RNA–Protein interactions for RNA: ENST00000492552.5

NR1D2-205, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

TSL 2

Gene NR1D2, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-205ENST00000492552 NISCHQ9Y2I1 1504 aa53.03■■■■■ 6.08
NR1D2-205ENST00000492552 CCDC180Q9P1Z9 1646 aa46.31■■■■■ 5
NR1D2-205ENST00000492552 ZCCHC6Q5VYS8 1495 aaKnown RBP44.49■■■■■ 4.71
NR1D2-205ENST00000492552 ABCC9O60706 1549 aa44.15■■■■■ 4.66
NR1D2-205ENST00000492552 DCAF8L2P0C7V8 631 aa44.01■■■■■ 4.64
NR1D2-205ENST00000492552 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
NR1D2-205ENST00000492552 MYO15BQ96JP2 1530 aa43.41■■■■■ 4.54
NR1D2-205ENST00000492552 NACADO15069 1562 aa43.25■■■■■ 4.51
NR1D2-205ENST00000492552 SHROOM4Q9ULL8 1493 aa43.15■■■■■ 4.5
NR1D2-205ENST00000492552 RB1CC1Q8TDY2 1594 aa42.96■■■■■ 4.47
NR1D2-205ENST00000492552 SCRIBQ14160 1630 aa42.62■■■■■ 4.41
NR1D2-205ENST00000492552 UNC13AQ9UPW8 1703 aa41.94■■■■■ 4.3
NR1D2-205ENST00000492552 BICRAQ9NZM4 1560 aa41.62■■■■■ 4.25
NR1D2-205ENST00000492552 PABPN1Q86U42 306 aaKnown RBP eCLIP41.61■■■■■ 4.25
NR1D2-205ENST00000492552 SUPT5HO00267 1087 aaKnown RBP41.4■■■■■ 4.22
NR1D2-205ENST00000492552 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
NR1D2-205ENST00000492552 RSF1Q96T23 1441 aaPredicted RBP41.05■■■■■ 4.16
NR1D2-205ENST00000492552 BAZ1AQ9NRL2 1556 aaPredicted RBP40.98■■■■■ 4.15
NR1D2-205ENST00000492552 MROH2BQ7Z745 1585 aa40.96■■■■■ 4.15
NR1D2-205ENST00000492552 SMARCA4P51532 1647 aa40.81■■■■■ 4.12
NR1D2-205ENST00000492552 WIZO95785 1651 aa40.58■■■■■ 4.09
NR1D2-205ENST00000492552 EIF4G1Q04637 1599 aaKnown RBP40.42■■■■■ 4.06
NR1D2-205ENST00000492552 PEG3Q9GZU2 1588 aa40.3■■■■■ 4.04
NR1D2-205ENST00000492552 ATAD2BQ9ULI0 1458 aa40.24■■■■■ 4.03
NR1D2-205ENST00000492552 SMARCA2P51531 1590 aa40.21■■■■■ 4.03
NR1D2-205ENST00000492552 TOP2AP11388 1531 aaKnown RBP40.19■■■■■ 4.02
NR1D2-205ENST00000492552 BAZ1BQ9UIG0 1483 aaKnown RBP40.02■■■■■ 4
NR1D2-205ENST00000492552 NCAPD3P42695 1498 aa39.93■■■■□ 3.98
NR1D2-205ENST00000492552 CC2D2AQ9P2K1 1620 aa39.89■■■■□ 3.98
NR1D2-205ENST00000492552 HMGXB3Q12766 1538 aa39.84■■■■□ 3.97
NR1D2-205ENST00000492552 CCDC88BA6NC98 1476 aa39.79■■■■□ 3.96
NR1D2-205ENST00000492552 CHIC1Q5VXU3 224 aa39.43■■■■□ 3.9
NR1D2-205ENST00000492552 DNAJC5BQ9UF47 199 aa39.15■■■■□ 3.86
NR1D2-205ENST00000492552 CFTRP13569 1480 aa38.98■■■■□ 3.83
NR1D2-205ENST00000492552 TRIM41Q8WV44 630 aa38.95■■■■□ 3.83
NR1D2-205ENST00000492552 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
NR1D2-205ENST00000492552 ABCC8Q09428 1581 aa38.85■■■■□ 3.81
NR1D2-205ENST00000492552 WRNQ14191 1432 aaPredicted RBP eCLIP38.68■■■■□ 3.78
NR1D2-205ENST00000492552 NESP48681 1621 aa38.64■■■■□ 3.78
NR1D2-205ENST00000492552 PRDM2Q13029 1718 aa38.63■■■■□ 3.77
NR1D2-205ENST00000492552 LAMC3Q9Y6N6 1575 aa38.6■■■■□ 3.77
NR1D2-205ENST00000492552 FANCD2Q9BXW9 1451 aa38.49■■■■□ 3.75
NR1D2-205ENST00000492552 SYNJ1O43426 1573 aa38.47■■■■□ 3.75
NR1D2-205ENST00000492552 PDS5BQ9NTI5 1447 aa38.38■■■■□ 3.73
NR1D2-205ENST00000492552 TOP2BQ02880 1626 aa38.34■■■■□ 3.73
NR1D2-205ENST00000492552 CUX1P39880 1505 aa38.32■■■■□ 3.72
NR1D2-205ENST00000492552 CEP164Q9UPV0 1460 aa38.28■■■■□ 3.72
NR1D2-205ENST00000492552 BIVM-ERCC5R4GMW8 1640 aa38.27■■■■□ 3.72
NR1D2-205ENST00000492552 FAM9AQ8IZU1 332 aaPredicted RBP38.23■■■■□ 3.71
NR1D2-205ENST00000492552 KIF21AQ7Z4S6 1674 aa38.11■■■■□ 3.69
NR1D2-205ENST00000492552 SOGA1O94964 1423 aa38.1■■■■□ 3.69
NR1D2-205ENST00000492552 DNMBPQ6XZF7 1577 aa38.06■■■■□ 3.68
NR1D2-205ENST00000492552 TOPBP1Q92547 1522 aa38.02■■■■□ 3.68
NR1D2-205ENST00000492552 URB2Q14146 1524 aaKnown RBP38■■■■□ 3.67
NR1D2-205ENST00000492552 EEA1Q15075 1411 aa37.97■■■■□ 3.67
NR1D2-205ENST00000492552 FGD5Q6ZNL6 1462 aa37.97■■■■□ 3.67
NR1D2-205ENST00000492552 RUSC2Q8N2Y8 1516 aa37.94■■■■□ 3.66
NR1D2-205ENST00000492552 LOC105371045A0A1W2PR82 267 aa37.93■■■■□ 3.66
NR1D2-205ENST00000492552 ERCC6Q03468 1493 aa37.92■■■■□ 3.66
NR1D2-205ENST00000492552 MRC2Q9UBG0 1479 aa37.88■■■■□ 3.65
NR1D2-205ENST00000492552 POLA1P09884 1462 aaPredicted RBP37.82■■■■□ 3.65
NR1D2-205ENST00000492552 CSRNP3Q8WYN3 585 aa37.81■■■■□ 3.64
NR1D2-205ENST00000492552 KIF27Q86VH2 1401 aa37.74■■■■□ 3.63
NR1D2-205ENST00000492552 EHMT2Q96KQ7 1210 aa37.73■■■■□ 3.63
NR1D2-205ENST00000492552 RAD54L2Q9Y4B4 1467 aa37.71■■■■□ 3.63
NR1D2-205ENST00000492552 CUX2O14529 1486 aa37.7■■■■□ 3.62
NR1D2-205ENST00000492552 WDR62O43379 1518 aa37.66■■■■□ 3.62
NR1D2-205ENST00000492552 ABCA10Q8WWZ4 1543 aa37.61■■■■□ 3.61
NR1D2-205ENST00000492552 THOC2Q8NI27 1593 aaKnown RBP37.58■■■■□ 3.61
NR1D2-205ENST00000492552 KIF21BO75037 1637 aa37.44■■■■□ 3.58
NR1D2-205ENST00000492552 GOLGA3Q08378 1498 aa37.44■■■■□ 3.58
NR1D2-205ENST00000492552 WDR97A6NE52 1622 aa37.44■■■■□ 3.58
NR1D2-205ENST00000492552 TARBP1Q13395 1621 aaKnown RBP37.43■■■■□ 3.58
NR1D2-205ENST00000492552 IGF1RP08069 1367 aa37.41■■■■□ 3.58
NR1D2-205ENST00000492552 TDRD9Q8NDG6 1382 aaKnown RBP37.39■■■■□ 3.58
NR1D2-205ENST00000492552 IFT140Q96RY7 1462 aa37.38■■■■□ 3.57
NR1D2-205ENST00000492552 PRXQ9BXM0 1461 aa37.37■■■■□ 3.57
NR1D2-205ENST00000492552 UBTFP17480 764 aaKnown RBP37.35■■■■□ 3.57
NR1D2-205ENST00000492552 RAPGEF2Q9Y4G8 1499 aa37.33■■■■□ 3.57
NR1D2-205ENST00000492552 ABCA5Q8WWZ7 1642 aa37.3■■■■□ 3.56
NR1D2-205ENST00000492552 GAPVD1Q14C86 1478 aa37.29■■■■□ 3.56
NR1D2-205ENST00000492552 TNIKQ9UKE5 1360 aa37.26■■■■□ 3.56
NR1D2-205ENST00000492552 ERICH3Q5RHP9 1530 aa37.26■■■■□ 3.56
NR1D2-205ENST00000492552 CARMIL1Q5VZK9 1371 aa37.23■■■■□ 3.55
NR1D2-205ENST00000492552 AQRO60306 1485 aaKnown RBP eCLIP37.19■■■■□ 3.54
NR1D2-205ENST00000492552 ZNF608Q9ULD9 1512 aaPredicted RBP37.17■■■■□ 3.54
NR1D2-205ENST00000492552 CUL7Q14999 1698 aa37.1■■■■□ 3.53
NR1D2-205ENST00000492552 CEP162Q5TB80 1403 aa37.06■■■■□ 3.52
NR1D2-205ENST00000492552 GRIN2BQ13224 1484 aa37.05■■■■□ 3.52
NR1D2-205ENST00000492552 PBRM1Q86U86 1689 aa37.01■■■■□ 3.52
NR1D2-205ENST00000492552 EIF4G3O43432 1585 aaKnown RBP37.01■■■■□ 3.52
NR1D2-205ENST00000492552 FHAD1B1AJZ9 1412 aa36.89■■■■□ 3.5
NR1D2-205ENST00000492552 RANGAP1P46060 587 aaPredicted RBP36.85■■■■□ 3.49
NR1D2-205ENST00000492552 ADAMTS12P58397 1594 aa36.85■■■■□ 3.49
NR1D2-205ENST00000492552 CLIP1P30622 1438 aa36.85■■■■□ 3.49
NR1D2-205ENST00000492552 SNAPC4Q5SXM2 1469 aa36.83■■■■□ 3.49
NR1D2-205ENST00000492552 MAGI1Q96QZ7 1491 aaPredicted RBP36.75■■■■□ 3.47
NR1D2-205ENST00000492552 SYNJ2O15056 1496 aa36.62■■■■□ 3.45
NR1D2-205ENST00000492552 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
NR1D2-205ENST00000492552 CTTNBP2Q8WZ74 1663 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms