RNA–Protein interactions for RNA: ENST00000492277.5

RPL29-208, Transcript of ribosomal protein L29, humanhuman

TSL 3

Gene RPL29, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL29-208ENST00000492277 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
RPL29-208ENST00000492277 ABCC9O60706 1549 aa37.83■■■■□ 3.65
RPL29-208ENST00000492277 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
RPL29-208ENST00000492277 DNAJC5BQ9UF47 199 aa36.19■■■■□ 3.38
RPL29-208ENST00000492277 RB1CC1Q8TDY2 1594 aa35.62■■■■□ 3.29
RPL29-208ENST00000492277 NACADO15069 1562 aa35.19■■■■□ 3.22
RPL29-208ENST00000492277 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.21
RPL29-208ENST00000492277 DCAF8L2P0C7V8 631 aa34.93■■■■□ 3.18
RPL29-208ENST00000492277 UNC13AQ9UPW8 1703 aa34.87■■■■□ 3.17
RPL29-208ENST00000492277 BICRAQ9NZM4 1560 aa34.67■■■■□ 3.14
RPL29-208ENST00000492277 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
RPL29-208ENST00000492277 CECR2Q9BXF3 1484 aa34.13■■■■□ 3.05
RPL29-208ENST00000492277 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
RPL29-208ENST00000492277 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
RPL29-208ENST00000492277 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
RPL29-208ENST00000492277 ZCCHC6Q5VYS8 1495 aaKnown RBP33.8■■■■□ 3
RPL29-208ENST00000492277 SCRIBQ14160 1630 aa33.78■■■■□ 3
RPL29-208ENST00000492277 DCAF1Q9Y4B6 1507 aa33.74■■■□□ 2.99
RPL29-208ENST00000492277 DNAJC5Q9H3Z4 198 aa33.68■■■□□ 2.98
RPL29-208ENST00000492277 CUX2O14529 1486 aa32.83■■■□□ 2.85
RPL29-208ENST00000492277 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
RPL29-208ENST00000492277 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
RPL29-208ENST00000492277 ATAD2BQ9ULI0 1458 aa32.35■■■□□ 2.77
RPL29-208ENST00000492277 NESP48681 1621 aa32.32■■■□□ 2.76
RPL29-208ENST00000492277 HMGXB3Q12766 1538 aa32.2■■■□□ 2.74
RPL29-208ENST00000492277 SMARCA2P51531 1590 aa32.16■■■□□ 2.74
RPL29-208ENST00000492277 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
RPL29-208ENST00000492277 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
RPL29-208ENST00000492277 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
RPL29-208ENST00000492277 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
RPL29-208ENST00000492277 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
RPL29-208ENST00000492277 KIF21AQ7Z4S6 1674 aa31.84■■■□□ 2.69
RPL29-208ENST00000492277 BAZ1AQ9NRL2 1556 aaPredicted RBP31.82■■■□□ 2.68
RPL29-208ENST00000492277 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
RPL29-208ENST00000492277 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
RPL29-208ENST00000492277 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
RPL29-208ENST00000492277 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
RPL29-208ENST00000492277 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
RPL29-208ENST00000492277 WDR62O43379 1518 aa31.47■■■□□ 2.63
RPL29-208ENST00000492277 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
RPL29-208ENST00000492277 OSCARQ8IYS5 282 aa31.23■■■□□ 2.59
RPL29-208ENST00000492277 WIZO95785 1651 aa31.19■■■□□ 2.58
RPL29-208ENST00000492277 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
RPL29-208ENST00000492277 CFTRP13569 1480 aa31■■■□□ 2.55
RPL29-208ENST00000492277 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
RPL29-208ENST00000492277 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
RPL29-208ENST00000492277 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
RPL29-208ENST00000492277 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
RPL29-208ENST00000492277 ARHGEF11O15085 1522 aa30.76■■■□□ 2.51
RPL29-208ENST00000492277 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
RPL29-208ENST00000492277 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
RPL29-208ENST00000492277 RSF1Q96T23 1441 aaPredicted RBP30.66■■■□□ 2.5
RPL29-208ENST00000492277 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
RPL29-208ENST00000492277 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
RPL29-208ENST00000492277 CYB5RLQ6IPT4 315 aa30.59■■■□□ 2.49
RPL29-208ENST00000492277 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
RPL29-208ENST00000492277 TOPBP1Q92547 1522 aa30.49■■■□□ 2.47
RPL29-208ENST00000492277 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
RPL29-208ENST00000492277 ARAP1Q96P48 1450 aa30.43■■■□□ 2.46
RPL29-208ENST00000492277 CHD1O14646 1710 aa30.41■■■□□ 2.46
RPL29-208ENST00000492277 CCDC88BA6NC98 1476 aa30.39■■■□□ 2.46
RPL29-208ENST00000492277 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.451e-8■■■■□ 25.8
RPL29-208ENST00000492277 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
RPL29-208ENST00000492277 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
RPL29-208ENST00000492277 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
RPL29-208ENST00000492277 FBLN2P98095 1184 aa30.28■■■□□ 2.44
RPL29-208ENST00000492277 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
RPL29-208ENST00000492277 AEBP2Q6ZN18 517 aaPredicted RBP30.08■■■□□ 2.41
RPL29-208ENST00000492277 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
RPL29-208ENST00000492277 TDRD9Q8NDG6 1382 aaKnown RBP30.04■■■□□ 2.4
RPL29-208ENST00000492277 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
RPL29-208ENST00000492277 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
RPL29-208ENST00000492277 SOGA1O94964 1423 aa29.97■■■□□ 2.39
RPL29-208ENST00000492277 SYNJ1O43426 1573 aa29.91■■■□□ 2.38
RPL29-208ENST00000492277 CHMP7Q8WUX9 453 aaPredicted RBP29.91■■■□□ 2.38
RPL29-208ENST00000492277 FGD5Q6ZNL6 1462 aa29.85■■■□□ 2.37
RPL29-208ENST00000492277 MAGI1Q96QZ7 1491 aaPredicted RBP29.85■■■□□ 2.37
RPL29-208ENST00000492277 WDR97A6NE52 1622 aa29.84■■■□□ 2.37
RPL29-208ENST00000492277 GRIN2BQ13224 1484 aa29.79■■■□□ 2.36
RPL29-208ENST00000492277 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
RPL29-208ENST00000492277 GAPVD1Q14C86 1478 aa29.75■■■□□ 2.35
RPL29-208ENST00000492277 CUX1P39880 1505 aa29.73■■■□□ 2.35
RPL29-208ENST00000492277 PBRM1Q86U86 1689 aa29.64■■■□□ 2.34
RPL29-208ENST00000492277 ERCC6L2Q5T890 1561 aa29.57■■■□□ 2.32
RPL29-208ENST00000492277 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
RPL29-208ENST00000492277 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
RPL29-208ENST00000492277 GRIN2AQ12879 1464 aa29.42■■■□□ 2.3
RPL29-208ENST00000492277 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
RPL29-208ENST00000492277 NUP160Q12769 1436 aa29.35■■■□□ 2.29
RPL29-208ENST00000492277 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
RPL29-208ENST00000492277 ADAMTS12P58397 1594 aa29.32■■■□□ 2.28
RPL29-208ENST00000492277 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
RPL29-208ENST00000492277 FHAD1B1AJZ9 1412 aa29.18■■■□□ 2.26
RPL29-208ENST00000492277 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
RPL29-208ENST00000492277 PRG4Q92954 1404 aaPredicted RBP29.13■■■□□ 2.25
RPL29-208ENST00000492277 FAM69CQ0P6D2 419 aa29.09■■■□□ 2.25
RPL29-208ENST00000492277 ABCC10Q5T3U5 1492 aa29.06■■■□□ 2.24
RPL29-208ENST00000492277 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
RPL29-208ENST00000492277 JPH4Q96JJ6 628 aa29.04■■■□□ 2.24
RPL29-208ENST00000492277 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms