RNA–Protein interactions for RNA: ENST00000493646.1

MRPL43-213, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 1 (best)

Gene MRPL43, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-213ENST00000493646 NISCHQ9Y2I1 1504 aa45.01■■■■■ 4.8
MRPL43-213ENST00000493646 ABCC9O60706 1549 aa40.88■■■■■ 4.14
MRPL43-213ENST00000493646 CCDC180Q9P1Z9 1646 aa40.56■■■■■ 4.08
MRPL43-213ENST00000493646 RB1CC1Q8TDY2 1594 aa38.74■■■■□ 3.79
MRPL43-213ENST00000493646 DNAJC5BQ9UF47 199 aa38.4■■■■□ 3.74
MRPL43-213ENST00000493646 NACADO15069 1562 aa38.35■■■■□ 3.73
MRPL43-213ENST00000493646 DCAF8L2P0C7V8 631 aa38.3■■■■□ 3.72
MRPL43-213ENST00000493646 PABPN1Q86U42 306 aaKnown RBP eCLIP37.99■■■■□ 3.67
MRPL43-213ENST00000493646 UNC13AQ9UPW8 1703 aa37.95■■■■□ 3.67
MRPL43-213ENST00000493646 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
MRPL43-213ENST00000493646 BICRAQ9NZM4 1560 aa37.57■■■■□ 3.6
MRPL43-213ENST00000493646 ZCCHC6Q5VYS8 1495 aaKnown RBP37.26■■■■□ 3.56
MRPL43-213ENST00000493646 DCAF1Q9Y4B6 1507 aa37.08■■■■□ 3.53
MRPL43-213ENST00000493646 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
MRPL43-213ENST00000493646 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
MRPL43-213ENST00000493646 CC2D2AQ9P2K1 1620 aa36.88■■■■□ 3.5
MRPL43-213ENST00000493646 CECR2Q9BXF3 1484 aa36.79■■■■□ 3.48
MRPL43-213ENST00000493646 EIF4G1Q04637 1599 aaKnown RBP36.72■■■■□ 3.47
MRPL43-213ENST00000493646 DNAJC5Q9H3Z4 198 aa35.43■■■■□ 3.26
MRPL43-213ENST00000493646 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
MRPL43-213ENST00000493646 NCAPD3P42695 1498 aa35.34■■■■□ 3.25
MRPL43-213ENST00000493646 ATAD2BQ9ULI0 1458 aa35.26■■■■□ 3.23
MRPL43-213ENST00000493646 SMARCA4P51532 1647 aa35.24■■■■□ 3.23
MRPL43-213ENST00000493646 CUX2O14529 1486 aa35.22■■■■□ 3.23
MRPL43-213ENST00000493646 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
MRPL43-213ENST00000493646 HMGXB3Q12766 1538 aa35.13■■■■□ 3.21
MRPL43-213ENST00000493646 NESP48681 1621 aa35.02■■■■□ 3.2
MRPL43-213ENST00000493646 BAZ1BQ9UIG0 1483 aaKnown RBP35■■■■□ 3.19
MRPL43-213ENST00000493646 BAZ1AQ9NRL2 1556 aaPredicted RBP35■■■■□ 3.19
MRPL43-213ENST00000493646 PEG3Q9GZU2 1588 aa34.78■■■■□ 3.16
MRPL43-213ENST00000493646 MROH2BQ7Z745 1585 aa34.72■■■■□ 3.15
MRPL43-213ENST00000493646 THOC2Q8NI27 1593 aaKnown RBP34.7■■■■□ 3.15
MRPL43-213ENST00000493646 LAMC3Q9Y6N6 1575 aa34.69■■■■□ 3.14
MRPL43-213ENST00000493646 KIF21AQ7Z4S6 1674 aa34.64■■■■□ 3.14
MRPL43-213ENST00000493646 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
MRPL43-213ENST00000493646 WIZO95785 1651 aa34.38■■■■□ 3.09
MRPL43-213ENST00000493646 CADPSQ9ULU8 1353 aa34.29■■■■□ 3.08
MRPL43-213ENST00000493646 MRC2Q9UBG0 1479 aa34.23■■■■□ 3.07
MRPL43-213ENST00000493646 WDR62O43379 1518 aa34.13■■■■□ 3.05
MRPL43-213ENST00000493646 CEP164Q9UPV0 1460 aa34.08■■■■□ 3.05
MRPL43-213ENST00000493646 TRIM41Q8WV44 630 aa34.02■■■■□ 3.04
MRPL43-213ENST00000493646 FANCD2Q9BXW9 1451 aa33.99■■■■□ 3.03
MRPL43-213ENST00000493646 TOP2AP11388 1531 aaKnown RBP33.86■■■■□ 3.01
MRPL43-213ENST00000493646 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
MRPL43-213ENST00000493646 CFTRP13569 1480 aa33.85■■■■□ 3.01
MRPL43-213ENST00000493646 URB2Q14146 1524 aaKnown RBP33.71■■■□□ 2.99
MRPL43-213ENST00000493646 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
MRPL43-213ENST00000493646 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
MRPL43-213ENST00000493646 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
MRPL43-213ENST00000493646 ZNF608Q9ULD9 1512 aaPredicted RBP33.35■■■□□ 2.93
MRPL43-213ENST00000493646 IFT140Q96RY7 1462 aa33.34■■■□□ 2.93
MRPL43-213ENST00000493646 TOPBP1Q92547 1522 aa33.31■■■□□ 2.92
MRPL43-213ENST00000493646 RIMBP3CA6NJZ7 1639 aa33.27■■■□□ 2.92
MRPL43-213ENST00000493646 RIMBP3BA6NNM3 1639 aa33.27■■■□□ 2.92
MRPL43-213ENST00000493646 RIMBP3Q9UFD9 1639 aa33.27■■■□□ 2.92
MRPL43-213ENST00000493646 EIF4G3O43432 1585 aaKnown RBP33.22■■■□□ 2.91
MRPL43-213ENST00000493646 DNMBPQ6XZF7 1577 aa33.18■■■□□ 2.9
MRPL43-213ENST00000493646 ABCC8Q09428 1581 aa33.17■■■□□ 2.9
MRPL43-213ENST00000493646 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
MRPL43-213ENST00000493646 CHD1O14646 1710 aa33.08■■■□□ 2.89
MRPL43-213ENST00000493646 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
MRPL43-213ENST00000493646 AQRO60306 1485 aaKnown RBP eCLIP33.02■■■□□ 2.885e-8■■■■□ 19.3
MRPL43-213ENST00000493646 FBLN2P98095 1184 aa32.96■■■□□ 2.87
MRPL43-213ENST00000493646 POLA1P09884 1462 aaPredicted RBP32.95■■■□□ 2.87
MRPL43-213ENST00000493646 CYB5RLQ6IPT4 315 aa32.89■■■□□ 2.86
MRPL43-213ENST00000493646 RAD54L2Q9Y4B4 1467 aa32.86■■■□□ 2.85
MRPL43-213ENST00000493646 SOGA1O94964 1423 aa32.78■■■□□ 2.84
MRPL43-213ENST00000493646 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
MRPL43-213ENST00000493646 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
MRPL43-213ENST00000493646 ARAP1Q96P48 1450 aa32.74■■■□□ 2.83
MRPL43-213ENST00000493646 SNAPC4Q5SXM2 1469 aa32.71■■■□□ 2.83
MRPL43-213ENST00000493646 TRHP20396 242 aaPredicted RBP32.69■■■□□ 2.82
MRPL43-213ENST00000493646 CUX1P39880 1505 aa32.65■■■□□ 2.82
MRPL43-213ENST00000493646 WDR97A6NE52 1622 aa32.63■■■□□ 2.81
MRPL43-213ENST00000493646 CHMP7Q8WUX9 453 aaPredicted RBP32.59■■■□□ 2.81
MRPL43-213ENST00000493646 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
MRPL43-213ENST00000493646 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
MRPL43-213ENST00000493646 CLASP1Q7Z460 1538 aa32.54■■■□□ 2.8
MRPL43-213ENST00000493646 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
MRPL43-213ENST00000493646 PBRM1Q86U86 1689 aa32.53■■■□□ 2.8
MRPL43-213ENST00000493646 SYNJ2O15056 1496 aa32.45■■■□□ 2.79
MRPL43-213ENST00000493646 GAPVD1Q14C86 1478 aa32.41■■■□□ 2.78
MRPL43-213ENST00000493646 SUPT5HO00267 1087 aaKnown RBP32.36■■■□□ 2.77
MRPL43-213ENST00000493646 ABCA5Q8WWZ7 1642 aa32.32■■■□□ 2.76
MRPL43-213ENST00000493646 ABCA10Q8WWZ4 1543 aa32.28■■■□□ 2.76
MRPL43-213ENST00000493646 GRIN2AQ12879 1464 aa32.14■■■□□ 2.74
MRPL43-213ENST00000493646 WRNQ14191 1432 aaPredicted RBP eCLIP32.13■■■□□ 2.73
MRPL43-213ENST00000493646 ADAMTS12P58397 1594 aa32.12■■■□□ 2.73
MRPL43-213ENST00000493646 BIVM-ERCC5R4GMW8 1640 aa32.08■■■□□ 2.73
MRPL43-213ENST00000493646 ERCC6L2Q5T890 1561 aa32.08■■■□□ 2.73
MRPL43-213ENST00000493646 TOP2BQ02880 1626 aa32.06■■■□□ 2.72
MRPL43-213ENST00000493646 CEP170Q5SW79 1584 aa32.06■■■□□ 2.72
MRPL43-213ENST00000493646 NUP160Q12769 1436 aa31.97■■■□□ 2.71
MRPL43-213ENST00000493646 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
MRPL43-213ENST00000493646 AEBP2Q6ZN18 517 aaPredicted RBP31.94■■■□□ 2.7
MRPL43-213ENST00000493646 ERICH3Q5RHP9 1530 aa31.9■■■□□ 2.7
MRPL43-213ENST00000493646 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
MRPL43-213ENST00000493646 PRG4Q92954 1404 aaPredicted RBP31.75■■■□□ 2.67
MRPL43-213ENST00000493646 KIF13AQ9H1H9 1805 aa31.7■■■□□ 2.67
MRPL43-213ENST00000493646 RUSC2Q8N2Y8 1516 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms