RNA–Protein interactions for RNA: ENST00000493087.5

FGD4-206, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,987 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-206ENST00000493087 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
FGD4-206ENST00000493087 MYT1Q01538 1121 aa13.44□□□□□ -0.26
FGD4-206ENST00000493087 HRCP23327 699 aa13.34□□□□□ -0.27
FGD4-206ENST00000493087 NISCHQ9Y2I1 1504 aa13.12□□□□□ -0.31
FGD4-206ENST00000493087 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
FGD4-206ENST00000493087 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
FGD4-206ENST00000493087 PCGF6Q9BYE7 350 aa12.84□□□□□ -0.35
FGD4-206ENST00000493087 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
FGD4-206ENST00000493087 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
FGD4-206ENST00000493087 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
FGD4-206ENST00000493087 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
FGD4-206ENST00000493087 MYO15BQ96JP2 1530 aa12.36□□□□□ -0.43
FGD4-206ENST00000493087 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
FGD4-206ENST00000493087 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
FGD4-206ENST00000493087 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.43
FGD4-206ENST00000493087 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
FGD4-206ENST00000493087 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
FGD4-206ENST00000493087 DCAF1Q9Y4B6 1507 aa12.29□□□□□ -0.44
FGD4-206ENST00000493087 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
FGD4-206ENST00000493087 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
FGD4-206ENST00000493087 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
FGD4-206ENST00000493087 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
FGD4-206ENST00000493087 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
FGD4-206ENST00000493087 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
FGD4-206ENST00000493087 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
FGD4-206ENST00000493087 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
FGD4-206ENST00000493087 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
FGD4-206ENST00000493087 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
FGD4-206ENST00000493087 YTHDC1Q96MU7 727 aaKnown RBP11.85□□□□□ -0.51
FGD4-206ENST00000493087 APLP2Q06481 763 aa11.84□□□□□ -0.51
FGD4-206ENST00000493087 CCER1Q8TC90 406 aaPredicted RBP11.78□□□□□ -0.52
FGD4-206ENST00000493087 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
FGD4-206ENST00000493087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.54
FGD4-206ENST00000493087 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.54
FGD4-206ENST00000493087 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
FGD4-206ENST00000493087 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
FGD4-206ENST00000493087 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
FGD4-206ENST00000493087 MIER1Q8N108 512 aa11.59□□□□□ -0.55
FGD4-206ENST00000493087 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
FGD4-206ENST00000493087 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
FGD4-206ENST00000493087 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
FGD4-206ENST00000493087 ABCC9O60706 1549 aa11.36□□□□□ -0.59
FGD4-206ENST00000493087 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
FGD4-206ENST00000493087 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
FGD4-206ENST00000493087 BCANQ96GW7 911 aa11.34□□□□□ -0.59
FGD4-206ENST00000493087 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
FGD4-206ENST00000493087 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
FGD4-206ENST00000493087 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
FGD4-206ENST00000493087 MSH5O43196 834 aa11.29□□□□□ -0.6
FGD4-206ENST00000493087 FKBP8Q14318 412 aa11.27□□□□□ -0.61
FGD4-206ENST00000493087 NEFLP07196 543 aa11.26□□□□□ -0.61
FGD4-206ENST00000493087 CCDC136Q96JN2 1154 aa11.25□□□□□ -0.61
FGD4-206ENST00000493087 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
FGD4-206ENST00000493087 EIF5BO60841 1220 aaKnown RBP11.24□□□□□ -0.61
FGD4-206ENST00000493087 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
FGD4-206ENST00000493087 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
FGD4-206ENST00000493087 ITGAEP38570 1179 aa11.15□□□□□ -0.62
FGD4-206ENST00000493087 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
FGD4-206ENST00000493087 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
FGD4-206ENST00000493087 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
FGD4-206ENST00000493087 NBR1Q14596 966 aa11.08□□□□□ -0.64
FGD4-206ENST00000493087 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
FGD4-206ENST00000493087 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
FGD4-206ENST00000493087 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
FGD4-206ENST00000493087 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
FGD4-206ENST00000493087 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
FGD4-206ENST00000493087 HNRNPUL2Q1KMD3 747 aaKnown RBP11.01□□□□□ -0.65
FGD4-206ENST00000493087 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
FGD4-206ENST00000493087 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
FGD4-206ENST00000493087 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
FGD4-206ENST00000493087 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
FGD4-206ENST00000493087 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
FGD4-206ENST00000493087 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
FGD4-206ENST00000493087 NACADO15069 1562 aa10.94□□□□□ -0.66
FGD4-206ENST00000493087 PLEKHG5O94827 1062 aa10.9□□□□□ -0.66
FGD4-206ENST00000493087 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
FGD4-206ENST00000493087 PAK3O75914 559 aaPredicted RBP10.88□□□□□ -0.67
FGD4-206ENST00000493087 CEP162Q5TB80 1403 aa10.85□□□□□ -0.67
FGD4-206ENST00000493087 ANP32AP39687 249 aaKnown RBP10.85□□□□□ -0.67
FGD4-206ENST00000493087 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
FGD4-206ENST00000493087 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
FGD4-206ENST00000493087 C11orf95C9JLR9 678 aaPredicted RBP10.83□□□□□ -0.68
FGD4-206ENST00000493087 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
FGD4-206ENST00000493087 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
FGD4-206ENST00000493087 IPO9Q96P70 1041 aaKnown RBP10.81□□□□□ -0.68
FGD4-206ENST00000493087 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
FGD4-206ENST00000493087 DDX10Q13206 875 aaKnown RBP10.79□□□□□ -0.68
FGD4-206ENST00000493087 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
FGD4-206ENST00000493087 USP35Q9P2H5 1018 aa10.79□□□□□ -0.68
FGD4-206ENST00000493087 ZMYND15Q9H091 742 aa10.78□□□□□ -0.68
FGD4-206ENST00000493087 WASHC2AQ641Q2 1341 aa10.78□□□□□ -0.68
FGD4-206ENST00000493087 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
FGD4-206ENST00000493087 ANP32CO43423 234 aa10.77□□□□□ -0.69
FGD4-206ENST00000493087 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
FGD4-206ENST00000493087 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
FGD4-206ENST00000493087 NEFMP07197 916 aa10.75□□□□□ -0.69
FGD4-206ENST00000493087 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
FGD4-206ENST00000493087 WASHC2CQ9Y4E1 1318 aa10.75□□□□□ -0.69
FGD4-206ENST00000493087 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
FGD4-206ENST00000493087 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms