RNA–Protein interactions for RNA: ENST00000494808.1

AGAP3-224, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-224ENST00000494808 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
AGAP3-224ENST00000494808 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
AGAP3-224ENST00000494808 ABCC9O60706 1549 aa28.72■■■□□ 2.19
AGAP3-224ENST00000494808 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
AGAP3-224ENST00000494808 NACADO15069 1562 aa27.53■■■□□ 2
AGAP3-224ENST00000494808 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.97
AGAP3-224ENST00000494808 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
AGAP3-224ENST00000494808 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.94
AGAP3-224ENST00000494808 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
AGAP3-224ENST00000494808 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
AGAP3-224ENST00000494808 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.87
AGAP3-224ENST00000494808 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
AGAP3-224ENST00000494808 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
AGAP3-224ENST00000494808 DNAJC5BQ9UF47 199 aa26.54■■□□□ 1.84
AGAP3-224ENST00000494808 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
AGAP3-224ENST00000494808 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
AGAP3-224ENST00000494808 CC2D2AQ9P2K1 1620 aa26■■□□□ 1.75
AGAP3-224ENST00000494808 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
AGAP3-224ENST00000494808 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
AGAP3-224ENST00000494808 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
AGAP3-224ENST00000494808 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
AGAP3-224ENST00000494808 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
AGAP3-224ENST00000494808 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
AGAP3-224ENST00000494808 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
AGAP3-224ENST00000494808 PEG3Q9GZU2 1588 aa25.19■■□□□ 1.62
AGAP3-224ENST00000494808 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
AGAP3-224ENST00000494808 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
AGAP3-224ENST00000494808 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
AGAP3-224ENST00000494808 WIZO95785 1651 aa24.78■■□□□ 1.56
AGAP3-224ENST00000494808 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
AGAP3-224ENST00000494808 CUX2O14529 1486 aa24.75■■□□□ 1.55
AGAP3-224ENST00000494808 NESP48681 1621 aa24.74■■□□□ 1.55
AGAP3-224ENST00000494808 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
AGAP3-224ENST00000494808 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
AGAP3-224ENST00000494808 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
AGAP3-224ENST00000494808 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
AGAP3-224ENST00000494808 DNAJC5Q9H3Z4 198 aa24.55■■□□□ 1.52
AGAP3-224ENST00000494808 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
AGAP3-224ENST00000494808 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
AGAP3-224ENST00000494808 CFTRP13569 1480 aa24.4■■□□□ 1.5
AGAP3-224ENST00000494808 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
AGAP3-224ENST00000494808 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
AGAP3-224ENST00000494808 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
AGAP3-224ENST00000494808 WDR62O43379 1518 aa24.3■■□□□ 1.48
AGAP3-224ENST00000494808 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
AGAP3-224ENST00000494808 PRDM2Q13029 1718 aa24.19■■□□□ 1.46
AGAP3-224ENST00000494808 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
AGAP3-224ENST00000494808 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
AGAP3-224ENST00000494808 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
AGAP3-224ENST00000494808 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
AGAP3-224ENST00000494808 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
AGAP3-224ENST00000494808 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
AGAP3-224ENST00000494808 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
AGAP3-224ENST00000494808 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
AGAP3-224ENST00000494808 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
AGAP3-224ENST00000494808 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
AGAP3-224ENST00000494808 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
AGAP3-224ENST00000494808 WDR97A6NE52 1622 aa23.57■■□□□ 1.36
AGAP3-224ENST00000494808 CUX1P39880 1505 aa23.57■■□□□ 1.36
AGAP3-224ENST00000494808 SOGA1O94964 1423 aa23.55■■□□□ 1.36
AGAP3-224ENST00000494808 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
AGAP3-224ENST00000494808 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
AGAP3-224ENST00000494808 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.352e-6■□□□□ 9.7
AGAP3-224ENST00000494808 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
AGAP3-224ENST00000494808 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
AGAP3-224ENST00000494808 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
AGAP3-224ENST00000494808 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
AGAP3-224ENST00000494808 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
AGAP3-224ENST00000494808 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
AGAP3-224ENST00000494808 CHD1O14646 1710 aa23.33■■□□□ 1.33
AGAP3-224ENST00000494808 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
AGAP3-224ENST00000494808 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
AGAP3-224ENST00000494808 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
AGAP3-224ENST00000494808 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
AGAP3-224ENST00000494808 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
AGAP3-224ENST00000494808 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
AGAP3-224ENST00000494808 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
AGAP3-224ENST00000494808 RIMBP3CA6NJZ7 1639 aa23.23■■□□□ 1.31
AGAP3-224ENST00000494808 RIMBP3BA6NNM3 1639 aa23.23■■□□□ 1.31
AGAP3-224ENST00000494808 RIMBP3Q9UFD9 1639 aa23.23■■□□□ 1.31
AGAP3-224ENST00000494808 FBLN2P98095 1184 aa23.23■■□□□ 1.31
AGAP3-224ENST00000494808 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
AGAP3-224ENST00000494808 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
AGAP3-224ENST00000494808 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
AGAP3-224ENST00000494808 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
AGAP3-224ENST00000494808 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
AGAP3-224ENST00000494808 ADAMTS12P58397 1594 aa23.07■■□□□ 1.28
AGAP3-224ENST00000494808 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
AGAP3-224ENST00000494808 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
AGAP3-224ENST00000494808 ARAP1Q96P48 1450 aa23■■□□□ 1.27
AGAP3-224ENST00000494808 NUP160Q12769 1436 aa22.96■■□□□ 1.27
AGAP3-224ENST00000494808 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
AGAP3-224ENST00000494808 CEP170Q5SW79 1584 aa22.9■■□□□ 1.26
AGAP3-224ENST00000494808 KIF27Q86VH2 1401 aa22.9■■□□□ 1.26
AGAP3-224ENST00000494808 CUL7Q14999 1698 aa22.82■■□□□ 1.24
AGAP3-224ENST00000494808 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
AGAP3-224ENST00000494808 IGF1RP08069 1367 aa22.78■■□□□ 1.24
AGAP3-224ENST00000494808 RUSC2Q8N2Y8 1516 aa22.74■■□□□ 1.23
AGAP3-224ENST00000494808 ERCC6L2Q5T890 1561 aa22.7■■□□□ 1.22
AGAP3-224ENST00000494808 KIAA0586Q9BVV6 1533 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms