RNA–Protein interactions for RNA: ENST00000492933.5

PSMD6-210, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best) BASIC

Gene PSMD6, Length 1,495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-210ENST00000492933 NISCHQ9Y2I1 1504 aa40.19■■■■■ 4.02
PSMD6-210ENST00000492933 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
PSMD6-210ENST00000492933 ABCC9O60706 1549 aa33.89■■■■□ 3.02
PSMD6-210ENST00000492933 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
PSMD6-210ENST00000492933 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
PSMD6-210ENST00000492933 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
PSMD6-210ENST00000492933 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
PSMD6-210ENST00000492933 NACADO15069 1562 aa33.08■■■□□ 2.89
PSMD6-210ENST00000492933 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
PSMD6-210ENST00000492933 SCRIBQ14160 1630 aa32.42■■■□□ 2.78
PSMD6-210ENST00000492933 UNC13AQ9UPW8 1703 aa32.32■■■□□ 2.76
PSMD6-210ENST00000492933 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
PSMD6-210ENST00000492933 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
PSMD6-210ENST00000492933 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
PSMD6-210ENST00000492933 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
PSMD6-210ENST00000492933 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
PSMD6-210ENST00000492933 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
PSMD6-210ENST00000492933 EIF4G1Q04637 1599 aaKnown RBP31.03■■■□□ 2.56
PSMD6-210ENST00000492933 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
PSMD6-210ENST00000492933 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
PSMD6-210ENST00000492933 WIZO95785 1651 aa30.75■■■□□ 2.51
PSMD6-210ENST00000492933 PEG3Q9GZU2 1588 aa30.73■■■□□ 2.51
PSMD6-210ENST00000492933 CC2D2AQ9P2K1 1620 aa30.72■■■□□ 2.51
PSMD6-210ENST00000492933 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
PSMD6-210ENST00000492933 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
PSMD6-210ENST00000492933 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
PSMD6-210ENST00000492933 NCAPD3P42695 1498 aa30.49■■■□□ 2.47
PSMD6-210ENST00000492933 HMGXB3Q12766 1538 aa30.45■■■□□ 2.47
PSMD6-210ENST00000492933 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
PSMD6-210ENST00000492933 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
PSMD6-210ENST00000492933 DNAJC5BQ9UF47 199 aa30.38■■■□□ 2.45
PSMD6-210ENST00000492933 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
PSMD6-210ENST00000492933 CFTRP13569 1480 aa29.65■■■□□ 2.34
PSMD6-210ENST00000492933 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
PSMD6-210ENST00000492933 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
PSMD6-210ENST00000492933 LAMC3Q9Y6N6 1575 aa29.59■■■□□ 2.33
PSMD6-210ENST00000492933 NESP48681 1621 aa29.58■■■□□ 2.33
PSMD6-210ENST00000492933 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
PSMD6-210ENST00000492933 PDS5BQ9NTI5 1447 aa29.32■■■□□ 2.28
PSMD6-210ENST00000492933 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
PSMD6-210ENST00000492933 ABCC8Q09428 1581 aa29.24■■■□□ 2.27
PSMD6-210ENST00000492933 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
PSMD6-210ENST00000492933 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
PSMD6-210ENST00000492933 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
PSMD6-210ENST00000492933 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
PSMD6-210ENST00000492933 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
PSMD6-210ENST00000492933 CUX1P39880 1505 aa29.06■■■□□ 2.24
PSMD6-210ENST00000492933 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
PSMD6-210ENST00000492933 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
PSMD6-210ENST00000492933 MRC2Q9UBG0 1479 aa29.01■■■□□ 2.24
PSMD6-210ENST00000492933 TOP2BQ02880 1626 aa29.01■■■□□ 2.23
PSMD6-210ENST00000492933 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
PSMD6-210ENST00000492933 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
PSMD6-210ENST00000492933 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
PSMD6-210ENST00000492933 WDR62O43379 1518 aa28.92■■■□□ 2.22
PSMD6-210ENST00000492933 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
PSMD6-210ENST00000492933 FGD5Q6ZNL6 1462 aa28.81■■■□□ 2.2
PSMD6-210ENST00000492933 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
PSMD6-210ENST00000492933 CUX2O14529 1486 aa28.66■■■□□ 2.18
PSMD6-210ENST00000492933 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.18
PSMD6-210ENST00000492933 SOGA1O94964 1423 aa28.62■■■□□ 2.17
PSMD6-210ENST00000492933 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
PSMD6-210ENST00000492933 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
PSMD6-210ENST00000492933 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
PSMD6-210ENST00000492933 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
PSMD6-210ENST00000492933 RUSC2Q8N2Y8 1516 aa28.47■■■□□ 2.15
PSMD6-210ENST00000492933 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
PSMD6-210ENST00000492933 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
PSMD6-210ENST00000492933 ZNF608Q9ULD9 1512 aaPredicted RBP28.4■■■□□ 2.14
PSMD6-210ENST00000492933 EEA1Q15075 1411 aa28.39■■■□□ 2.14
PSMD6-210ENST00000492933 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
PSMD6-210ENST00000492933 EIF4G3O43432 1585 aaKnown RBP28.36■■■□□ 2.13
PSMD6-210ENST00000492933 FAM9AQ8IZU1 332 aaPredicted RBP28.33■■■□□ 2.13
PSMD6-210ENST00000492933 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
PSMD6-210ENST00000492933 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.126e-6■■■■□ 23.2
PSMD6-210ENST00000492933 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
PSMD6-210ENST00000492933 ERICH3Q5RHP9 1530 aa28.24■■■□□ 2.11
PSMD6-210ENST00000492933 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
PSMD6-210ENST00000492933 IGF1RP08069 1367 aa28.21■■■□□ 2.11
PSMD6-210ENST00000492933 CSRNP3Q8WYN3 585 aa28.21■■■□□ 2.11
PSMD6-210ENST00000492933 CUL7Q14999 1698 aa28.16■■■□□ 2.1
PSMD6-210ENST00000492933 KIF21BO75037 1637 aa28.11■■■□□ 2.09
PSMD6-210ENST00000492933 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
PSMD6-210ENST00000492933 SNAPC4Q5SXM2 1469 aa28.1■■■□□ 2.09
PSMD6-210ENST00000492933 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
PSMD6-210ENST00000492933 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
PSMD6-210ENST00000492933 CARMIL1Q5VZK9 1371 aa28.05■■■□□ 2.08
PSMD6-210ENST00000492933 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.07
PSMD6-210ENST00000492933 RAPGEF2Q9Y4G8 1499 aa28■■■□□ 2.07
PSMD6-210ENST00000492933 GOLGA3Q08378 1498 aa27.97■■■□□ 2.07
PSMD6-210ENST00000492933 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
PSMD6-210ENST00000492933 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
PSMD6-210ENST00000492933 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
PSMD6-210ENST00000492933 CHD1O14646 1710 aa27.88■■■□□ 2.05
PSMD6-210ENST00000492933 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
PSMD6-210ENST00000492933 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
PSMD6-210ENST00000492933 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
PSMD6-210ENST00000492933 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.04
PSMD6-210ENST00000492933 FBLN2P98095 1184 aa27.76■■■□□ 2.04
PSMD6-210ENST00000492933 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms