RNA–Protein interactions for RNA: ENST00000494981.1

MTA1-215, Transcript of metastasis associated 1, humanhuman

TSL 3

Gene MTA1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-215ENST00000494981 NISCHQ9Y2I1 1504 aa36.2■■■■□ 3.39
MTA1-215ENST00000494981 ABCC9O60706 1549 aa32.37■■■□□ 2.77
MTA1-215ENST00000494981 CCDC180Q9P1Z9 1646 aa32.24■■■□□ 2.75
MTA1-215ENST00000494981 RB1CC1Q8TDY2 1594 aa30.74■■■□□ 2.51
MTA1-215ENST00000494981 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
MTA1-215ENST00000494981 NACADO15069 1562 aa30.5■■■□□ 2.47
MTA1-215ENST00000494981 DCAF8L2P0C7V8 631 aa30.38■■■□□ 2.45
MTA1-215ENST00000494981 ZCCHC6Q5VYS8 1495 aaKnown RBP30.17■■■□□ 2.42
MTA1-215ENST00000494981 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
MTA1-215ENST00000494981 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.411e-9■■□□□ 14.1
MTA1-215ENST00000494981 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
MTA1-215ENST00000494981 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
MTA1-215ENST00000494981 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
MTA1-215ENST00000494981 SHROOM4Q9ULL8 1493 aa29.39■■■□□ 2.3
MTA1-215ENST00000494981 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
MTA1-215ENST00000494981 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
MTA1-215ENST00000494981 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
MTA1-215ENST00000494981 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
MTA1-215ENST00000494981 NCAPD3P42695 1498 aa28.18■■■□□ 2.1
MTA1-215ENST00000494981 DNAJC5Q9H3Z4 198 aa28.09■■■□□ 2.09
MTA1-215ENST00000494981 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
MTA1-215ENST00000494981 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
MTA1-215ENST00000494981 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
MTA1-215ENST00000494981 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
MTA1-215ENST00000494981 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
MTA1-215ENST00000494981 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
MTA1-215ENST00000494981 CUX2O14529 1486 aa27.92■■■□□ 2.06
MTA1-215ENST00000494981 ERCC6Q03468 1493 aa27.91■■■□□ 2.06
MTA1-215ENST00000494981 NESP48681 1621 aa27.8■■■□□ 2.04
MTA1-215ENST00000494981 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
MTA1-215ENST00000494981 PEG3Q9GZU2 1588 aa27.75■■■□□ 2.03
MTA1-215ENST00000494981 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
MTA1-215ENST00000494981 WIZO95785 1651 aa27.59■■■□□ 2.01
MTA1-215ENST00000494981 LAMC3Q9Y6N6 1575 aa27.55■■■□□ 2
MTA1-215ENST00000494981 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
MTA1-215ENST00000494981 KIF21AQ7Z4S6 1674 aa27.44■■□□□ 1.98
MTA1-215ENST00000494981 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
MTA1-215ENST00000494981 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
MTA1-215ENST00000494981 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
MTA1-215ENST00000494981 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
MTA1-215ENST00000494981 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
MTA1-215ENST00000494981 WDR62O43379 1518 aa27.11■■□□□ 1.93
MTA1-215ENST00000494981 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
MTA1-215ENST00000494981 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
MTA1-215ENST00000494981 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
MTA1-215ENST00000494981 CFTRP13569 1480 aa26.98■■□□□ 1.91
MTA1-215ENST00000494981 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
MTA1-215ENST00000494981 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
MTA1-215ENST00000494981 PRDM2Q13029 1718 aa26.71■■□□□ 1.87
MTA1-215ENST00000494981 OSCARQ8IYS5 282 aa26.64■■□□□ 1.86
MTA1-215ENST00000494981 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
MTA1-215ENST00000494981 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
MTA1-215ENST00000494981 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
MTA1-215ENST00000494981 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
MTA1-215ENST00000494981 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
MTA1-215ENST00000494981 RIMBP3CA6NJZ7 1639 aa26.33■■□□□ 1.81
MTA1-215ENST00000494981 RIMBP3BA6NNM3 1639 aa26.33■■□□□ 1.81
MTA1-215ENST00000494981 RIMBP3Q9UFD9 1639 aa26.33■■□□□ 1.81
MTA1-215ENST00000494981 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.8
MTA1-215ENST00000494981 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
MTA1-215ENST00000494981 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.792e-10■■■□□ 16
MTA1-215ENST00000494981 ARHGEF11O15085 1522 aa26.22■■□□□ 1.79
MTA1-215ENST00000494981 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
MTA1-215ENST00000494981 CHD1O14646 1710 aa26.18■■□□□ 1.78
MTA1-215ENST00000494981 CUX1P39880 1505 aa26.18■■□□□ 1.78
MTA1-215ENST00000494981 RAD54L2Q9Y4B4 1467 aa26.12■■□□□ 1.77
MTA1-215ENST00000494981 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
MTA1-215ENST00000494981 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
MTA1-215ENST00000494981 SOGA1O94964 1423 aa26.07■■□□□ 1.76
MTA1-215ENST00000494981 FBLN2P98095 1184 aa26.05■■□□□ 1.76
MTA1-215ENST00000494981 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
MTA1-215ENST00000494981 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
MTA1-215ENST00000494981 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
MTA1-215ENST00000494981 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
MTA1-215ENST00000494981 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
MTA1-215ENST00000494981 SNAPC4Q5SXM2 1469 aa25.94■■□□□ 1.74
MTA1-215ENST00000494981 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
MTA1-215ENST00000494981 BIVM-ERCC5R4GMW8 1640 aa25.91■■□□□ 1.74
MTA1-215ENST00000494981 CLASP1Q7Z460 1538 aa25.86■■□□□ 1.73
MTA1-215ENST00000494981 MAGI1Q96QZ7 1491 aaPredicted RBP25.85■■□□□ 1.73
MTA1-215ENST00000494981 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
MTA1-215ENST00000494981 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
MTA1-215ENST00000494981 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
MTA1-215ENST00000494981 SYNJ2O15056 1496 aa25.78■■□□□ 1.72
MTA1-215ENST00000494981 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
MTA1-215ENST00000494981 TRHP20396 242 aaPredicted RBP25.77■■□□□ 1.72
MTA1-215ENST00000494981 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
MTA1-215ENST00000494981 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
MTA1-215ENST00000494981 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
MTA1-215ENST00000494981 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
MTA1-215ENST00000494981 ADAMTS12P58397 1594 aa25.49■■□□□ 1.67
MTA1-215ENST00000494981 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
MTA1-215ENST00000494981 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
MTA1-215ENST00000494981 CEP170Q5SW79 1584 aa25.46■■□□□ 1.67
MTA1-215ENST00000494981 NUP160Q12769 1436 aa25.46■■□□□ 1.67
MTA1-215ENST00000494981 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
MTA1-215ENST00000494981 IGF1RP08069 1367 aa25.43■■□□□ 1.66
MTA1-215ENST00000494981 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
MTA1-215ENST00000494981 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
MTA1-215ENST00000494981 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms