RNA–Protein interactions for RNA: ENST00000493258.1

RINT1-207, Transcript of RAD50 interactor 1, humanhuman

TSL 2

Gene RINT1, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RINT1-207ENST00000493258 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
RINT1-207ENST00000493258 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
RINT1-207ENST00000493258 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
RINT1-207ENST00000493258 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
RINT1-207ENST00000493258 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
RINT1-207ENST00000493258 FOXD1Q16676 465 aa22.93■■□□□ 1.26
RINT1-207ENST00000493258 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
RINT1-207ENST00000493258 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
RINT1-207ENST00000493258 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
RINT1-207ENST00000493258 ABCC9O60706 1549 aa21.51■■□□□ 1.03
RINT1-207ENST00000493258 ADRA2BP18089 450 aa21.51■■□□□ 1.03
RINT1-207ENST00000493258 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
RINT1-207ENST00000493258 MSH5O43196 834 aa21.45■■□□□ 1.02
RINT1-207ENST00000493258 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
RINT1-207ENST00000493258 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
RINT1-207ENST00000493258 NACADO15069 1562 aa20.4■□□□□ 0.86
RINT1-207ENST00000493258 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
RINT1-207ENST00000493258 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
RINT1-207ENST00000493258 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
RINT1-207ENST00000493258 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
RINT1-207ENST00000493258 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
RINT1-207ENST00000493258 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
RINT1-207ENST00000493258 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
RINT1-207ENST00000493258 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
RINT1-207ENST00000493258 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
RINT1-207ENST00000493258 SHROOM4Q9ULL8 1493 aa19.69■□□□□ 0.74
RINT1-207ENST00000493258 MAPK8IP2Q13387 824 aaPredicted RBP19.67■□□□□ 0.74
RINT1-207ENST00000493258 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
RINT1-207ENST00000493258 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
RINT1-207ENST00000493258 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
RINT1-207ENST00000493258 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
RINT1-207ENST00000493258 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
RINT1-207ENST00000493258 CECR2Q9BXF3 1484 aa19.39■□□□□ 0.69
RINT1-207ENST00000493258 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
RINT1-207ENST00000493258 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
RINT1-207ENST00000493258 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.61
RINT1-207ENST00000493258 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
RINT1-207ENST00000493258 NCAPD3P42695 1498 aa18.85■□□□□ 0.61
RINT1-207ENST00000493258 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
RINT1-207ENST00000493258 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
RINT1-207ENST00000493258 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
RINT1-207ENST00000493258 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
RINT1-207ENST00000493258 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
RINT1-207ENST00000493258 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
RINT1-207ENST00000493258 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
RINT1-207ENST00000493258 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
RINT1-207ENST00000493258 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
RINT1-207ENST00000493258 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
RINT1-207ENST00000493258 NPM3O75607 178 aaKnown RBP18.52■□□□□ 0.56
RINT1-207ENST00000493258 CUX2O14529 1486 aa18.52■□□□□ 0.55
RINT1-207ENST00000493258 NESP48681 1621 aa18.49■□□□□ 0.55
RINT1-207ENST00000493258 DNAJC5Q9H3Z4 198 aa18.43■□□□□ 0.54
RINT1-207ENST00000493258 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
RINT1-207ENST00000493258 KCNA4P22459 653 aa18.33■□□□□ 0.52
RINT1-207ENST00000493258 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
RINT1-207ENST00000493258 WIZO95785 1651 aa18.31■□□□□ 0.52
RINT1-207ENST00000493258 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
RINT1-207ENST00000493258 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
RINT1-207ENST00000493258 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
RINT1-207ENST00000493258 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
RINT1-207ENST00000493258 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
RINT1-207ENST00000493258 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
RINT1-207ENST00000493258 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
RINT1-207ENST00000493258 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
RINT1-207ENST00000493258 CFTRP13569 1480 aa18.09■□□□□ 0.49
RINT1-207ENST00000493258 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
RINT1-207ENST00000493258 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
RINT1-207ENST00000493258 WDR62O43379 1518 aa18.07■□□□□ 0.48
RINT1-207ENST00000493258 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
RINT1-207ENST00000493258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.484e-9■■■□□ 15.2
RINT1-207ENST00000493258 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
RINT1-207ENST00000493258 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
RINT1-207ENST00000493258 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
RINT1-207ENST00000493258 IFT140Q96RY7 1462 aa17.73■□□□□ 0.43
RINT1-207ENST00000493258 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
RINT1-207ENST00000493258 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
RINT1-207ENST00000493258 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
RINT1-207ENST00000493258 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
RINT1-207ENST00000493258 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
RINT1-207ENST00000493258 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
RINT1-207ENST00000493258 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
RINT1-207ENST00000493258 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
RINT1-207ENST00000493258 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
RINT1-207ENST00000493258 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
RINT1-207ENST00000493258 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
RINT1-207ENST00000493258 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
RINT1-207ENST00000493258 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
RINT1-207ENST00000493258 SOGA1O94964 1423 aa17.5■□□□□ 0.39
RINT1-207ENST00000493258 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
RINT1-207ENST00000493258 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
RINT1-207ENST00000493258 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
RINT1-207ENST00000493258 CUX1P39880 1505 aa17.44■□□□□ 0.38
RINT1-207ENST00000493258 FBLN2P98095 1184 aa17.44■□□□□ 0.38
RINT1-207ENST00000493258 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
RINT1-207ENST00000493258 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
RINT1-207ENST00000493258 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
RINT1-207ENST00000493258 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
RINT1-207ENST00000493258 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
RINT1-207ENST00000493258 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
RINT1-207ENST00000493258 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms