RNA–Protein interactions for RNA: ENST00000492597.5

MCCC1-210, Transcript of methylcrotonoyl-CoA carboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene MCCC1, Length 2,774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC1-210ENST00000492597 NISCHQ9Y2I1 1504 aa14.74□□□□□ -0.05
MCCC1-210ENST00000492597 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.25
MCCC1-210ENST00000492597 ABCC9O60706 1549 aa13.34□□□□□ -0.27
MCCC1-210ENST00000492597 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
MCCC1-210ENST00000492597 NACADO15069 1562 aa12.72□□□□□ -0.37
MCCC1-210ENST00000492597 UNC13AQ9UPW8 1703 aa12.58□□□□□ -0.4
MCCC1-210ENST00000492597 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
MCCC1-210ENST00000492597 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
MCCC1-210ENST00000492597 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
MCCC1-210ENST00000492597 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
MCCC1-210ENST00000492597 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
MCCC1-210ENST00000492597 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
MCCC1-210ENST00000492597 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
MCCC1-210ENST00000492597 CC2D2AQ9P2K1 1620 aa12.17□□□□□ -0.46
MCCC1-210ENST00000492597 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
MCCC1-210ENST00000492597 CECR2Q9BXF3 1484 aa12.1□□□□□ -0.47
MCCC1-210ENST00000492597 DCAF8L2P0C7V8 631 aa12.09□□□□□ -0.47
MCCC1-210ENST00000492597 SCRIBQ14160 1630 aa12.06□□□□□ -0.48
MCCC1-210ENST00000492597 HRCP23327 699 aa11.86□□□□□ -0.51
MCCC1-210ENST00000492597 CUX2O14529 1486 aa11.77□□□□□ -0.52
MCCC1-210ENST00000492597 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
MCCC1-210ENST00000492597 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
MCCC1-210ENST00000492597 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
MCCC1-210ENST00000492597 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
MCCC1-210ENST00000492597 PPARGC1BQ86YN6 1023 aaKnown RBP11.63□□□□□ -0.55
MCCC1-210ENST00000492597 SMARCA2P51531 1590 aa11.61□□□□□ -0.55
MCCC1-210ENST00000492597 PCGF6Q9BYE7 350 aa11.61□□□□□ -0.55
MCCC1-210ENST00000492597 SMARCA4P51532 1647 aa11.58□□□□□ -0.56
MCCC1-210ENST00000492597 ERCC6Q03468 1493 aa11.56□□□□□ -0.56
MCCC1-210ENST00000492597 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
MCCC1-210ENST00000492597 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
MCCC1-210ENST00000492597 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
MCCC1-210ENST00000492597 LAMC3Q9Y6N6 1575 aa11.5□□□□□ -0.57
MCCC1-210ENST00000492597 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
MCCC1-210ENST00000492597 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
MCCC1-210ENST00000492597 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
MCCC1-210ENST00000492597 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
MCCC1-210ENST00000492597 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
MCCC1-210ENST00000492597 NESP48681 1621 aa11.41□□□□□ -0.58
MCCC1-210ENST00000492597 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.58
MCCC1-210ENST00000492597 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
MCCC1-210ENST00000492597 WDR62O43379 1518 aa11.33□□□□□ -0.6
MCCC1-210ENST00000492597 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
MCCC1-210ENST00000492597 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
MCCC1-210ENST00000492597 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
MCCC1-210ENST00000492597 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
MCCC1-210ENST00000492597 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
MCCC1-210ENST00000492597 TRIM26Q12899 539 aaPredicted RBP11.22□□□□□ -0.61
MCCC1-210ENST00000492597 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.61
MCCC1-210ENST00000492597 WIZO95785 1651 aa11.2□□□□□ -0.62
MCCC1-210ENST00000492597 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
MCCC1-210ENST00000492597 TOP2AP11388 1531 aaKnown RBP11.15□□□□□ -0.62
MCCC1-210ENST00000492597 CFTRP13569 1480 aa11.12□□□□□ -0.63
MCCC1-210ENST00000492597 ZEB1P37275 1124 aaPredicted RBP11.12□□□□□ -0.63
MCCC1-210ENST00000492597 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
MCCC1-210ENST00000492597 URB2Q14146 1524 aaKnown RBP11.05□□□□□ -0.64
MCCC1-210ENST00000492597 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.64
MCCC1-210ENST00000492597 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.64
MCCC1-210ENST00000492597 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.64
MCCC1-210ENST00000492597 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
MCCC1-210ENST00000492597 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
MCCC1-210ENST00000492597 MYT1Q01538 1121 aa10.99□□□□□ -0.65
MCCC1-210ENST00000492597 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
MCCC1-210ENST00000492597 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.65
MCCC1-210ENST00000492597 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
MCCC1-210ENST00000492597 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
MCCC1-210ENST00000492597 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
MCCC1-210ENST00000492597 WDR97A6NE52 1622 aa10.94□□□□□ -0.66
MCCC1-210ENST00000492597 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
MCCC1-210ENST00000492597 ARHGEF11O15085 1522 aa10.93□□□□□ -0.66
MCCC1-210ENST00000492597 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
MCCC1-210ENST00000492597 CHD1O14646 1710 aa10.91□□□□□ -0.66
MCCC1-210ENST00000492597 TOPBP1Q92547 1522 aa10.91□□□□□ -0.66
MCCC1-210ENST00000492597 TARBP1Q13395 1621 aaKnown RBP10.9□□□□□ -0.66
MCCC1-210ENST00000492597 ZNF608Q9ULD9 1512 aaPredicted RBP10.88□□□□□ -0.67
MCCC1-210ENST00000492597 GTF3C3Q9Y5Q9 886 aa10.87□□□□□ -0.67
MCCC1-210ENST00000492597 CLASP1Q7Z460 1538 aa10.8□□□□□ -0.68
MCCC1-210ENST00000492597 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
MCCC1-210ENST00000492597 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
MCCC1-210ENST00000492597 EEA1Q15075 1411 aa10.77□□□□□ -0.68
MCCC1-210ENST00000492597 FAM9AQ8IZU1 332 aaPredicted RBP10.77□□□□□ -0.68
MCCC1-210ENST00000492597 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.69
MCCC1-210ENST00000492597 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
MCCC1-210ENST00000492597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
MCCC1-210ENST00000492597 DIEXFQ68CQ4 756 aaKnown RBP10.75□□□□□ -0.69
MCCC1-210ENST00000492597 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
MCCC1-210ENST00000492597 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
MCCC1-210ENST00000492597 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
MCCC1-210ENST00000492597 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
MCCC1-210ENST00000492597 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
MCCC1-210ENST00000492597 AQRO60306 1485 aaKnown RBP eCLIP10.71□□□□□ -0.7
MCCC1-210ENST00000492597 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
MCCC1-210ENST00000492597 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
MCCC1-210ENST00000492597 TOP2BQ02880 1626 aa10.67□□□□□ -0.7
MCCC1-210ENST00000492597 SYNJ2O15056 1496 aa10.67□□□□□ -0.7
MCCC1-210ENST00000492597 GRIN2BQ13224 1484 aa10.67□□□□□ -0.7
MCCC1-210ENST00000492597 FGD5Q6ZNL6 1462 aa10.67□□□□□ -0.7
MCCC1-210ENST00000492597 ABCA5Q8WWZ7 1642 aa10.67□□□□□ -0.7
MCCC1-210ENST00000492597 SOGA1O94964 1423 aa10.66□□□□□ -0.7
MCCC1-210ENST00000492597 CUX1P39880 1505 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms