RNA–Protein interactions for RNA: ENST00000495167.3

MEIS3P1-201, Transcript of Meis homeobox 3 pseudogene 1, humanhuman

BASIC

Gene MEIS3P1, Length 958 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1-201ENST00000495167 NISCHQ9Y2I1 1504 aa39.91■■■■□ 3.98
MEIS3P1-201ENST00000495167 ABCC9O60706 1549 aa36.66■■■■□ 3.46
MEIS3P1-201ENST00000495167 CCDC180Q9P1Z9 1646 aa36.09■■■■□ 3.37
MEIS3P1-201ENST00000495167 DNAJC5BQ9UF47 199 aa35.03■■■■□ 3.2
MEIS3P1-201ENST00000495167 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.13
MEIS3P1-201ENST00000495167 NACADO15069 1562 aa34.19■■■■□ 3.06
MEIS3P1-201ENST00000495167 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
MEIS3P1-201ENST00000495167 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.03
MEIS3P1-201ENST00000495167 BICRAQ9NZM4 1560 aa33.78■■■■□ 3
MEIS3P1-201ENST00000495167 DCAF8L2P0C7V8 631 aa33.73■■■□□ 2.99
MEIS3P1-201ENST00000495167 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
MEIS3P1-201ENST00000495167 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
MEIS3P1-201ENST00000495167 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
MEIS3P1-201ENST00000495167 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
MEIS3P1-201ENST00000495167 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
MEIS3P1-201ENST00000495167 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
MEIS3P1-201ENST00000495167 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
MEIS3P1-201ENST00000495167 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
MEIS3P1-201ENST00000495167 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
MEIS3P1-201ENST00000495167 CUX2O14529 1486 aa31.78■■■□□ 2.68
MEIS3P1-201ENST00000495167 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
MEIS3P1-201ENST00000495167 ERCC6Q03468 1493 aa31.57■■■□□ 2.64
MEIS3P1-201ENST00000495167 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.62
MEIS3P1-201ENST00000495167 NESP48681 1621 aa31.4■■■□□ 2.62
MEIS3P1-201ENST00000495167 HMGXB3Q12766 1538 aa31.32■■■□□ 2.6
MEIS3P1-201ENST00000495167 SMARCA4P51532 1647 aa31.3■■■□□ 2.6
MEIS3P1-201ENST00000495167 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
MEIS3P1-201ENST00000495167 THOC2Q8NI27 1593 aaKnown RBP31.23■■■□□ 2.59
MEIS3P1-201ENST00000495167 BAZ1BQ9UIG0 1483 aaKnown RBP31.04■■■□□ 2.56
MEIS3P1-201ENST00000495167 KIF21AQ7Z4S6 1674 aa31■■■□□ 2.55
MEIS3P1-201ENST00000495167 PEG3Q9GZU2 1588 aa31■■■□□ 2.55
MEIS3P1-201ENST00000495167 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
MEIS3P1-201ENST00000495167 LAMC3Q9Y6N6 1575 aa30.96■■■□□ 2.55
MEIS3P1-201ENST00000495167 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
MEIS3P1-201ENST00000495167 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
MEIS3P1-201ENST00000495167 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
MEIS3P1-201ENST00000495167 WDR62O43379 1518 aa30.58■■■□□ 2.49
MEIS3P1-201ENST00000495167 MRC2Q9UBG0 1479 aa30.58■■■□□ 2.49
MEIS3P1-201ENST00000495167 CADPSQ9ULU8 1353 aa30.56■■■□□ 2.48
MEIS3P1-201ENST00000495167 WIZO95785 1651 aa30.43■■■□□ 2.46
MEIS3P1-201ENST00000495167 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
MEIS3P1-201ENST00000495167 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
MEIS3P1-201ENST00000495167 CFTRP13569 1480 aa30.14■■■□□ 2.42
MEIS3P1-201ENST00000495167 URB2Q14146 1524 aaKnown RBP30.13■■■□□ 2.41
MEIS3P1-201ENST00000495167 OSCARQ8IYS5 282 aa30.13■■■□□ 2.41
MEIS3P1-201ENST00000495167 RIMBP3CA6NJZ7 1639 aa30.02■■■□□ 2.4
MEIS3P1-201ENST00000495167 RIMBP3BA6NNM3 1639 aa30.02■■■□□ 2.4
MEIS3P1-201ENST00000495167 RIMBP3Q9UFD9 1639 aa30.02■■■□□ 2.4
MEIS3P1-201ENST00000495167 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
MEIS3P1-201ENST00000495167 PRDM2Q13029 1718 aa29.89■■■□□ 2.38
MEIS3P1-201ENST00000495167 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
MEIS3P1-201ENST00000495167 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
MEIS3P1-201ENST00000495167 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
MEIS3P1-201ENST00000495167 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
MEIS3P1-201ENST00000495167 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
MEIS3P1-201ENST00000495167 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
MEIS3P1-201ENST00000495167 CHD1O14646 1710 aa29.6■■■□□ 2.33
MEIS3P1-201ENST00000495167 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
MEIS3P1-201ENST00000495167 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
MEIS3P1-201ENST00000495167 CYB5RLQ6IPT4 315 aa29.51■■■□□ 2.31
MEIS3P1-201ENST00000495167 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
MEIS3P1-201ENST00000495167 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
MEIS3P1-201ENST00000495167 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
MEIS3P1-201ENST00000495167 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
MEIS3P1-201ENST00000495167 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
MEIS3P1-201ENST00000495167 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
MEIS3P1-201ENST00000495167 RAD54L2Q9Y4B4 1467 aa29.23■■■□□ 2.27
MEIS3P1-201ENST00000495167 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
MEIS3P1-201ENST00000495167 FBLN2P98095 1184 aa29.21■■■□□ 2.27
MEIS3P1-201ENST00000495167 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
MEIS3P1-201ENST00000495167 SNAPC4Q5SXM2 1469 aa29.13■■■□□ 2.25
MEIS3P1-201ENST00000495167 SOGA1O94964 1423 aa29.08■■■□□ 2.25
MEIS3P1-201ENST00000495167 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
MEIS3P1-201ENST00000495167 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
MEIS3P1-201ENST00000495167 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
MEIS3P1-201ENST00000495167 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
MEIS3P1-201ENST00000495167 CUX1P39880 1505 aa28.97■■■□□ 2.23
MEIS3P1-201ENST00000495167 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
MEIS3P1-201ENST00000495167 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
MEIS3P1-201ENST00000495167 CHMP7Q8WUX9 453 aaPredicted RBP28.89■■■□□ 2.22
MEIS3P1-201ENST00000495167 PBRM1Q86U86 1689 aa28.89■■■□□ 2.21
MEIS3P1-201ENST00000495167 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
MEIS3P1-201ENST00000495167 AEBP2Q6ZN18 517 aaPredicted RBP28.81■■■□□ 2.2
MEIS3P1-201ENST00000495167 ERCC6L2Q5T890 1561 aa28.79■■■□□ 2.2
MEIS3P1-201ENST00000495167 ABCA5Q8WWZ7 1642 aa28.75■■■□□ 2.19
MEIS3P1-201ENST00000495167 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
MEIS3P1-201ENST00000495167 CEP170Q5SW79 1584 aa28.6■■■□□ 2.17
MEIS3P1-201ENST00000495167 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
MEIS3P1-201ENST00000495167 ADAMTS12P58397 1594 aa28.56■■■□□ 2.16
MEIS3P1-201ENST00000495167 KIF13AQ9H1H9 1805 aa28.56■■■□□ 2.16
MEIS3P1-201ENST00000495167 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
MEIS3P1-201ENST00000495167 NUP160Q12769 1436 aa28.53■■■□□ 2.16
MEIS3P1-201ENST00000495167 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
MEIS3P1-201ENST00000495167 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
MEIS3P1-201ENST00000495167 FHAD1B1AJZ9 1412 aa28.33■■■□□ 2.13
MEIS3P1-201ENST00000495167 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
MEIS3P1-201ENST00000495167 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
MEIS3P1-201ENST00000495167 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
MEIS3P1-201ENST00000495167 PRG4Q92954 1404 aaPredicted RBP28.24■■■□□ 2.11
MEIS3P1-201ENST00000495167 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms