RNA–Protein interactions for RNA: ENST00000495141.5

UBE2E1-211, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 2

Gene UBE2E1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-211ENST00000495141 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
UBE2E1-211ENST00000495141 ABCC9O60706 1549 aa34.88■■■■□ 3.17
UBE2E1-211ENST00000495141 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.12
UBE2E1-211ENST00000495141 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
UBE2E1-211ENST00000495141 RB1CC1Q8TDY2 1594 aa32.98■■■□□ 2.87
UBE2E1-211ENST00000495141 NACADO15069 1562 aa32.62■■■□□ 2.81
UBE2E1-211ENST00000495141 ZCCHC6Q5VYS8 1495 aaKnown RBP32.5■■■□□ 2.79
UBE2E1-211ENST00000495141 PABPN1Q86U42 306 aaKnown RBP eCLIP32.38■■■□□ 2.77
UBE2E1-211ENST00000495141 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
UBE2E1-211ENST00000495141 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
UBE2E1-211ENST00000495141 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
UBE2E1-211ENST00000495141 DCAF1Q9Y4B6 1507 aa32.32■■■□□ 2.76
UBE2E1-211ENST00000495141 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
UBE2E1-211ENST00000495141 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
UBE2E1-211ENST00000495141 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
UBE2E1-211ENST00000495141 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
UBE2E1-211ENST00000495141 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
UBE2E1-211ENST00000495141 EIF4G1Q04637 1599 aaKnown RBP31.3■■■□□ 2.6
UBE2E1-211ENST00000495141 DNAJC5Q9H3Z4 198 aa30.81■■■□□ 2.52
UBE2E1-211ENST00000495141 CUX2O14529 1486 aa30.25■■■□□ 2.43
UBE2E1-211ENST00000495141 ERCC6Q03468 1493 aa30.15■■■□□ 2.42
UBE2E1-211ENST00000495141 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
UBE2E1-211ENST00000495141 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
UBE2E1-211ENST00000495141 NCAPD3P42695 1498 aa30.11■■■□□ 2.41
UBE2E1-211ENST00000495141 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
UBE2E1-211ENST00000495141 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
UBE2E1-211ENST00000495141 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
UBE2E1-211ENST00000495141 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
UBE2E1-211ENST00000495141 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
UBE2E1-211ENST00000495141 NESP48681 1621 aa29.84■■■□□ 2.37
UBE2E1-211ENST00000495141 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
UBE2E1-211ENST00000495141 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
UBE2E1-211ENST00000495141 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
UBE2E1-211ENST00000495141 WIZO95785 1651 aa29.63■■■□□ 2.33
UBE2E1-211ENST00000495141 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
UBE2E1-211ENST00000495141 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
UBE2E1-211ENST00000495141 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
UBE2E1-211ENST00000495141 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
UBE2E1-211ENST00000495141 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
UBE2E1-211ENST00000495141 CADPSQ9ULU8 1353 aa29.16■■■□□ 2.26
UBE2E1-211ENST00000495141 MRC2Q9UBG0 1479 aa29.15■■■□□ 2.26
UBE2E1-211ENST00000495141 WDR62O43379 1518 aa29.11■■■□□ 2.25
UBE2E1-211ENST00000495141 SUPT5HO00267 1087 aaKnown RBP29.02■■■□□ 2.24
UBE2E1-211ENST00000495141 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
UBE2E1-211ENST00000495141 CEP164Q9UPV0 1460 aa28.93■■■□□ 2.22
UBE2E1-211ENST00000495141 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
UBE2E1-211ENST00000495141 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
UBE2E1-211ENST00000495141 CFTRP13569 1480 aa28.8■■■□□ 2.2
UBE2E1-211ENST00000495141 OSCARQ8IYS5 282 aa28.78■■■□□ 2.2
UBE2E1-211ENST00000495141 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
UBE2E1-211ENST00000495141 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
UBE2E1-211ENST00000495141 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
UBE2E1-211ENST00000495141 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
UBE2E1-211ENST00000495141 ZNF608Q9ULD9 1512 aaPredicted RBP28.39■■■□□ 2.14
UBE2E1-211ENST00000495141 IFT140Q96RY7 1462 aa28.36■■■□□ 2.13
UBE2E1-211ENST00000495141 ARHGEF11O15085 1522 aa28.35■■■□□ 2.13
UBE2E1-211ENST00000495141 TOPBP1Q92547 1522 aa28.26■■■□□ 2.11
UBE2E1-211ENST00000495141 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
UBE2E1-211ENST00000495141 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
UBE2E1-211ENST00000495141 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.1
UBE2E1-211ENST00000495141 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
UBE2E1-211ENST00000495141 CHD1O14646 1710 aa28.15■■■□□ 2.1
UBE2E1-211ENST00000495141 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
UBE2E1-211ENST00000495141 AQRO60306 1485 aaKnown RBP eCLIP28.06■■■□□ 2.082e-9■■■■□ 26.7
UBE2E1-211ENST00000495141 CUX1P39880 1505 aa28.05■■■□□ 2.08
UBE2E1-211ENST00000495141 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
UBE2E1-211ENST00000495141 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
UBE2E1-211ENST00000495141 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
UBE2E1-211ENST00000495141 TOP2BQ02880 1626 aa28■■■□□ 2.07
UBE2E1-211ENST00000495141 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
UBE2E1-211ENST00000495141 FBLN2P98095 1184 aa27.97■■■□□ 2.07
UBE2E1-211ENST00000495141 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
UBE2E1-211ENST00000495141 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
UBE2E1-211ENST00000495141 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
UBE2E1-211ENST00000495141 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
UBE2E1-211ENST00000495141 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
UBE2E1-211ENST00000495141 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
UBE2E1-211ENST00000495141 SOGA1O94964 1423 aa27.78■■■□□ 2.04
UBE2E1-211ENST00000495141 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
UBE2E1-211ENST00000495141 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
UBE2E1-211ENST00000495141 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
UBE2E1-211ENST00000495141 MAGI1Q96QZ7 1491 aaPredicted RBP27.66■■■□□ 2.02
UBE2E1-211ENST00000495141 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
UBE2E1-211ENST00000495141 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
UBE2E1-211ENST00000495141 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
UBE2E1-211ENST00000495141 SYNJ2O15056 1496 aa27.57■■■□□ 2
UBE2E1-211ENST00000495141 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
UBE2E1-211ENST00000495141 PBRM1Q86U86 1689 aa27.53■■■□□ 2
UBE2E1-211ENST00000495141 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
UBE2E1-211ENST00000495141 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
UBE2E1-211ENST00000495141 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
UBE2E1-211ENST00000495141 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
UBE2E1-211ENST00000495141 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
UBE2E1-211ENST00000495141 ADAMTS12P58397 1594 aa27.29■■□□□ 1.96
UBE2E1-211ENST00000495141 CUL7Q14999 1698 aa27.29■■□□□ 1.96
UBE2E1-211ENST00000495141 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
UBE2E1-211ENST00000495141 EEA1Q15075 1411 aa27.24■■□□□ 1.95
UBE2E1-211ENST00000495141 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
UBE2E1-211ENST00000495141 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
UBE2E1-211ENST00000495141 NUP160Q12769 1436 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms