RNA–Protein interactions for RNA: ENST00000492364.1

PDHA1-211, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2

Gene PDHA1, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-211ENST00000492364 NISCHQ9Y2I1 1504 aa32.9■■■□□ 2.86
PDHA1-211ENST00000492364 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
PDHA1-211ENST00000492364 ABCC9O60706 1549 aa29.18■■■□□ 2.26
PDHA1-211ENST00000492364 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
PDHA1-211ENST00000492364 NACADO15069 1562 aa27.83■■■□□ 2.05
PDHA1-211ENST00000492364 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
PDHA1-211ENST00000492364 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
PDHA1-211ENST00000492364 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
PDHA1-211ENST00000492364 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
PDHA1-211ENST00000492364 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
PDHA1-211ENST00000492364 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
PDHA1-211ENST00000492364 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
PDHA1-211ENST00000492364 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
PDHA1-211ENST00000492364 SHROOM4Q9ULL8 1493 aa26.86■■□□□ 1.89
PDHA1-211ENST00000492364 SCRIBQ14160 1630 aa26.84■■□□□ 1.89
PDHA1-211ENST00000492364 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
PDHA1-211ENST00000492364 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
PDHA1-211ENST00000492364 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
PDHA1-211ENST00000492364 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
PDHA1-211ENST00000492364 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
PDHA1-211ENST00000492364 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
PDHA1-211ENST00000492364 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
PDHA1-211ENST00000492364 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
PDHA1-211ENST00000492364 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
PDHA1-211ENST00000492364 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
PDHA1-211ENST00000492364 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
PDHA1-211ENST00000492364 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
PDHA1-211ENST00000492364 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
PDHA1-211ENST00000492364 CUX2O14529 1486 aa25.15■■□□□ 1.62
PDHA1-211ENST00000492364 NESP48681 1621 aa25.13■■□□□ 1.61
PDHA1-211ENST00000492364 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
PDHA1-211ENST00000492364 WIZO95785 1651 aa25.08■■□□□ 1.61
PDHA1-211ENST00000492364 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
PDHA1-211ENST00000492364 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
PDHA1-211ENST00000492364 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
PDHA1-211ENST00000492364 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
PDHA1-211ENST00000492364 CADPSQ9ULU8 1353 aa24.83■■□□□ 1.57
PDHA1-211ENST00000492364 DNAJC5Q9H3Z4 198 aa24.8■■□□□ 1.56
PDHA1-211ENST00000492364 TOP2AP11388 1531 aaKnown RBP24.78■■□□□ 1.56
PDHA1-211ENST00000492364 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
PDHA1-211ENST00000492364 WDR62O43379 1518 aa24.63■■□□□ 1.53
PDHA1-211ENST00000492364 CFTRP13569 1480 aa24.63■■□□□ 1.53
PDHA1-211ENST00000492364 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
PDHA1-211ENST00000492364 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
PDHA1-211ENST00000492364 FANCD2Q9BXW9 1451 aa24.57■■□□□ 1.52
PDHA1-211ENST00000492364 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
PDHA1-211ENST00000492364 URB2Q14146 1524 aaKnown RBP24.36■■□□□ 1.49
PDHA1-211ENST00000492364 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
PDHA1-211ENST00000492364 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
PDHA1-211ENST00000492364 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
PDHA1-211ENST00000492364 IFT140Q96RY7 1462 aa24.1■■□□□ 1.45
PDHA1-211ENST00000492364 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
PDHA1-211ENST00000492364 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
PDHA1-211ENST00000492364 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
PDHA1-211ENST00000492364 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
PDHA1-211ENST00000492364 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
PDHA1-211ENST00000492364 CHD1O14646 1710 aa23.81■■□□□ 1.4
PDHA1-211ENST00000492364 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
PDHA1-211ENST00000492364 CUX1P39880 1505 aa23.79■■□□□ 1.4
PDHA1-211ENST00000492364 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
PDHA1-211ENST00000492364 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.46e-6■■■■□ 25.1
PDHA1-211ENST00000492364 FGD5Q6ZNL6 1462 aa23.78■■□□□ 1.4
PDHA1-211ENST00000492364 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
PDHA1-211ENST00000492364 SOGA1O94964 1423 aa23.76■■□□□ 1.39
PDHA1-211ENST00000492364 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
PDHA1-211ENST00000492364 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
PDHA1-211ENST00000492364 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
PDHA1-211ENST00000492364 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
PDHA1-211ENST00000492364 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
PDHA1-211ENST00000492364 ARHGEF11O15085 1522 aa23.63■■□□□ 1.37
PDHA1-211ENST00000492364 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
PDHA1-211ENST00000492364 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
PDHA1-211ENST00000492364 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
PDHA1-211ENST00000492364 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
PDHA1-211ENST00000492364 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
PDHA1-211ENST00000492364 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
PDHA1-211ENST00000492364 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
PDHA1-211ENST00000492364 TOP2BQ02880 1626 aa23.53■■□□□ 1.36
PDHA1-211ENST00000492364 FBLN2P98095 1184 aa23.52■■□□□ 1.36
PDHA1-211ENST00000492364 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
PDHA1-211ENST00000492364 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
PDHA1-211ENST00000492364 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
PDHA1-211ENST00000492364 CLASP1Q7Z460 1538 aa23.48■■□□□ 1.35
PDHA1-211ENST00000492364 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
PDHA1-211ENST00000492364 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
PDHA1-211ENST00000492364 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
PDHA1-211ENST00000492364 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
PDHA1-211ENST00000492364 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
PDHA1-211ENST00000492364 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
PDHA1-211ENST00000492364 GRIN2AQ12879 1464 aa23.27■■□□□ 1.32
PDHA1-211ENST00000492364 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
PDHA1-211ENST00000492364 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
PDHA1-211ENST00000492364 NUP160Q12769 1436 aa23.18■■□□□ 1.3
PDHA1-211ENST00000492364 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
PDHA1-211ENST00000492364 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
PDHA1-211ENST00000492364 CUL7Q14999 1698 aa23.03■■□□□ 1.28
PDHA1-211ENST00000492364 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
PDHA1-211ENST00000492364 KIF27Q86VH2 1401 aa22.99■■□□□ 1.27
PDHA1-211ENST00000492364 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
PDHA1-211ENST00000492364 IGF1RP08069 1367 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms