RNA–Protein interactions for RNA: ENST00000493667.1

LMO2-206, Transcript of LIM domain only 2, humanhuman

TSL 3

Gene LMO2, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-206ENST00000493667 NISCHQ9Y2I1 1504 aa47.79■■■■■ 5.24
LMO2-206ENST00000493667 CCDC180Q9P1Z9 1646 aa42.98■■■■■ 4.47
LMO2-206ENST00000493667 ABCC9O60706 1549 aa42.76■■■■■ 4.44
LMO2-206ENST00000493667 RB1CC1Q8TDY2 1594 aa40.75■■■■■ 4.11
LMO2-206ENST00000493667 NACADO15069 1562 aa40.48■■■■■ 4.07
LMO2-206ENST00000493667 UNC13AQ9UPW8 1703 aa40.13■■■■■ 4.01
LMO2-206ENST00000493667 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4.01
LMO2-206ENST00000493667 DNAJC5BQ9UF47 199 aa39.97■■■■□ 3.99
LMO2-206ENST00000493667 MYO15BQ96JP2 1530 aa39.91■■■■□ 3.98
LMO2-206ENST00000493667 PABPN1Q86U42 306 aaKnown RBP eCLIP39.71■■■■□ 3.95
LMO2-206ENST00000493667 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
LMO2-206ENST00000493667 BICRAQ9NZM4 1560 aa39.67■■■■□ 3.94
LMO2-206ENST00000493667 DCAF1Q9Y4B6 1507 aa39.46■■■■□ 3.91
LMO2-206ENST00000493667 SCRIBQ14160 1630 aa39.15■■■■□ 3.86
LMO2-206ENST00000493667 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
LMO2-206ENST00000493667 CC2D2AQ9P2K1 1620 aa38.71■■■■□ 3.79
LMO2-206ENST00000493667 EIF4G1Q04637 1599 aaKnown RBP38.62■■■■□ 3.77
LMO2-206ENST00000493667 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
LMO2-206ENST00000493667 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
LMO2-206ENST00000493667 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
LMO2-206ENST00000493667 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
LMO2-206ENST00000493667 SMARCA2P51531 1590 aa37.16■■■■□ 3.54
LMO2-206ENST00000493667 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
LMO2-206ENST00000493667 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
LMO2-206ENST00000493667 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
LMO2-206ENST00000493667 BAZ1BQ9UIG0 1483 aaKnown RBP36.89■■■■□ 3.5
LMO2-206ENST00000493667 MROH2BQ7Z745 1585 aa36.87■■■■□ 3.49
LMO2-206ENST00000493667 ERCC6Q03468 1493 aa36.84■■■■□ 3.49
LMO2-206ENST00000493667 NESP48681 1621 aa36.81■■■■□ 3.48
LMO2-206ENST00000493667 CUX2O14529 1486 aa36.76■■■■□ 3.48
LMO2-206ENST00000493667 LAMC3Q9Y6N6 1575 aa36.53■■■■□ 3.44
LMO2-206ENST00000493667 DNAJC5Q9H3Z4 198 aa36.53■■■■□ 3.44
LMO2-206ENST00000493667 WIZO95785 1651 aa36.51■■■■□ 3.44
LMO2-206ENST00000493667 THOC2Q8NI27 1593 aaKnown RBP36.51■■■■□ 3.44
LMO2-206ENST00000493667 KIF21AQ7Z4S6 1674 aa36.48■■■■□ 3.43
LMO2-206ENST00000493667 PDS5BQ9NTI5 1447 aa36.17■■■■□ 3.38
LMO2-206ENST00000493667 CADPSQ9ULU8 1353 aa36.14■■■■□ 3.38
LMO2-206ENST00000493667 RSF1Q96T23 1441 aaPredicted RBP36.06■■■■□ 3.36
LMO2-206ENST00000493667 TOP2AP11388 1531 aaKnown RBP35.98■■■■□ 3.35
LMO2-206ENST00000493667 MRC2Q9UBG0 1479 aa35.97■■■■□ 3.35
LMO2-206ENST00000493667 WDR62O43379 1518 aa35.94■■■■□ 3.34
LMO2-206ENST00000493667 CEP164Q9UPV0 1460 aa35.84■■■■□ 3.33
LMO2-206ENST00000493667 CFTRP13569 1480 aa35.8■■■■□ 3.32
LMO2-206ENST00000493667 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
LMO2-206ENST00000493667 PRDM2Q13029 1718 aa35.76■■■■□ 3.31
LMO2-206ENST00000493667 URB2Q14146 1524 aaKnown RBP35.57■■■■□ 3.29
LMO2-206ENST00000493667 CCDC88BA6NC98 1476 aa35.5■■■■□ 3.27
LMO2-206ENST00000493667 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
LMO2-206ENST00000493667 ZNF608Q9ULD9 1512 aaPredicted RBP35.11■■■■□ 3.21
LMO2-206ENST00000493667 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
LMO2-206ENST00000493667 IFT140Q96RY7 1462 aa35.08■■■■□ 3.21
LMO2-206ENST00000493667 EIF4G3O43432 1585 aaKnown RBP35.01■■■■□ 3.2
LMO2-206ENST00000493667 TRIM41Q8WV44 630 aa34.99■■■■□ 3.19
LMO2-206ENST00000493667 ABCC8Q09428 1581 aa34.99■■■■□ 3.19
LMO2-206ENST00000493667 OSCARQ8IYS5 282 aa34.95■■■■□ 3.19
LMO2-206ENST00000493667 TARBP1Q13395 1621 aaKnown RBP34.94■■■■□ 3.18
LMO2-206ENST00000493667 POLA1P09884 1462 aaPredicted RBP34.82■■■■□ 3.16
LMO2-206ENST00000493667 CHD1O14646 1710 aa34.81■■■■□ 3.16
LMO2-206ENST00000493667 RIMBP3CA6NJZ7 1639 aa34.78■■■■□ 3.16
LMO2-206ENST00000493667 RIMBP3BA6NNM3 1639 aa34.78■■■■□ 3.16
LMO2-206ENST00000493667 RIMBP3Q9UFD9 1639 aa34.78■■■■□ 3.16
LMO2-206ENST00000493667 AQRO60306 1485 aaKnown RBP eCLIP34.72■■■■□ 3.151e-10■■■□□ 17.8
LMO2-206ENST00000493667 RAD54L2Q9Y4B4 1467 aa34.68■■■■□ 3.14
LMO2-206ENST00000493667 CUX1P39880 1505 aa34.65■■■■□ 3.14
LMO2-206ENST00000493667 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
LMO2-206ENST00000493667 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
LMO2-206ENST00000493667 WDR97A6NE52 1622 aa34.56■■■■□ 3.12
LMO2-206ENST00000493667 SOGA1O94964 1423 aa34.55■■■■□ 3.12
LMO2-206ENST00000493667 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
LMO2-206ENST00000493667 SNAPC4Q5SXM2 1469 aa34.43■■■■□ 3.1
LMO2-206ENST00000493667 SUPT5HO00267 1087 aaKnown RBP34.41■■■■□ 3.1
LMO2-206ENST00000493667 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
LMO2-206ENST00000493667 FBLN2P98095 1184 aa34.35■■■■□ 3.09
LMO2-206ENST00000493667 MAGI1Q96QZ7 1491 aaPredicted RBP34.3■■■■□ 3.08
LMO2-206ENST00000493667 CLASP1Q7Z460 1538 aa34.3■■■■□ 3.08
LMO2-206ENST00000493667 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
LMO2-206ENST00000493667 ARAP1Q96P48 1450 aa34.28■■■■□ 3.08
LMO2-206ENST00000493667 ABCA5Q8WWZ7 1642 aa34.27■■■■□ 3.08
LMO2-206ENST00000493667 SYNJ1O43426 1573 aa34.22■■■■□ 3.07
LMO2-206ENST00000493667 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.07
LMO2-206ENST00000493667 GAPVD1Q14C86 1478 aa34.19■■■■□ 3.06
LMO2-206ENST00000493667 BIVM-ERCC5R4GMW8 1640 aa34.19■■■■□ 3.06
LMO2-206ENST00000493667 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
LMO2-206ENST00000493667 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
LMO2-206ENST00000493667 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
LMO2-206ENST00000493667 CHMP7Q8WUX9 453 aaPredicted RBP34.1■■■■□ 3.05
LMO2-206ENST00000493667 ADAMTS12P58397 1594 aa33.99■■■■□ 3.03
LMO2-206ENST00000493667 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.031e-7■■■□□ 15.3
LMO2-206ENST00000493667 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
LMO2-206ENST00000493667 CEP170Q5SW79 1584 aa33.86■■■■□ 3.01
LMO2-206ENST00000493667 ERCC6L2Q5T890 1561 aa33.81■■■■□ 3
LMO2-206ENST00000493667 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
LMO2-206ENST00000493667 NUP160Q12769 1436 aa33.77■■■■□ 3
LMO2-206ENST00000493667 FHAD1B1AJZ9 1412 aa33.73■■■□□ 2.99
LMO2-206ENST00000493667 SHROOM2Q13796 1616 aa33.73■■■□□ 2.99
LMO2-206ENST00000493667 TRHP20396 242 aaPredicted RBP33.73■■■□□ 2.99
LMO2-206ENST00000493667 RUSC2Q8N2Y8 1516 aa33.53■■■□□ 2.96
LMO2-206ENST00000493667 CUL7Q14999 1698 aa33.39■■■□□ 2.94
LMO2-206ENST00000493667 PRG4Q92954 1404 aaPredicted RBP33.37■■■□□ 2.93
LMO2-206ENST00000493667 KIF13AQ9H1H9 1805 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms