RNA–Protein interactions for RNA: ENST00000495503.5

ZNF561-220, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 880 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-220ENST00000495503 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
ZNF561-220ENST00000495503 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
ZNF561-220ENST00000495503 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
ZNF561-220ENST00000495503 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
ZNF561-220ENST00000495503 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
ZNF561-220ENST00000495503 ABCC9O60706 1549 aa18.69■□□□□ 0.58
ZNF561-220ENST00000495503 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
ZNF561-220ENST00000495503 FOXD1Q16676 465 aa18.03■□□□□ 0.48
ZNF561-220ENST00000495503 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
ZNF561-220ENST00000495503 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
ZNF561-220ENST00000495503 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
ZNF561-220ENST00000495503 NACADO15069 1562 aa17.15■□□□□ 0.34
ZNF561-220ENST00000495503 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
ZNF561-220ENST00000495503 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
ZNF561-220ENST00000495503 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
ZNF561-220ENST00000495503 MSH5O43196 834 aa17.06■□□□□ 0.32
ZNF561-220ENST00000495503 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
ZNF561-220ENST00000495503 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
ZNF561-220ENST00000495503 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
ZNF561-220ENST00000495503 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
ZNF561-220ENST00000495503 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
ZNF561-220ENST00000495503 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
ZNF561-220ENST00000495503 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
ZNF561-220ENST00000495503 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
ZNF561-220ENST00000495503 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
ZNF561-220ENST00000495503 ADRA2BP18089 450 aa16.62■□□□□ 0.25
ZNF561-220ENST00000495503 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
ZNF561-220ENST00000495503 SCRIBQ14160 1630 aa16.4■□□□□ 0.22
ZNF561-220ENST00000495503 CUX2O14529 1486 aa16.3■□□□□ 0.2
ZNF561-220ENST00000495503 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
ZNF561-220ENST00000495503 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
ZNF561-220ENST00000495503 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
ZNF561-220ENST00000495503 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
ZNF561-220ENST00000495503 NESP48681 1621 aa15.91■□□□□ 0.14
ZNF561-220ENST00000495503 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
ZNF561-220ENST00000495503 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
ZNF561-220ENST00000495503 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
ZNF561-220ENST00000495503 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
ZNF561-220ENST00000495503 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
ZNF561-220ENST00000495503 KIF21AQ7Z4S6 1674 aa15.65■□□□□ 0.1
ZNF561-220ENST00000495503 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
ZNF561-220ENST00000495503 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
ZNF561-220ENST00000495503 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
ZNF561-220ENST00000495503 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
ZNF561-220ENST00000495503 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
ZNF561-220ENST00000495503 WDR62O43379 1518 aa15.45■□□□□ 0.06
ZNF561-220ENST00000495503 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
ZNF561-220ENST00000495503 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
ZNF561-220ENST00000495503 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
ZNF561-220ENST00000495503 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
ZNF561-220ENST00000495503 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
ZNF561-220ENST00000495503 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
ZNF561-220ENST00000495503 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
ZNF561-220ENST00000495503 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
ZNF561-220ENST00000495503 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
ZNF561-220ENST00000495503 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
ZNF561-220ENST00000495503 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
ZNF561-220ENST00000495503 ARHGEF11O15085 1522 aa15.26■□□□□ 0.03
ZNF561-220ENST00000495503 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
ZNF561-220ENST00000495503 FANCD2Q9BXW9 1451 aa15.18■□□□□ 0.02
ZNF561-220ENST00000495503 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
ZNF561-220ENST00000495503 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
ZNF561-220ENST00000495503 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
ZNF561-220ENST00000495503 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
ZNF561-220ENST00000495503 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
ZNF561-220ENST00000495503 WIZO95785 1651 aa15.06■□□□□ 0
ZNF561-220ENST00000495503 CFTRP13569 1480 aa15.05■□□□□ -0
ZNF561-220ENST00000495503 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
ZNF561-220ENST00000495503 CHD1O14646 1710 aa14.95□□□□□ -0.02
ZNF561-220ENST00000495503 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
ZNF561-220ENST00000495503 RSF1Q96T23 1441 aaPredicted RBP14.89□□□□□ -0.03
ZNF561-220ENST00000495503 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
ZNF561-220ENST00000495503 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.033e-6■■■■■ 29
ZNF561-220ENST00000495503 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
ZNF561-220ENST00000495503 PRDM2Q13029 1718 aa14.82□□□□□ -0.04
ZNF561-220ENST00000495503 FBLN2P98095 1184 aa14.79□□□□□ -0.04
ZNF561-220ENST00000495503 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
ZNF561-220ENST00000495503 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
ZNF561-220ENST00000495503 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
ZNF561-220ENST00000495503 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
ZNF561-220ENST00000495503 ILDR1Q86SU0 546 aaPredicted RBP14.72□□□□□ -0.05
ZNF561-220ENST00000495503 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
ZNF561-220ENST00000495503 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
ZNF561-220ENST00000495503 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
ZNF561-220ENST00000495503 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
ZNF561-220ENST00000495503 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
ZNF561-220ENST00000495503 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
ZNF561-220ENST00000495503 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
ZNF561-220ENST00000495503 CCDC88BA6NC98 1476 aa14.64□□□□□ -0.07
ZNF561-220ENST00000495503 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
ZNF561-220ENST00000495503 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
ZNF561-220ENST00000495503 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
ZNF561-220ENST00000495503 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
ZNF561-220ENST00000495503 RNF216Q9NWF9 866 aaPredicted RBP14.59□□□□□ -0.07
ZNF561-220ENST00000495503 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
ZNF561-220ENST00000495503 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
ZNF561-220ENST00000495503 SOGA1O94964 1423 aa14.54□□□□□ -0.08
ZNF561-220ENST00000495503 KIF13AQ9H1H9 1805 aa14.53□□□□□ -0.08
ZNF561-220ENST00000495503 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
ZNF561-220ENST00000495503 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms