RNA–Protein interactions for RNA: ENST00000493016.1

TSC22D1-208, Transcript of TSC22 domain family member 1, humanhuman

TSL 4

Gene TSC22D1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-208ENST00000493016 NISCHQ9Y2I1 1504 aa40.66■■■■■ 4.1
TSC22D1-208ENST00000493016 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.42
TSC22D1-208ENST00000493016 ABCC9O60706 1549 aa36.17■■■■□ 3.38
TSC22D1-208ENST00000493016 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.12
TSC22D1-208ENST00000493016 NACADO15069 1562 aa34.38■■■■□ 3.09
TSC22D1-208ENST00000493016 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
TSC22D1-208ENST00000493016 MYO15BQ96JP2 1530 aa33.98■■■■□ 3.03
TSC22D1-208ENST00000493016 UNC13AQ9UPW8 1703 aa33.85■■■■□ 3.01
TSC22D1-208ENST00000493016 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
TSC22D1-208ENST00000493016 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
TSC22D1-208ENST00000493016 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
TSC22D1-208ENST00000493016 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
TSC22D1-208ENST00000493016 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
TSC22D1-208ENST00000493016 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
TSC22D1-208ENST00000493016 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
TSC22D1-208ENST00000493016 CC2D2AQ9P2K1 1620 aa32.73■■■□□ 2.83
TSC22D1-208ENST00000493016 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.82
TSC22D1-208ENST00000493016 CECR2Q9BXF3 1484 aa32.57■■■□□ 2.8
TSC22D1-208ENST00000493016 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
TSC22D1-208ENST00000493016 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
TSC22D1-208ENST00000493016 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
TSC22D1-208ENST00000493016 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
TSC22D1-208ENST00000493016 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
TSC22D1-208ENST00000493016 HMGXB3Q12766 1538 aa31.52■■■□□ 2.64
TSC22D1-208ENST00000493016 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.61
TSC22D1-208ENST00000493016 BAZ1BQ9UIG0 1483 aaKnown RBP31.35■■■□□ 2.61
TSC22D1-208ENST00000493016 MROH2BQ7Z745 1585 aa31.33■■■□□ 2.61
TSC22D1-208ENST00000493016 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
TSC22D1-208ENST00000493016 NESP48681 1621 aa31.14■■■□□ 2.58
TSC22D1-208ENST00000493016 CUX2O14529 1486 aa31.11■■■□□ 2.57
TSC22D1-208ENST00000493016 LAMC3Q9Y6N6 1575 aa30.99■■■□□ 2.55
TSC22D1-208ENST00000493016 WIZO95785 1651 aa30.99■■■□□ 2.55
TSC22D1-208ENST00000493016 DNAJC5Q9H3Z4 198 aa30.83■■■□□ 2.53
TSC22D1-208ENST00000493016 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
TSC22D1-208ENST00000493016 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
TSC22D1-208ENST00000493016 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
TSC22D1-208ENST00000493016 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
TSC22D1-208ENST00000493016 RSF1Q96T23 1441 aaPredicted RBP30.74■■■□□ 2.51
TSC22D1-208ENST00000493016 TOP2AP11388 1531 aaKnown RBP30.6■■■□□ 2.49
TSC22D1-208ENST00000493016 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
TSC22D1-208ENST00000493016 CFTRP13569 1480 aa30.45■■■□□ 2.47
TSC22D1-208ENST00000493016 WDR62O43379 1518 aa30.43■■■□□ 2.46
TSC22D1-208ENST00000493016 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
TSC22D1-208ENST00000493016 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
TSC22D1-208ENST00000493016 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
TSC22D1-208ENST00000493016 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
TSC22D1-208ENST00000493016 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
TSC22D1-208ENST00000493016 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
TSC22D1-208ENST00000493016 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
TSC22D1-208ENST00000493016 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
TSC22D1-208ENST00000493016 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
TSC22D1-208ENST00000493016 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
TSC22D1-208ENST00000493016 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
TSC22D1-208ENST00000493016 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
TSC22D1-208ENST00000493016 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
TSC22D1-208ENST00000493016 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
TSC22D1-208ENST00000493016 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
TSC22D1-208ENST00000493016 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
TSC22D1-208ENST00000493016 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.31
TSC22D1-208ENST00000493016 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
TSC22D1-208ENST00000493016 SOGA1O94964 1423 aa29.43■■■□□ 2.3
TSC22D1-208ENST00000493016 CUX1P39880 1505 aa29.42■■■□□ 2.3
TSC22D1-208ENST00000493016 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
TSC22D1-208ENST00000493016 CHD1O14646 1710 aa29.39■■■□□ 2.3
TSC22D1-208ENST00000493016 TDRD9Q8NDG6 1382 aaKnown RBP29.33■■■□□ 2.29
TSC22D1-208ENST00000493016 WDR97A6NE52 1622 aa29.33■■■□□ 2.29
TSC22D1-208ENST00000493016 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
TSC22D1-208ENST00000493016 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
TSC22D1-208ENST00000493016 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
TSC22D1-208ENST00000493016 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
TSC22D1-208ENST00000493016 FBLN2P98095 1184 aa29.24■■■□□ 2.27
TSC22D1-208ENST00000493016 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
TSC22D1-208ENST00000493016 GRIN2BQ13224 1484 aa29.16■■■□□ 2.26
TSC22D1-208ENST00000493016 MAGI1Q96QZ7 1491 aaPredicted RBP29.15■■■□□ 2.26
TSC22D1-208ENST00000493016 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
TSC22D1-208ENST00000493016 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
TSC22D1-208ENST00000493016 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
TSC22D1-208ENST00000493016 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
TSC22D1-208ENST00000493016 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
TSC22D1-208ENST00000493016 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
TSC22D1-208ENST00000493016 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
TSC22D1-208ENST00000493016 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
TSC22D1-208ENST00000493016 SYNJ1O43426 1573 aa29.02■■■□□ 2.24
TSC22D1-208ENST00000493016 CLASP1Q7Z460 1538 aa29.01■■■□□ 2.23
TSC22D1-208ENST00000493016 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.23
TSC22D1-208ENST00000493016 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
TSC22D1-208ENST00000493016 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
TSC22D1-208ENST00000493016 ADAMTS12P58397 1594 aa28.81■■■□□ 2.2
TSC22D1-208ENST00000493016 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
TSC22D1-208ENST00000493016 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
TSC22D1-208ENST00000493016 FHAD1B1AJZ9 1412 aa28.72■■■□□ 2.19
TSC22D1-208ENST00000493016 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
TSC22D1-208ENST00000493016 NUP160Q12769 1436 aa28.68■■■□□ 2.18
TSC22D1-208ENST00000493016 TRHP20396 242 aaPredicted RBP28.59■■■□□ 2.17
TSC22D1-208ENST00000493016 SHROOM2Q13796 1616 aa28.56■■■□□ 2.16
TSC22D1-208ENST00000493016 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
TSC22D1-208ENST00000493016 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
TSC22D1-208ENST00000493016 IGF1RP08069 1367 aa28.4■■■□□ 2.14
TSC22D1-208ENST00000493016 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
TSC22D1-208ENST00000493016 CUL7Q14999 1698 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms