RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
LINC02008-202ENST00000494340 CCDC180Q9P1Z9 1646 aa21.79■■□□□ 1.08
LINC02008-202ENST00000494340 ABCC9O60706 1549 aa21.53■■□□□ 1.04
LINC02008-202ENST00000494340 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
LINC02008-202ENST00000494340 NACADO15069 1562 aa20.56■□□□□ 0.88
LINC02008-202ENST00000494340 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
LINC02008-202ENST00000494340 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
LINC02008-202ENST00000494340 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
LINC02008-202ENST00000494340 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
LINC02008-202ENST00000494340 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
LINC02008-202ENST00000494340 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
LINC02008-202ENST00000494340 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
LINC02008-202ENST00000494340 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
LINC02008-202ENST00000494340 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
LINC02008-202ENST00000494340 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
LINC02008-202ENST00000494340 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.71
LINC02008-202ENST00000494340 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
LINC02008-202ENST00000494340 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
LINC02008-202ENST00000494340 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
LINC02008-202ENST00000494340 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
LINC02008-202ENST00000494340 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
LINC02008-202ENST00000494340 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
LINC02008-202ENST00000494340 HMGXB3Q12766 1538 aa18.85■□□□□ 0.61
LINC02008-202ENST00000494340 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
LINC02008-202ENST00000494340 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
LINC02008-202ENST00000494340 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
LINC02008-202ENST00000494340 CUX2O14529 1486 aa18.65■□□□□ 0.58
LINC02008-202ENST00000494340 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
LINC02008-202ENST00000494340 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
LINC02008-202ENST00000494340 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
LINC02008-202ENST00000494340 NESP48681 1621 aa18.52■□□□□ 0.55
LINC02008-202ENST00000494340 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
LINC02008-202ENST00000494340 WIZO95785 1651 aa18.41■□□□□ 0.54
LINC02008-202ENST00000494340 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
LINC02008-202ENST00000494340 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
LINC02008-202ENST00000494340 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
LINC02008-202ENST00000494340 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
LINC02008-202ENST00000494340 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
LINC02008-202ENST00000494340 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
LINC02008-202ENST00000494340 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
LINC02008-202ENST00000494340 WDR62O43379 1518 aa18.19■□□□□ 0.5
LINC02008-202ENST00000494340 CFTRP13569 1480 aa18.19■□□□□ 0.5
LINC02008-202ENST00000494340 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
LINC02008-202ENST00000494340 FANCD2Q9BXW9 1451 aa18.13■□□□□ 0.49
LINC02008-202ENST00000494340 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
LINC02008-202ENST00000494340 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
LINC02008-202ENST00000494340 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
LINC02008-202ENST00000494340 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
LINC02008-202ENST00000494340 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
LINC02008-202ENST00000494340 TOPBP1Q92547 1522 aa17.8■□□□□ 0.44
LINC02008-202ENST00000494340 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
LINC02008-202ENST00000494340 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
LINC02008-202ENST00000494340 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
LINC02008-202ENST00000494340 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
LINC02008-202ENST00000494340 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
LINC02008-202ENST00000494340 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
LINC02008-202ENST00000494340 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
LINC02008-202ENST00000494340 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
LINC02008-202ENST00000494340 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC02008-202ENST00000494340 SOGA1O94964 1423 aa17.53■□□□□ 0.4
LINC02008-202ENST00000494340 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
LINC02008-202ENST00000494340 CUX1P39880 1505 aa17.51■□□□□ 0.39
LINC02008-202ENST00000494340 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
LINC02008-202ENST00000494340 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
LINC02008-202ENST00000494340 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
LINC02008-202ENST00000494340 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
LINC02008-202ENST00000494340 CHD1O14646 1710 aa17.49■□□□□ 0.39
LINC02008-202ENST00000494340 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
LINC02008-202ENST00000494340 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
LINC02008-202ENST00000494340 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
LINC02008-202ENST00000494340 MAGI1Q96QZ7 1491 aaPredicted RBP17.42■□□□□ 0.38
LINC02008-202ENST00000494340 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
LINC02008-202ENST00000494340 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
LINC02008-202ENST00000494340 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
LINC02008-202ENST00000494340 FBLN2P98095 1184 aa17.35■□□□□ 0.37
LINC02008-202ENST00000494340 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
LINC02008-202ENST00000494340 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
LINC02008-202ENST00000494340 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
LINC02008-202ENST00000494340 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
LINC02008-202ENST00000494340 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.37
LINC02008-202ENST00000494340 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
LINC02008-202ENST00000494340 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
LINC02008-202ENST00000494340 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
LINC02008-202ENST00000494340 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
LINC02008-202ENST00000494340 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
LINC02008-202ENST00000494340 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
LINC02008-202ENST00000494340 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
LINC02008-202ENST00000494340 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
LINC02008-202ENST00000494340 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
LINC02008-202ENST00000494340 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
LINC02008-202ENST00000494340 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
LINC02008-202ENST00000494340 NUP160Q12769 1436 aa17.13■□□□□ 0.33
LINC02008-202ENST00000494340 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
LINC02008-202ENST00000494340 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
LINC02008-202ENST00000494340 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
LINC02008-202ENST00000494340 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
LINC02008-202ENST00000494340 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
LINC02008-202ENST00000494340 CUL7Q14999 1698 aa16.94■□□□□ 0.3
LINC02008-202ENST00000494340 RUSC2Q8N2Y8 1516 aa16.94■□□□□ 0.3
LINC02008-202ENST00000494340 IGF1RP08069 1367 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms