RNA–Protein interactions for RNA: ENST00000494549.1

ACTR1A-206, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 2

Gene ACTR1A, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-206ENST00000494549 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
ACTR1A-206ENST00000494549 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
ACTR1A-206ENST00000494549 ABCC9O60706 1549 aa18.19■□□□□ 0.5
ACTR1A-206ENST00000494549 NACADO15069 1562 aa17.57■□□□□ 0.4
ACTR1A-206ENST00000494549 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
ACTR1A-206ENST00000494549 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
ACTR1A-206ENST00000494549 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
ACTR1A-206ENST00000494549 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
ACTR1A-206ENST00000494549 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
ACTR1A-206ENST00000494549 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
ACTR1A-206ENST00000494549 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
ACTR1A-206ENST00000494549 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
ACTR1A-206ENST00000494549 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
ACTR1A-206ENST00000494549 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
ACTR1A-206ENST00000494549 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
ACTR1A-206ENST00000494549 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
ACTR1A-206ENST00000494549 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
ACTR1A-206ENST00000494549 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
ACTR1A-206ENST00000494549 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
ACTR1A-206ENST00000494549 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
ACTR1A-206ENST00000494549 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
ACTR1A-206ENST00000494549 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
ACTR1A-206ENST00000494549 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
ACTR1A-206ENST00000494549 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
ACTR1A-206ENST00000494549 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
ACTR1A-206ENST00000494549 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
ACTR1A-206ENST00000494549 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
ACTR1A-206ENST00000494549 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
ACTR1A-206ENST00000494549 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
ACTR1A-206ENST00000494549 WIZO95785 1651 aa16.02■□□□□ 0.16
ACTR1A-206ENST00000494549 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
ACTR1A-206ENST00000494549 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
ACTR1A-206ENST00000494549 NESP48681 1621 aa15.8■□□□□ 0.12
ACTR1A-206ENST00000494549 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
ACTR1A-206ENST00000494549 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
ACTR1A-206ENST00000494549 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
ACTR1A-206ENST00000494549 CFTRP13569 1480 aa15.66■□□□□ 0.1
ACTR1A-206ENST00000494549 KIF21AQ7Z4S6 1674 aa15.65■□□□□ 0.1
ACTR1A-206ENST00000494549 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
ACTR1A-206ENST00000494549 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
ACTR1A-206ENST00000494549 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
ACTR1A-206ENST00000494549 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
ACTR1A-206ENST00000494549 CUX2O14529 1486 aa15.56■□□□□ 0.08
ACTR1A-206ENST00000494549 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
ACTR1A-206ENST00000494549 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
ACTR1A-206ENST00000494549 WDR62O43379 1518 aa15.48■□□□□ 0.07
ACTR1A-206ENST00000494549 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
ACTR1A-206ENST00000494549 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
ACTR1A-206ENST00000494549 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
ACTR1A-206ENST00000494549 URB2Q14146 1524 aaKnown RBP15.41■□□□□ 0.06
ACTR1A-206ENST00000494549 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
ACTR1A-206ENST00000494549 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
ACTR1A-206ENST00000494549 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
ACTR1A-206ENST00000494549 CUX1P39880 1505 aa15.2■□□□□ 0.02
ACTR1A-206ENST00000494549 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
ACTR1A-206ENST00000494549 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
ACTR1A-206ENST00000494549 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
ACTR1A-206ENST00000494549 ZNF608Q9ULD9 1512 aaPredicted RBP15.13■□□□□ 0.01
ACTR1A-206ENST00000494549 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
ACTR1A-206ENST00000494549 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
ACTR1A-206ENST00000494549 WDR97A6NE52 1622 aa15.08■□□□□ 0
ACTR1A-206ENST00000494549 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
ACTR1A-206ENST00000494549 TOP2BQ02880 1626 aa15.07■□□□□ 0
ACTR1A-206ENST00000494549 SYNJ1O43426 1573 aa15.07■□□□□ 0
ACTR1A-206ENST00000494549 SOGA1O94964 1423 aa15.06■□□□□ 0
ACTR1A-206ENST00000494549 EIF4G3O43432 1585 aaKnown RBP15.06■□□□□ 0
ACTR1A-206ENST00000494549 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
ACTR1A-206ENST00000494549 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.01
ACTR1A-206ENST00000494549 ABCA10Q8WWZ4 1543 aa15□□□□□ -0.01
ACTR1A-206ENST00000494549 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
ACTR1A-206ENST00000494549 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
ACTR1A-206ENST00000494549 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
ACTR1A-206ENST00000494549 CHD1O14646 1710 aa14.89□□□□□ -0.03
ACTR1A-206ENST00000494549 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
ACTR1A-206ENST00000494549 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
ACTR1A-206ENST00000494549 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
ACTR1A-206ENST00000494549 SNAPC4Q5SXM2 1469 aa14.85□□□□□ -0.03
ACTR1A-206ENST00000494549 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
ACTR1A-206ENST00000494549 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
ACTR1A-206ENST00000494549 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
ACTR1A-206ENST00000494549 ADAMTS12P58397 1594 aa14.78□□□□□ -0.04
ACTR1A-206ENST00000494549 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
ACTR1A-206ENST00000494549 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
ACTR1A-206ENST00000494549 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
ACTR1A-206ENST00000494549 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
ACTR1A-206ENST00000494549 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
ACTR1A-206ENST00000494549 IGF1RP08069 1367 aa14.73□□□□□ -0.05
ACTR1A-206ENST00000494549 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
ACTR1A-206ENST00000494549 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
ACTR1A-206ENST00000494549 NUP160Q12769 1436 aa14.7□□□□□ -0.06
ACTR1A-206ENST00000494549 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
ACTR1A-206ENST00000494549 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
ACTR1A-206ENST00000494549 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
ACTR1A-206ENST00000494549 ARHGEF11O15085 1522 aa14.67□□□□□ -0.06
ACTR1A-206ENST00000494549 CUL7Q14999 1698 aa14.66□□□□□ -0.06
ACTR1A-206ENST00000494549 FBLN2P98095 1184 aa14.66□□□□□ -0.06
ACTR1A-206ENST00000494549 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
ACTR1A-206ENST00000494549 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
ACTR1A-206ENST00000494549 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
ACTR1A-206ENST00000494549 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms