RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 NISCHQ9Y2I1 1504 aa49.07■■■■■ 5.45
RFC2-210ENST00000493156 CCDC180Q9P1Z9 1646 aa43.99■■■■■ 4.63
RFC2-210ENST00000493156 ABCC9O60706 1549 aa43.52■■■■■ 4.56
RFC2-210ENST00000493156 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
RFC2-210ENST00000493156 NACADO15069 1562 aa41.46■■■■■ 4.23
RFC2-210ENST00000493156 MYO15BQ96JP2 1530 aa41.05■■■■■ 4.16
RFC2-210ENST00000493156 DCAF8L2P0C7V8 631 aa41.02■■■■■ 4.16
RFC2-210ENST00000493156 ZCCHC6Q5VYS8 1495 aaKnown RBP40.77■■■■■ 4.12
RFC2-210ENST00000493156 UNC13AQ9UPW8 1703 aa40.74■■■■■ 4.11
RFC2-210ENST00000493156 DCAF1Q9Y4B6 1507 aa40.62■■■■■ 4.09
RFC2-210ENST00000493156 DNAJC5BQ9UF47 199 aa40.51■■■■■ 4.08
RFC2-210ENST00000493156 PABPN1Q86U42 306 aaKnown RBP eCLIP40.48■■■■■ 4.07
RFC2-210ENST00000493156 BICRAQ9NZM4 1560 aa40.44■■■■■ 4.06
RFC2-210ENST00000493156 SHROOM4Q9ULL8 1493 aa40■■■■□ 3.99
RFC2-210ENST00000493156 SCRIBQ14160 1630 aa39.98■■■■□ 3.99
RFC2-210ENST00000493156 EIF4G1Q04637 1599 aaKnown RBP39.41■■■■□ 3.9
RFC2-210ENST00000493156 CC2D2AQ9P2K1 1620 aa39.39■■■■□ 3.9
RFC2-210ENST00000493156 CECR2Q9BXF3 1484 aa39.19■■■■□ 3.86
RFC2-210ENST00000493156 NCAPD3P42695 1498 aa38.25■■■■□ 3.71
RFC2-210ENST00000493156 SMARCA4P51532 1647 aa38.23■■■■□ 3.71
RFC2-210ENST00000493156 ATAD2BQ9ULI0 1458 aa38.16■■■■□ 3.7
RFC2-210ENST00000493156 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
RFC2-210ENST00000493156 BAZ1AQ9NRL2 1556 aaPredicted RBP38.08■■■■□ 3.69
RFC2-210ENST00000493156 HMGXB3Q12766 1538 aa38.04■■■■□ 3.68
RFC2-210ENST00000493156 PEG3Q9GZU2 1588 aa37.91■■■■□ 3.66
RFC2-210ENST00000493156 MROH2BQ7Z745 1585 aa37.79■■■■□ 3.64
RFC2-210ENST00000493156 BAZ1BQ9UIG0 1483 aaKnown RBP37.78■■■■□ 3.64
RFC2-210ENST00000493156 ERCC6Q03468 1493 aa37.54■■■■□ 3.6
RFC2-210ENST00000493156 NESP48681 1621 aa37.49■■■■□ 3.59
RFC2-210ENST00000493156 CUX2O14529 1486 aa37.46■■■■□ 3.59
RFC2-210ENST00000493156 LAMC3Q9Y6N6 1575 aa37.36■■■■□ 3.57
RFC2-210ENST00000493156 WIZO95785 1651 aa37.34■■■■□ 3.57
RFC2-210ENST00000493156 THOC2Q8NI27 1593 aaKnown RBP37.15■■■■□ 3.54
RFC2-210ENST00000493156 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
RFC2-210ENST00000493156 KIF21AQ7Z4S6 1674 aa37.07■■■■□ 3.52
RFC2-210ENST00000493156 PDS5BQ9NTI5 1447 aa37.07■■■■□ 3.52
RFC2-210ENST00000493156 CADPSQ9ULU8 1353 aa37.05■■■■□ 3.52
RFC2-210ENST00000493156 DNAJC5Q9H3Z4 198 aa36.99■■■■□ 3.51
RFC2-210ENST00000493156 TOP2AP11388 1531 aaKnown RBP36.95■■■■□ 3.5
RFC2-210ENST00000493156 MRC2Q9UBG0 1479 aa36.76■■■■□ 3.48
RFC2-210ENST00000493156 CFTRP13569 1480 aa36.74■■■■□ 3.47
RFC2-210ENST00000493156 WDR62O43379 1518 aa36.7■■■■□ 3.47
RFC2-210ENST00000493156 CEP164Q9UPV0 1460 aa36.67■■■■□ 3.46
RFC2-210ENST00000493156 FANCD2Q9BXW9 1451 aa36.64■■■■□ 3.46
RFC2-210ENST00000493156 PRDM2Q13029 1718 aa36.47■■■■□ 3.43
RFC2-210ENST00000493156 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
RFC2-210ENST00000493156 URB2Q14146 1524 aaKnown RBP36.34■■■■□ 3.41
RFC2-210ENST00000493156 TOPBP1Q92547 1522 aa36■■■■□ 3.35
RFC2-210ENST00000493156 ABCC8Q09428 1581 aa35.96■■■■□ 3.35
RFC2-210ENST00000493156 IFT140Q96RY7 1462 aa35.93■■■■□ 3.34
RFC2-210ENST00000493156 DNMBPQ6XZF7 1577 aa35.93■■■■□ 3.34
RFC2-210ENST00000493156 ZNF608Q9ULD9 1512 aaPredicted RBP35.81■■■■□ 3.32
RFC2-210ENST00000493156 TARBP1Q13395 1621 aaKnown RBP35.7■■■■□ 3.31
RFC2-210ENST00000493156 EIF4G3O43432 1585 aaKnown RBP35.69■■■■□ 3.3
RFC2-210ENST00000493156 OSCARQ8IYS5 282 aa35.68■■■■□ 3.3
RFC2-210ENST00000493156 POLA1P09884 1462 aaPredicted RBP35.65■■■■□ 3.3
RFC2-210ENST00000493156 SUPT5HO00267 1087 aaKnown RBP35.51■■■■□ 3.28
RFC2-210ENST00000493156 CUX1P39880 1505 aa35.5■■■■□ 3.27
RFC2-210ENST00000493156 AQRO60306 1485 aaKnown RBP eCLIP35.49■■■■□ 3.271e-6■■■□□ 18.9
RFC2-210ENST00000493156 FGD5Q6ZNL6 1462 aa35.47■■■■□ 3.27
RFC2-210ENST00000493156 RAD54L2Q9Y4B4 1467 aa35.47■■■■□ 3.27
RFC2-210ENST00000493156 SOGA1O94964 1423 aa35.44■■■■□ 3.26
RFC2-210ENST00000493156 WDR97A6NE52 1622 aa35.41■■■■□ 3.26
RFC2-210ENST00000493156 TRIM41Q8WV44 630 aa35.4■■■■□ 3.26
RFC2-210ENST00000493156 CHD1O14646 1710 aa35.35■■■■□ 3.25
RFC2-210ENST00000493156 TDRD9Q8NDG6 1382 aaKnown RBP35.3■■■■□ 3.24
RFC2-210ENST00000493156 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
RFC2-210ENST00000493156 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
RFC2-210ENST00000493156 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
RFC2-210ENST00000493156 ARHGEF11O15085 1522 aa35.21■■■■□ 3.23
RFC2-210ENST00000493156 SNAPC4Q5SXM2 1469 aa35.19■■■■□ 3.22
RFC2-210ENST00000493156 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
RFC2-210ENST00000493156 MAGI1Q96QZ7 1491 aaPredicted RBP35.15■■■■□ 3.22
RFC2-210ENST00000493156 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
RFC2-210ENST00000493156 FBLN2P98095 1184 aa35.08■■■■□ 3.21
RFC2-210ENST00000493156 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
RFC2-210ENST00000493156 ABCA5Q8WWZ7 1642 aa35.06■■■■□ 3.2
RFC2-210ENST00000493156 BIVM-ERCC5R4GMW8 1640 aa35.06■■■■□ 3.2
RFC2-210ENST00000493156 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
RFC2-210ENST00000493156 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
RFC2-210ENST00000493156 SYNJ2O15056 1496 aa35■■■■□ 3.19
RFC2-210ENST00000493156 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
RFC2-210ENST00000493156 CLASP1Q7Z460 1538 aa34.99■■■■□ 3.19
RFC2-210ENST00000493156 SYNJ1O43426 1573 aa34.99■■■■□ 3.19
RFC2-210ENST00000493156 CHMP7Q8WUX9 453 aaPredicted RBP34.93■■■■□ 3.18
RFC2-210ENST00000493156 ARAP1Q96P48 1450 aa34.88■■■■□ 3.17
RFC2-210ENST00000493156 CYB5RLQ6IPT4 315 aa34.78■■■■□ 3.16
RFC2-210ENST00000493156 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
RFC2-210ENST00000493156 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
RFC2-210ENST00000493156 ERICH3Q5RHP9 1530 aa34.69■■■■□ 3.14
RFC2-210ENST00000493156 FHAD1B1AJZ9 1412 aa34.63■■■■□ 3.13
RFC2-210ENST00000493156 NUP160Q12769 1436 aa34.6■■■■□ 3.13
RFC2-210ENST00000493156 CEP170Q5SW79 1584 aa34.57■■■■□ 3.13
RFC2-210ENST00000493156 SHROOM2Q13796 1616 aa34.45■■■■□ 3.11
RFC2-210ENST00000493156 ERCC6L2Q5T890 1561 aa34.4■■■■□ 3.1
RFC2-210ENST00000493156 KIF27Q86VH2 1401 aa34.3■■■■□ 3.08
RFC2-210ENST00000493156 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
RFC2-210ENST00000493156 TRHP20396 242 aaPredicted RBP34.26■■■■□ 3.08
RFC2-210ENST00000493156 CUL7Q14999 1698 aa34.25■■■■□ 3.07
RFC2-210ENST00000493156 IGF1RP08069 1367 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms