RNA–Protein interactions for RNA: ENST00000493053.5

ATP5C1-210, Transcript of ATP synthase subunit gamma, mitochondrial, human

TSL 5

Gene ATP5C1, Length 1,096 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5C1-210	ENST00000493053	NISCH	Q9Y2I1	1504 aa		38.86	■■■■□ 3.81
ATP5C1-210	ENST00000493053	CCDC180	Q9P1Z9	1646 aa		34.54	■■■■□ 3.12
ATP5C1-210	ENST00000493053	ABCC9	O60706	1549 aa		33.67	■■■□□ 2.98
ATP5C1-210	ENST00000493053	RB1CC1	Q8TDY2	1594 aa		32.47	■■■□□ 2.79
ATP5C1-210	ENST00000493053	NACAD	O15069	1562 aa		32.46	■■■□□ 2.79
ATP5C1-210	ENST00000493053	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.41	■■■□□ 2.78
ATP5C1-210	ENST00000493053	DCAF8L2	P0C7V8	631 aa		32.4	■■■□□ 2.78
ATP5C1-210	ENST00000493053	MYO15B	Q96JP2	1530 aa		32.31	■■■□□ 2.76
ATP5C1-210	ENST00000493053	DCAF1	Q9Y4B6	1507 aa		32.2	■■■□□ 2.74
ATP5C1-210	ENST00000493053	UNC13A	Q9UPW8	1703 aa		31.66	■■■□□ 2.66
ATP5C1-210	ENST00000493053	SCRIB	Q14160	1630 aa		31.49	■■■□□ 2.63
ATP5C1-210	ENST00000493053	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.45	■■■□□ 2.63
ATP5C1-210	ENST00000493053	BICRA	Q9NZM4	1560 aa		31.43	■■■□□ 2.62
ATP5C1-210	ENST00000493053	SHROOM4	Q9ULL8	1493 aa		31.21	■■■□□ 2.59
ATP5C1-210	ENST00000493053	DNAJC5B	Q9UF47	199 aa		30.74	■■■□□ 2.51
ATP5C1-210	ENST00000493053	EIF4G1	Q04637	1599 aa	Known RBP	30.63	■■■□□ 2.49
ATP5C1-210	ENST00000493053	CC2D2A	Q9P2K1	1620 aa		30.47	■■■□□ 2.47
ATP5C1-210	ENST00000493053	CECR2	Q9BXF3	1484 aa		30.26	■■■□□ 2.44
ATP5C1-210	ENST00000493053	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.15	■■■□□ 2.42
ATP5C1-210	ENST00000493053	SMARCA4	P51532	1647 aa		30.14	■■■□□ 2.41
ATP5C1-210	ENST00000493053	SMARCA2	P51531	1590 aa		29.95	■■■□□ 2.39
ATP5C1-210	ENST00000493053	ATAD2B	Q9ULI0	1458 aa		29.95	■■■□□ 2.39
ATP5C1-210	ENST00000493053	NCAPD3	P42695	1498 aa		29.93	■■■□□ 2.38
ATP5C1-210	ENST00000493053	MROH2B	Q7Z745	1585 aa		29.93	■■■□□ 2.38
ATP5C1-210	ENST00000493053	PEG3	Q9GZU2	1588 aa		29.86	■■■□□ 2.37
ATP5C1-210	ENST00000493053	HMGXB3	Q12766	1538 aa		29.81	■■■□□ 2.36
ATP5C1-210	ENST00000493053	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.74	■■■□□ 2.35
ATP5C1-210	ENST00000493053	RSF1	Q96T23	1441 aa	Predicted RBP	29.62	■■■□□ 2.33
ATP5C1-210	ENST00000493053	WIZ	O95785	1651 aa		29.6	■■■□□ 2.33
ATP5C1-210	ENST00000493053	TOP2A	P11388	1531 aa	Known RBP	29.35	■■■□□ 2.29
ATP5C1-210	ENST00000493053	LAMC3	Q9Y6N6	1575 aa		29.15	■■■□□ 2.26
ATP5C1-210	ENST00000493053	NES	P48681	1621 aa		29.14	■■■□□ 2.26
ATP5C1-210	ENST00000493053	ERCC6	Q03468	1493 aa		29.06	■■■□□ 2.24
ATP5C1-210	ENST00000493053	CADPS	Q9ULU8	1353 aa		29.06	■■■□□ 2.24
ATP5C1-210	ENST00000493053	CCDC88B	A6NC98	1476 aa		28.96	■■■□□ 2.23
ATP5C1-210	ENST00000493053	PDS5B	Q9NTI5	1447 aa		28.95	■■■□□ 2.23
ATP5C1-210	ENST00000493053	SUPT5H	O00267	1087 aa	Known RBP	28.92	■■■□□ 2.22
ATP5C1-210	ENST00000493053	CFTR	P13569	1480 aa		28.91	■■■□□ 2.22
ATP5C1-210	ENST00000493053	KIF21A	Q7Z4S6	1674 aa		28.8	■■■□□ 2.2
ATP5C1-210	ENST00000493053	CUX2	O14529	1486 aa		28.73	■■■□□ 2.19
ATP5C1-210	ENST00000493053	FANCD2	Q9BXW9	1451 aa		28.73	■■■□□ 2.19
ATP5C1-210	ENST00000493053	THOC2	Q8NI27	1593 aa	Known RBP	28.71	■■■□□ 2.19
ATP5C1-210	ENST00000493053	CEP164	Q9UPV0	1460 aa		28.71	■■■□□ 2.19
ATP5C1-210	ENST00000493053	PRDM2	Q13029	1718 aa		28.7	■■■□□ 2.19
ATP5C1-210	ENST00000493053	MRC2	Q9UBG0	1479 aa		28.65	■■■□□ 2.18
ATP5C1-210	ENST00000493053	WDR62	O43379	1518 aa		28.54	■■■□□ 2.16
ATP5C1-210	ENST00000493053	URB2	Q14146	1524 aa	Known RBP	28.41	■■■□□ 2.14
ATP5C1-210	ENST00000493053	ABCC8	Q09428	1581 aa		28.33	■■■□□ 2.12
ATP5C1-210	ENST00000493053	TOPBP1	Q92547	1522 aa		28.28	■■■□□ 2.12
ATP5C1-210	ENST00000493053	DNMBP	Q6XZF7	1577 aa		28.27	■■■□□ 2.12
ATP5C1-210	ENST00000493053	IFT140	Q96RY7	1462 aa		28.1	■■■□□ 2.09
ATP5C1-210	ENST00000493053	CUX1	P39880	1505 aa		28.08	■■■□□ 2.08
ATP5C1-210	ENST00000493053	POLA1	P09884	1462 aa	Predicted RBP	28.04	■■■□□ 2.08
ATP5C1-210	ENST00000493053	FGD5	Q6ZNL6	1462 aa		27.99	■■■□□ 2.07
ATP5C1-210	ENST00000493053	WRN	Q14191	1432 aa	Predicted RBP eCLIP	27.97	■■■□□ 2.07
ATP5C1-210	ENST00000493053	TARBP1	Q13395	1621 aa	Known RBP	27.94	■■■□□ 2.06
ATP5C1-210	ENST00000493053	SOGA1	O94964	1423 aa		27.92	■■■□□ 2.06
ATP5C1-210	ENST00000493053	ZNF608	Q9ULD9	1512 aa	Predicted RBP	27.91	■■■□□ 2.06
ATP5C1-210	ENST00000493053	RAD54L2	Q9Y4B4	1467 aa		27.89	■■■□□ 2.06
ATP5C1-210	ENST00000493053	TOP2B	Q02880	1626 aa		27.89	■■■□□ 2.05
ATP5C1-210	ENST00000493053	BIVM-ERCC5	R4GMW8	1640 aa		27.88	■■■□□ 2.05
ATP5C1-210	ENST00000493053	SYNJ1	O43426	1573 aa		27.86	■■■□□ 2.05
ATP5C1-210	ENST00000493053	EIF4G3	O43432	1585 aa	Known RBP	27.84	■■■□□ 2.05
ATP5C1-210	ENST00000493053	WDR97	A6NE52	1622 aa		27.81	■■■□□ 2.04
ATP5C1-210	ENST00000493053	AQR	O60306	1485 aa	Known RBP eCLIP	27.76	■■■□□ 2.04	3e-7	■■■■■ 28
ATP5C1-210	ENST00000493053	TDRD9	Q8NDG6	1382 aa	Known RBP	27.73	■■■□□ 2.03
ATP5C1-210	ENST00000493053	ABCA10	Q8WWZ4	1543 aa		27.73	■■■□□ 2.03
ATP5C1-210	ENST00000493053	DNAJC5	Q9H3Z4	198 aa		27.68	■■■□□ 2.02
ATP5C1-210	ENST00000493053	GAPVD1	Q14C86	1478 aa		27.62	■■■□□ 2.01
ATP5C1-210	ENST00000493053	GRIN2B	Q13224	1484 aa		27.61	■■■□□ 2.01
ATP5C1-210	ENST00000493053	ABCA5	Q8WWZ7	1642 aa		27.6	■■■□□ 2.01
ATP5C1-210	ENST00000493053	SNAPC4	Q5SXM2	1469 aa		27.55	■■■□□ 2
ATP5C1-210	ENST00000493053	PBRM1	Q86U86	1689 aa		27.54	■■■□□ 2
ATP5C1-210	ENST00000493053	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.54	■■■□□ 2
ATP5C1-210	ENST00000493053	OSCAR	Q8IYS5	282 aa		27.52	■■■□□ 2
ATP5C1-210	ENST00000493053	CHD1	O14646	1710 aa		27.44	■■□□□ 1.98
ATP5C1-210	ENST00000493053	FBLN2	P98095	1184 aa		27.43	■■□□□ 1.98
ATP5C1-210	ENST00000493053	SYNJ2	O15056	1496 aa		27.43	■■□□□ 1.98
ATP5C1-210	ENST00000493053	ERICH3	Q5RHP9	1530 aa		27.42	■■□□□ 1.98
ATP5C1-210	ENST00000493053	CHMP7	Q8WUX9	453 aa	Predicted RBP	27.39	■■□□□ 1.98
ATP5C1-210	ENST00000493053	KIF27	Q86VH2	1401 aa		27.39	■■□□□ 1.97
ATP5C1-210	ENST00000493053	TRIM41	Q8WV44	630 aa		27.35	■■□□□ 1.97
ATP5C1-210	ENST00000493053	ADAMTS12	P58397	1594 aa		27.35	■■□□□ 1.97
ATP5C1-210	ENST00000493053	FHAD1	B1AJZ9	1412 aa		27.32	■■□□□ 1.96
ATP5C1-210	ENST00000493053	GRIN2A	Q12879	1464 aa		27.25	■■□□□ 1.95
ATP5C1-210	ENST00000493053	IGF1R	P08069	1367 aa		27.22	■■□□□ 1.95
ATP5C1-210	ENST00000493053	CUL7	Q14999	1698 aa		27.2	■■□□□ 1.94
ATP5C1-210	ENST00000493053	CLASP1	Q7Z460	1538 aa		27.18	■■□□□ 1.94
ATP5C1-210	ENST00000493053	NUP160	Q12769	1436 aa		27.13	■■□□□ 1.93
ATP5C1-210	ENST00000493053	CEP170	Q5SW79	1584 aa		27.09	■■□□□ 1.93
ATP5C1-210	ENST00000493053	CARMIL1	Q5VZK9	1371 aa		27.09	■■□□□ 1.93
ATP5C1-210	ENST00000493053	ARHGEF11	O15085	1522 aa		27.08	■■□□□ 1.93
ATP5C1-210	ENST00000493053	RUSC2	Q8N2Y8	1516 aa		27.08	■■□□□ 1.93
ATP5C1-210	ENST00000493053	RIMBP3C	A6NJZ7	1639 aa		27.05	■■□□□ 1.92
ATP5C1-210	ENST00000493053	RIMBP3B	A6NNM3	1639 aa		27.05	■■□□□ 1.92
ATP5C1-210	ENST00000493053	RIMBP3	Q9UFD9	1639 aa		27.05	■■□□□ 1.92
ATP5C1-210	ENST00000493053	CHIC1	Q5VXU3	224 aa		27.04	■■□□□ 1.92
ATP5C1-210	ENST00000493053	RAPGEF2	Q9Y4G8	1499 aa		26.95	■■□□□ 1.91
ATP5C1-210	ENST00000493053	EEA1	Q15075	1411 aa		26.95	■■□□□ 1.9
ATP5C1-210	ENST00000493053	SHROOM2	Q13796	1616 aa		26.9	■■□□□ 1.9

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