RNA–Protein interactions for RNA: ENST00000493007.1

PITPNB-210, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 3

Gene PITPNB, Length 564 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-210ENST00000493007 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
PITPNB-210ENST00000493007 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
PITPNB-210ENST00000493007 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
PITPNB-210ENST00000493007 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
PITPNB-210ENST00000493007 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
PITPNB-210ENST00000493007 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
PITPNB-210ENST00000493007 ABCC9O60706 1549 aa18.97■□□□□ 0.63
PITPNB-210ENST00000493007 FOXD1Q16676 465 aa18.8■□□□□ 0.6
PITPNB-210ENST00000493007 DCAF8L2P0C7V8 631 aa18.35■□□□□ 0.53
PITPNB-210ENST00000493007 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
PITPNB-210ENST00000493007 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
PITPNB-210ENST00000493007 NACADO15069 1562 aa18.21■□□□□ 0.51
PITPNB-210ENST00000493007 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
PITPNB-210ENST00000493007 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
PITPNB-210ENST00000493007 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
PITPNB-210ENST00000493007 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
PITPNB-210ENST00000493007 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
PITPNB-210ENST00000493007 PPP6R1Q9UPN7 881 aa17.71■□□□□ 0.43
PITPNB-210ENST00000493007 UNC13AQ9UPW8 1703 aa17.71■□□□□ 0.43
PITPNB-210ENST00000493007 ADRA2BP18089 450 aa17.69■□□□□ 0.42
PITPNB-210ENST00000493007 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
PITPNB-210ENST00000493007 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
PITPNB-210ENST00000493007 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
PITPNB-210ENST00000493007 MSH5O43196 834 aa17.57■□□□□ 0.4
PITPNB-210ENST00000493007 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
PITPNB-210ENST00000493007 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
PITPNB-210ENST00000493007 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
PITPNB-210ENST00000493007 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
PITPNB-210ENST00000493007 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
PITPNB-210ENST00000493007 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
PITPNB-210ENST00000493007 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
PITPNB-210ENST00000493007 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
PITPNB-210ENST00000493007 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
PITPNB-210ENST00000493007 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
PITPNB-210ENST00000493007 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
PITPNB-210ENST00000493007 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
PITPNB-210ENST00000493007 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
PITPNB-210ENST00000493007 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
PITPNB-210ENST00000493007 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
PITPNB-210ENST00000493007 WIZO95785 1651 aa16.62■□□□□ 0.25
PITPNB-210ENST00000493007 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
PITPNB-210ENST00000493007 NESP48681 1621 aa16.42■□□□□ 0.22
PITPNB-210ENST00000493007 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
PITPNB-210ENST00000493007 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
PITPNB-210ENST00000493007 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
PITPNB-210ENST00000493007 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
PITPNB-210ENST00000493007 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
PITPNB-210ENST00000493007 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
PITPNB-210ENST00000493007 CFTRP13569 1480 aa16.27■□□□□ 0.19
PITPNB-210ENST00000493007 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
PITPNB-210ENST00000493007 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
PITPNB-210ENST00000493007 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
PITPNB-210ENST00000493007 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
PITPNB-210ENST00000493007 CUX2O14529 1486 aa16.14■□□□□ 0.17
PITPNB-210ENST00000493007 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
PITPNB-210ENST00000493007 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
PITPNB-210ENST00000493007 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
PITPNB-210ENST00000493007 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
PITPNB-210ENST00000493007 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
PITPNB-210ENST00000493007 WDR62O43379 1518 aa16.01■□□□□ 0.15
PITPNB-210ENST00000493007 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
PITPNB-210ENST00000493007 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
PITPNB-210ENST00000493007 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
PITPNB-210ENST00000493007 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
PITPNB-210ENST00000493007 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
PITPNB-210ENST00000493007 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
PITPNB-210ENST00000493007 CUX1P39880 1505 aa15.78■□□□□ 0.12
PITPNB-210ENST00000493007 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
PITPNB-210ENST00000493007 SOGA1O94964 1423 aa15.75■□□□□ 0.11
PITPNB-210ENST00000493007 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
PITPNB-210ENST00000493007 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
PITPNB-210ENST00000493007 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
PITPNB-210ENST00000493007 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
PITPNB-210ENST00000493007 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
PITPNB-210ENST00000493007 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
PITPNB-210ENST00000493007 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.1
PITPNB-210ENST00000493007 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
PITPNB-210ENST00000493007 DNAJC5Q9H3Z4 198 aa15.66■□□□□ 0.1
PITPNB-210ENST00000493007 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
PITPNB-210ENST00000493007 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
PITPNB-210ENST00000493007 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
PITPNB-210ENST00000493007 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
PITPNB-210ENST00000493007 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
PITPNB-210ENST00000493007 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
PITPNB-210ENST00000493007 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
PITPNB-210ENST00000493007 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
PITPNB-210ENST00000493007 HOXD11P31277 338 aaPredicted RBP15.54■□□□□ 0.08
PITPNB-210ENST00000493007 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
PITPNB-210ENST00000493007 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
PITPNB-210ENST00000493007 FBLN2P98095 1184 aa15.52■□□□□ 0.08
PITPNB-210ENST00000493007 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
PITPNB-210ENST00000493007 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
PITPNB-210ENST00000493007 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
PITPNB-210ENST00000493007 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
PITPNB-210ENST00000493007 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
PITPNB-210ENST00000493007 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
PITPNB-210ENST00000493007 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
PITPNB-210ENST00000493007 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
PITPNB-210ENST00000493007 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
PITPNB-210ENST00000493007 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms