RNA–Protein interactions for RNA: ENST00000495259.1

CENPF-205, Transcript of centromere protein F, humanhuman

TSL 3

Gene CENPF, Length 345 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPF-205ENST00000495259 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
CENPF-205ENST00000495259 CCDC180Q9P1Z9 1646 aa27.82■■■□□ 2.04
CENPF-205ENST00000495259 ABCC9O60706 1549 aa26.99■■□□□ 1.91
CENPF-205ENST00000495259 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
CENPF-205ENST00000495259 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
CENPF-205ENST00000495259 NACADO15069 1562 aa26.16■■□□□ 1.78
CENPF-205ENST00000495259 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
CENPF-205ENST00000495259 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
CENPF-205ENST00000495259 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
CENPF-205ENST00000495259 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
CENPF-205ENST00000495259 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
CENPF-205ENST00000495259 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
CENPF-205ENST00000495259 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
CENPF-205ENST00000495259 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
CENPF-205ENST00000495259 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
CENPF-205ENST00000495259 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
CENPF-205ENST00000495259 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
CENPF-205ENST00000495259 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
CENPF-205ENST00000495259 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
CENPF-205ENST00000495259 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
CENPF-205ENST00000495259 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
CENPF-205ENST00000495259 RSF1Q96T23 1441 aaPredicted RBP24.28■■□□□ 1.48
CENPF-205ENST00000495259 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
CENPF-205ENST00000495259 SMARCA2P51531 1590 aa24.2■■□□□ 1.46
CENPF-205ENST00000495259 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
CENPF-205ENST00000495259 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
CENPF-205ENST00000495259 WIZO95785 1651 aa24.08■■□□□ 1.45
CENPF-205ENST00000495259 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
CENPF-205ENST00000495259 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
CENPF-205ENST00000495259 HMGXB3Q12766 1538 aa24.02■■□□□ 1.44
CENPF-205ENST00000495259 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
CENPF-205ENST00000495259 CCDC88BA6NC98 1476 aa23.65■■□□□ 1.38
CENPF-205ENST00000495259 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
CENPF-205ENST00000495259 NESP48681 1621 aa23.45■■□□□ 1.34
CENPF-205ENST00000495259 CFTRP13569 1480 aa23.43■■□□□ 1.34
CENPF-205ENST00000495259 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
CENPF-205ENST00000495259 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
CENPF-205ENST00000495259 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
CENPF-205ENST00000495259 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
CENPF-205ENST00000495259 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
CENPF-205ENST00000495259 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
CENPF-205ENST00000495259 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
CENPF-205ENST00000495259 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
CENPF-205ENST00000495259 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
CENPF-205ENST00000495259 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
CENPF-205ENST00000495259 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
CENPF-205ENST00000495259 WDR62O43379 1518 aa22.88■■□□□ 1.25
CENPF-205ENST00000495259 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
CENPF-205ENST00000495259 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
CENPF-205ENST00000495259 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
CENPF-205ENST00000495259 CUX2O14529 1486 aa22.83■■□□□ 1.25
CENPF-205ENST00000495259 CUX1P39880 1505 aa22.82■■□□□ 1.24
CENPF-205ENST00000495259 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
CENPF-205ENST00000495259 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
CENPF-205ENST00000495259 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
CENPF-205ENST00000495259 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
CENPF-205ENST00000495259 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
CENPF-205ENST00000495259 SOGA1O94964 1423 aa22.69■■□□□ 1.22
CENPF-205ENST00000495259 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
CENPF-205ENST00000495259 BIVM-ERCC5R4GMW8 1640 aa22.66■■□□□ 1.22
CENPF-205ENST00000495259 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
CENPF-205ENST00000495259 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
CENPF-205ENST00000495259 TARBP1Q13395 1621 aaKnown RBP22.55■■□□□ 1.2
CENPF-205ENST00000495259 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
CENPF-205ENST00000495259 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
CENPF-205ENST00000495259 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
CENPF-205ENST00000495259 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.19
CENPF-205ENST00000495259 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
CENPF-205ENST00000495259 KIF27Q86VH2 1401 aa22.39■■□□□ 1.17
CENPF-205ENST00000495259 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
CENPF-205ENST00000495259 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
CENPF-205ENST00000495259 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
CENPF-205ENST00000495259 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
CENPF-205ENST00000495259 IGF1RP08069 1367 aa22.29■■□□□ 1.16
CENPF-205ENST00000495259 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
CENPF-205ENST00000495259 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
CENPF-205ENST00000495259 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
CENPF-205ENST00000495259 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
CENPF-205ENST00000495259 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
CENPF-205ENST00000495259 MAGI1Q96QZ7 1491 aaPredicted RBP22.21■■□□□ 1.15
CENPF-205ENST00000495259 FBLN2P98095 1184 aa22.2■■□□□ 1.14
CENPF-205ENST00000495259 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.14
CENPF-205ENST00000495259 EEA1Q15075 1411 aa22.2■■□□□ 1.14
CENPF-205ENST00000495259 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
CENPF-205ENST00000495259 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
CENPF-205ENST00000495259 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
CENPF-205ENST00000495259 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
CENPF-205ENST00000495259 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
CENPF-205ENST00000495259 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
CENPF-205ENST00000495259 ADAMTS12P58397 1594 aa22.06■■□□□ 1.12
CENPF-205ENST00000495259 CUL7Q14999 1698 aa22.04■■□□□ 1.12
CENPF-205ENST00000495259 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
CENPF-205ENST00000495259 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
CENPF-205ENST00000495259 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
CENPF-205ENST00000495259 CHD1O14646 1710 aa21.96■■□□□ 1.11
CENPF-205ENST00000495259 NUP160Q12769 1436 aa21.91■■□□□ 1.1
CENPF-205ENST00000495259 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
CENPF-205ENST00000495259 KIF21BO75037 1637 aa21.85■■□□□ 1.09
CENPF-205ENST00000495259 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
CENPF-205ENST00000495259 CEP170Q5SW79 1584 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms