000495599 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
PRDX4-205ENST00000495599 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
PRDX4-205ENST00000495599 PBRM1Q86U86 1689 aa30.51■■■□□ 2.47
PRDX4-205ENST00000495599 MAGI1Q96QZ7 1491 aaPredicted RBP30.49■■■□□ 2.47
PRDX4-205ENST00000495599 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
PRDX4-205ENST00000495599 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
PRDX4-205ENST00000495599 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
PRDX4-205ENST00000495599 CYB5RLQ6IPT4 315 aa30.43■■■□□ 2.46
PRDX4-205ENST00000495599 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
PRDX4-205ENST00000495599 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
PRDX4-205ENST00000495599 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
PRDX4-205ENST00000495599 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
PRDX4-205ENST00000495599 SYNJ1O43426 1573 aa30.39■■■□□ 2.46
PRDX4-205ENST00000495599 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
PRDX4-205ENST00000495599 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
PRDX4-205ENST00000495599 ARAP1Q96P48 1450 aa30.35■■■□□ 2.45
PRDX4-205ENST00000495599 ADAMTS12P58397 1594 aa30.16■■■□□ 2.42
PRDX4-205ENST00000495599 GRIN2AQ12879 1464 aa30.14■■■□□ 2.42
PRDX4-205ENST00000495599 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
PRDX4-205ENST00000495599 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
PRDX4-205ENST00000495599 CEP170Q5SW79 1584 aa30.06■■■□□ 2.4
PRDX4-205ENST00000495599 TRHP20396 242 aaPredicted RBP30.02■■■□□ 2.4
PRDX4-205ENST00000495599 NUP160Q12769 1436 aa30.01■■■□□ 2.39
PRDX4-205ENST00000495599 ERCC6L2Q5T890 1561 aa29.98■■■□□ 2.39
PRDX4-205ENST00000495599 SHROOM2Q13796 1616 aa29.89■■■□□ 2.38
PRDX4-205ENST00000495599 KIF27Q86VH2 1401 aa29.78■■■□□ 2.36
PRDX4-205ENST00000495599 IGF1RP08069 1367 aa29.76■■■□□ 2.35
PRDX4-205ENST00000495599 RUSC2Q8N2Y8 1516 aa29.75■■■□□ 2.35
PRDX4-205ENST00000495599 PRG4Q92954 1404 aaPredicted RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms