RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
TMEM50A-205ENST00000491936 AEBP2Q6ZN18 517 aaPredicted RBP32.35■■■□□ 2.77
TMEM50A-205ENST00000491936 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
TMEM50A-205ENST00000491936 CCDC180Q9P1Z9 1646 aa29.7■■■□□ 2.34
TMEM50A-205ENST00000491936 ABCC9O60706 1549 aa29.37■■■□□ 2.29
TMEM50A-205ENST00000491936 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
TMEM50A-205ENST00000491936 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
TMEM50A-205ENST00000491936 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
TMEM50A-205ENST00000491936 NACADO15069 1562 aa27.98■■■□□ 2.07
TMEM50A-205ENST00000491936 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
TMEM50A-205ENST00000491936 SENP3Q9H4L4 574 aaPredicted RBP27.72■■■□□ 2.03
TMEM50A-205ENST00000491936 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
TMEM50A-205ENST00000491936 UNC13AQ9UPW8 1703 aa27.54■■■□□ 2
TMEM50A-205ENST00000491936 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
TMEM50A-205ENST00000491936 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
TMEM50A-205ENST00000491936 DNAJC5BQ9UF47 199 aa27.33■■□□□ 1.97
TMEM50A-205ENST00000491936 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
TMEM50A-205ENST00000491936 PHF23Q9BUL5 403 aaPredicted RBP27.3■■□□□ 1.96
TMEM50A-205ENST00000491936 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
TMEM50A-205ENST00000491936 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
TMEM50A-205ENST00000491936 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
TMEM50A-205ENST00000491936 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
TMEM50A-205ENST00000491936 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
TMEM50A-205ENST00000491936 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
TMEM50A-205ENST00000491936 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
TMEM50A-205ENST00000491936 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
TMEM50A-205ENST00000491936 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
TMEM50A-205ENST00000491936 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
TMEM50A-205ENST00000491936 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
TMEM50A-205ENST00000491936 FOXD1Q16676 465 aa25.79■■□□□ 1.72
TMEM50A-205ENST00000491936 WIZO95785 1651 aa25.76■■□□□ 1.71
TMEM50A-205ENST00000491936 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
TMEM50A-205ENST00000491936 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
TMEM50A-205ENST00000491936 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
TMEM50A-205ENST00000491936 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
TMEM50A-205ENST00000491936 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
TMEM50A-205ENST00000491936 NESP48681 1621 aa25.34■■□□□ 1.65
TMEM50A-205ENST00000491936 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
TMEM50A-205ENST00000491936 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
TMEM50A-205ENST00000491936 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
TMEM50A-205ENST00000491936 CUX2O14529 1486 aa25.18■■□□□ 1.62
TMEM50A-205ENST00000491936 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
TMEM50A-205ENST00000491936 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
TMEM50A-205ENST00000491936 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
TMEM50A-205ENST00000491936 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
TMEM50A-205ENST00000491936 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
TMEM50A-205ENST00000491936 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
TMEM50A-205ENST00000491936 CFTRP13569 1480 aa24.83■■□□□ 1.57
TMEM50A-205ENST00000491936 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
TMEM50A-205ENST00000491936 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
TMEM50A-205ENST00000491936 WDR62O43379 1518 aa24.76■■□□□ 1.55
TMEM50A-205ENST00000491936 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
TMEM50A-205ENST00000491936 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
TMEM50A-205ENST00000491936 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
TMEM50A-205ENST00000491936 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
TMEM50A-205ENST00000491936 EEA1Q15075 1411 aa24.59■■□□□ 1.53
TMEM50A-205ENST00000491936 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
TMEM50A-205ENST00000491936 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
TMEM50A-205ENST00000491936 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
TMEM50A-205ENST00000491936 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
TMEM50A-205ENST00000491936 PLPPR3Q6T4P5 718 aa24.47■■□□□ 1.51
TMEM50A-205ENST00000491936 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
TMEM50A-205ENST00000491936 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
TMEM50A-205ENST00000491936 SOGA1O94964 1423 aa24.35■■□□□ 1.49
TMEM50A-205ENST00000491936 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
TMEM50A-205ENST00000491936 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
TMEM50A-205ENST00000491936 CUX1P39880 1505 aa24.31■■□□□ 1.48
TMEM50A-205ENST00000491936 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
TMEM50A-205ENST00000491936 MSH5O43196 834 aa24.27■■□□□ 1.48
TMEM50A-205ENST00000491936 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
TMEM50A-205ENST00000491936 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
TMEM50A-205ENST00000491936 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.47
TMEM50A-205ENST00000491936 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
TMEM50A-205ENST00000491936 KIF21BO75037 1637 aa24.13■■□□□ 1.45
TMEM50A-205ENST00000491936 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
TMEM50A-205ENST00000491936 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
TMEM50A-205ENST00000491936 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
TMEM50A-205ENST00000491936 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
TMEM50A-205ENST00000491936 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
TMEM50A-205ENST00000491936 PIAS4Q8N2W9 510 aaPredicted RBP24.08■■□□□ 1.45
TMEM50A-205ENST00000491936 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
TMEM50A-205ENST00000491936 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
TMEM50A-205ENST00000491936 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
TMEM50A-205ENST00000491936 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.433e-6■■□□□ 14.2
TMEM50A-205ENST00000491936 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
TMEM50A-205ENST00000491936 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
TMEM50A-205ENST00000491936 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
TMEM50A-205ENST00000491936 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
TMEM50A-205ENST00000491936 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
TMEM50A-205ENST00000491936 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
TMEM50A-205ENST00000491936 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
TMEM50A-205ENST00000491936 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
TMEM50A-205ENST00000491936 ADRA2BP18089 450 aa23.9■■□□□ 1.42
TMEM50A-205ENST00000491936 CHD1O14646 1710 aa23.88■■□□□ 1.41
TMEM50A-205ENST00000491936 RAPGEF2Q9Y4G8 1499 aa23.87■■□□□ 1.41
TMEM50A-205ENST00000491936 WDR97A6NE52 1622 aa23.87■■□□□ 1.41
TMEM50A-205ENST00000491936 IGF1RP08069 1367 aa23.86■■□□□ 1.41
TMEM50A-205ENST00000491936 POTEDQ86YR6 584 aa23.85■■□□□ 1.41
TMEM50A-205ENST00000491936 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
TMEM50A-205ENST00000491936 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms