RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
EPHB4-209ENST00000492878 ABCC9O60706 1549 aa36.03■■■■□ 3.36
EPHB4-209ENST00000492878 CCDC180Q9P1Z9 1646 aa35.55■■■■□ 3.28
EPHB4-209ENST00000492878 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
EPHB4-209ENST00000492878 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
EPHB4-209ENST00000492878 NACADO15069 1562 aa33.74■■■□□ 2.99
EPHB4-209ENST00000492878 PABPN1Q86U42 306 aaKnown RBP eCLIP33.41■■■□□ 2.94
EPHB4-209ENST00000492878 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
EPHB4-209ENST00000492878 BICRAQ9NZM4 1560 aa33.18■■■□□ 2.9
EPHB4-209ENST00000492878 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
EPHB4-209ENST00000492878 MYO15BQ96JP2 1530 aa33.16■■■□□ 2.9
EPHB4-209ENST00000492878 SHROOM4Q9ULL8 1493 aa32.71■■■□□ 2.83
EPHB4-209ENST00000492878 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
EPHB4-209ENST00000492878 CECR2Q9BXF3 1484 aa32.56■■■□□ 2.8
EPHB4-209ENST00000492878 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
EPHB4-209ENST00000492878 ZCCHC6Q5VYS8 1495 aaKnown RBP32.45■■■□□ 2.79
EPHB4-209ENST00000492878 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
EPHB4-209ENST00000492878 SCRIBQ14160 1630 aa32.25■■■□□ 2.75
EPHB4-209ENST00000492878 DNAJC5Q9H3Z4 198 aa32.04■■■□□ 2.72
EPHB4-209ENST00000492878 CUX2O14529 1486 aa31.39■■■□□ 2.62
EPHB4-209ENST00000492878 NCAPD3P42695 1498 aa31.18■■■□□ 2.58
EPHB4-209ENST00000492878 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
EPHB4-209ENST00000492878 ATAD2BQ9ULI0 1458 aa30.96■■■□□ 2.55
EPHB4-209ENST00000492878 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
EPHB4-209ENST00000492878 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
EPHB4-209ENST00000492878 NESP48681 1621 aa30.8■■■□□ 2.52
EPHB4-209ENST00000492878 SMARCA4P51532 1647 aa30.76■■■□□ 2.52
EPHB4-209ENST00000492878 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
EPHB4-209ENST00000492878 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.48
EPHB4-209ENST00000492878 PEG3Q9GZU2 1588 aa30.55■■■□□ 2.48
EPHB4-209ENST00000492878 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
EPHB4-209ENST00000492878 BAZ1AQ9NRL2 1556 aaPredicted RBP30.52■■■□□ 2.48
EPHB4-209ENST00000492878 KIF21AQ7Z4S6 1674 aa30.39■■■□□ 2.46
EPHB4-209ENST00000492878 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
EPHB4-209ENST00000492878 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
EPHB4-209ENST00000492878 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
EPHB4-209ENST00000492878 CADPSQ9ULU8 1353 aa30.15■■■□□ 2.42
EPHB4-209ENST00000492878 MRC2Q9UBG0 1479 aa30.13■■■□□ 2.41
EPHB4-209ENST00000492878 WDR62O43379 1518 aa30.12■■■□□ 2.41
EPHB4-209ENST00000492878 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
EPHB4-209ENST00000492878 WIZO95785 1651 aa29.82■■■□□ 2.36
EPHB4-209ENST00000492878 FANCD2Q9BXW9 1451 aa29.79■■■□□ 2.36
EPHB4-209ENST00000492878 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
EPHB4-209ENST00000492878 CFTRP13569 1480 aa29.71■■■□□ 2.35
EPHB4-209ENST00000492878 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
EPHB4-209ENST00000492878 RIMBP3CA6NJZ7 1639 aa29.49■■■□□ 2.31
EPHB4-209ENST00000492878 RIMBP3BA6NNM3 1639 aa29.49■■■□□ 2.31
EPHB4-209ENST00000492878 RIMBP3Q9UFD9 1639 aa29.49■■■□□ 2.31
EPHB4-209ENST00000492878 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
EPHB4-209ENST00000492878 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
EPHB4-209ENST00000492878 ARHGEF11O15085 1522 aa29.35■■■□□ 2.29
EPHB4-209ENST00000492878 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
EPHB4-209ENST00000492878 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
EPHB4-209ENST00000492878 IFT140Q96RY7 1462 aa29.32■■■□□ 2.28
EPHB4-209ENST00000492878 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
EPHB4-209ENST00000492878 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
EPHB4-209ENST00000492878 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
EPHB4-209ENST00000492878 ABCC8Q09428 1581 aa29.07■■■□□ 2.24
EPHB4-209ENST00000492878 CYB5RLQ6IPT4 315 aa29.07■■■□□ 2.24
EPHB4-209ENST00000492878 DNMBPQ6XZF7 1577 aa29.02■■■□□ 2.24
EPHB4-209ENST00000492878 CHD1O14646 1710 aa29.02■■■□□ 2.24
EPHB4-209ENST00000492878 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
EPHB4-209ENST00000492878 TARBP1Q13395 1621 aaKnown RBP29.01■■■□□ 2.23
EPHB4-209ENST00000492878 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.234e-7■■■■□ 23.5
EPHB4-209ENST00000492878 TRHP20396 242 aaPredicted RBP28.87■■■□□ 2.21
EPHB4-209ENST00000492878 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
EPHB4-209ENST00000492878 FBLN2P98095 1184 aa28.77■■■□□ 2.2
EPHB4-209ENST00000492878 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
EPHB4-209ENST00000492878 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
EPHB4-209ENST00000492878 WDR97A6NE52 1622 aa28.68■■■□□ 2.18
EPHB4-209ENST00000492878 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
EPHB4-209ENST00000492878 SOGA1O94964 1423 aa28.65■■■□□ 2.18
EPHB4-209ENST00000492878 SNAPC4Q5SXM2 1469 aa28.65■■■□□ 2.18
EPHB4-209ENST00000492878 SYNJ1O43426 1573 aa28.59■■■□□ 2.17
EPHB4-209ENST00000492878 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
EPHB4-209ENST00000492878 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
EPHB4-209ENST00000492878 CHMP7Q8WUX9 453 aaPredicted RBP28.51■■■□□ 2.15
EPHB4-209ENST00000492878 SYNJ2O15056 1496 aa28.5■■■□□ 2.15
EPHB4-209ENST00000492878 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
EPHB4-209ENST00000492878 AEBP2Q6ZN18 517 aaPredicted RBP28.47■■■□□ 2.15
EPHB4-209ENST00000492878 CUX1P39880 1505 aa28.45■■■□□ 2.15
EPHB4-209ENST00000492878 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
EPHB4-209ENST00000492878 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
EPHB4-209ENST00000492878 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
EPHB4-209ENST00000492878 ABCA10Q8WWZ4 1543 aa28.24■■■□□ 2.11
EPHB4-209ENST00000492878 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.11
EPHB4-209ENST00000492878 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
EPHB4-209ENST00000492878 NUP160Q12769 1436 aa28.12■■■□□ 2.09
EPHB4-209ENST00000492878 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
EPHB4-209ENST00000492878 SHROOM2Q13796 1616 aa28.08■■■□□ 2.09
EPHB4-209ENST00000492878 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
EPHB4-209ENST00000492878 KIF13AQ9H1H9 1805 aa28■■■□□ 2.07
EPHB4-209ENST00000492878 WRNQ14191 1432 aaPredicted RBP eCLIP27.95■■■□□ 2.07
EPHB4-209ENST00000492878 FHAD1B1AJZ9 1412 aa27.94■■■□□ 2.06
EPHB4-209ENST00000492878 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
EPHB4-209ENST00000492878 ERICH3Q5RHP9 1530 aa27.86■■■□□ 2.05
EPHB4-209ENST00000492878 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
EPHB4-209ENST00000492878 PRG4Q92954 1404 aaPredicted RBP27.82■■■□□ 2.04
EPHB4-209ENST00000492878 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
EPHB4-209ENST00000492878 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms