RNA–Protein interactions for RNA: ENST00000495594.2

LEMD1-208, Transcript of LEM domain containing 1, humanhuman

TSL 3 BASIC

Gene LEMD1, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-208ENST00000495594 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
LEMD1-208ENST00000495594 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
LEMD1-208ENST00000495594 ABCC9O60706 1549 aa18.06■□□□□ 0.48
LEMD1-208ENST00000495594 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
LEMD1-208ENST00000495594 NACADO15069 1562 aa17.15■□□□□ 0.34
LEMD1-208ENST00000495594 UNC13AQ9UPW8 1703 aa16.97■□□□□ 0.31
LEMD1-208ENST00000495594 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
LEMD1-208ENST00000495594 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
LEMD1-208ENST00000495594 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
LEMD1-208ENST00000495594 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
LEMD1-208ENST00000495594 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
LEMD1-208ENST00000495594 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
LEMD1-208ENST00000495594 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
LEMD1-208ENST00000495594 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
LEMD1-208ENST00000495594 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
LEMD1-208ENST00000495594 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
LEMD1-208ENST00000495594 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
LEMD1-208ENST00000495594 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
LEMD1-208ENST00000495594 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
LEMD1-208ENST00000495594 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
LEMD1-208ENST00000495594 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
LEMD1-208ENST00000495594 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
LEMD1-208ENST00000495594 CUX2O14529 1486 aa15.72■□□□□ 0.11
LEMD1-208ENST00000495594 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
LEMD1-208ENST00000495594 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
LEMD1-208ENST00000495594 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
LEMD1-208ENST00000495594 DNAJC5Q9H3Z4 198 aa15.62■□□□□ 0.09
LEMD1-208ENST00000495594 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
LEMD1-208ENST00000495594 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
LEMD1-208ENST00000495594 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
LEMD1-208ENST00000495594 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
LEMD1-208ENST00000495594 NESP48681 1621 aa15.46■□□□□ 0.07
LEMD1-208ENST00000495594 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
LEMD1-208ENST00000495594 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
LEMD1-208ENST00000495594 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
LEMD1-208ENST00000495594 WIZO95785 1651 aa15.28■□□□□ 0.04
LEMD1-208ENST00000495594 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
LEMD1-208ENST00000495594 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
LEMD1-208ENST00000495594 WDR62O43379 1518 aa15.22■□□□□ 0.03
LEMD1-208ENST00000495594 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
LEMD1-208ENST00000495594 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
LEMD1-208ENST00000495594 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
LEMD1-208ENST00000495594 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
LEMD1-208ENST00000495594 CFTRP13569 1480 aa15.08■□□□□ 0
LEMD1-208ENST00000495594 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
LEMD1-208ENST00000495594 URB2Q14146 1524 aaKnown RBP14.96□□□□□ -0.02
LEMD1-208ENST00000495594 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
LEMD1-208ENST00000495594 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
LEMD1-208ENST00000495594 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
LEMD1-208ENST00000495594 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
LEMD1-208ENST00000495594 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.03
LEMD1-208ENST00000495594 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
LEMD1-208ENST00000495594 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
LEMD1-208ENST00000495594 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
LEMD1-208ENST00000495594 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
LEMD1-208ENST00000495594 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
LEMD1-208ENST00000495594 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
LEMD1-208ENST00000495594 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
LEMD1-208ENST00000495594 CHD1O14646 1710 aa14.75□□□□□ -0.05
LEMD1-208ENST00000495594 ZNF608Q9ULD9 1512 aaPredicted RBP14.75□□□□□ -0.05
LEMD1-208ENST00000495594 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
LEMD1-208ENST00000495594 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
LEMD1-208ENST00000495594 ARHGEF11O15085 1522 aa14.7□□□□□ -0.06
LEMD1-208ENST00000495594 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
LEMD1-208ENST00000495594 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.08
LEMD1-208ENST00000495594 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
LEMD1-208ENST00000495594 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
LEMD1-208ENST00000495594 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
LEMD1-208ENST00000495594 SOGA1O94964 1423 aa14.54□□□□□ -0.08
LEMD1-208ENST00000495594 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
LEMD1-208ENST00000495594 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
LEMD1-208ENST00000495594 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
LEMD1-208ENST00000495594 ARAP1Q96P48 1450 aa14.52□□□□□ -0.08
LEMD1-208ENST00000495594 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
LEMD1-208ENST00000495594 CUX1P39880 1505 aa14.51□□□□□ -0.09
LEMD1-208ENST00000495594 CLASP1Q7Z460 1538 aa14.51□□□□□ -0.09
LEMD1-208ENST00000495594 FBLN2P98095 1184 aa14.49□□□□□ -0.09
LEMD1-208ENST00000495594 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
LEMD1-208ENST00000495594 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
LEMD1-208ENST00000495594 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
LEMD1-208ENST00000495594 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.1
LEMD1-208ENST00000495594 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
LEMD1-208ENST00000495594 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
LEMD1-208ENST00000495594 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
LEMD1-208ENST00000495594 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
LEMD1-208ENST00000495594 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
LEMD1-208ENST00000495594 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
LEMD1-208ENST00000495594 ADAMTS12P58397 1594 aa14.34□□□□□ -0.11
LEMD1-208ENST00000495594 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
LEMD1-208ENST00000495594 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
LEMD1-208ENST00000495594 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
LEMD1-208ENST00000495594 SHROOM2Q13796 1616 aa14.26□□□□□ -0.13
LEMD1-208ENST00000495594 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
LEMD1-208ENST00000495594 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
LEMD1-208ENST00000495594 NUP160Q12769 1436 aa14.24□□□□□ -0.13
LEMD1-208ENST00000495594 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
LEMD1-208ENST00000495594 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
LEMD1-208ENST00000495594 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
LEMD1-208ENST00000495594 KIF13AQ9H1H9 1805 aa14.15□□□□□ -0.14
LEMD1-208ENST00000495594 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms