RNA–Protein interactions for RNA: ENST00000491908.1

TCAF1-207, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-207ENST00000491908 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
TCAF1-207ENST00000491908 CCDC180Q9P1Z9 1646 aa21.64■■□□□ 1.05
TCAF1-207ENST00000491908 ABCC9O60706 1549 aa21.2■□□□□ 0.98
TCAF1-207ENST00000491908 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
TCAF1-207ENST00000491908 NACADO15069 1562 aa20.36■□□□□ 0.85
TCAF1-207ENST00000491908 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
TCAF1-207ENST00000491908 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
TCAF1-207ENST00000491908 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
TCAF1-207ENST00000491908 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
TCAF1-207ENST00000491908 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
TCAF1-207ENST00000491908 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
TCAF1-207ENST00000491908 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
TCAF1-207ENST00000491908 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
TCAF1-207ENST00000491908 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
TCAF1-207ENST00000491908 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
TCAF1-207ENST00000491908 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
TCAF1-207ENST00000491908 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
TCAF1-207ENST00000491908 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
TCAF1-207ENST00000491908 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
TCAF1-207ENST00000491908 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
TCAF1-207ENST00000491908 SMARCA2P51531 1590 aa18.79■□□□□ 0.6
TCAF1-207ENST00000491908 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
TCAF1-207ENST00000491908 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
TCAF1-207ENST00000491908 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
TCAF1-207ENST00000491908 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
TCAF1-207ENST00000491908 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
TCAF1-207ENST00000491908 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
TCAF1-207ENST00000491908 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
TCAF1-207ENST00000491908 WIZO95785 1651 aa18.5■□□□□ 0.55
TCAF1-207ENST00000491908 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
TCAF1-207ENST00000491908 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
TCAF1-207ENST00000491908 NESP48681 1621 aa18.31■□□□□ 0.52
TCAF1-207ENST00000491908 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
TCAF1-207ENST00000491908 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
TCAF1-207ENST00000491908 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
TCAF1-207ENST00000491908 CUX2O14529 1486 aa18.13■□□□□ 0.49
TCAF1-207ENST00000491908 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
TCAF1-207ENST00000491908 CFTRP13569 1480 aa18.11■□□□□ 0.49
TCAF1-207ENST00000491908 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
TCAF1-207ENST00000491908 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
TCAF1-207ENST00000491908 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
TCAF1-207ENST00000491908 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
TCAF1-207ENST00000491908 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.48
TCAF1-207ENST00000491908 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
TCAF1-207ENST00000491908 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
TCAF1-207ENST00000491908 WDR62O43379 1518 aa17.94■□□□□ 0.46
TCAF1-207ENST00000491908 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
TCAF1-207ENST00000491908 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
TCAF1-207ENST00000491908 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
TCAF1-207ENST00000491908 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
TCAF1-207ENST00000491908 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
TCAF1-207ENST00000491908 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
TCAF1-207ENST00000491908 CUX1P39880 1505 aa17.58■□□□□ 0.41
TCAF1-207ENST00000491908 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
TCAF1-207ENST00000491908 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
TCAF1-207ENST00000491908 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
TCAF1-207ENST00000491908 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
TCAF1-207ENST00000491908 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
TCAF1-207ENST00000491908 SOGA1O94964 1423 aa17.5■□□□□ 0.39
TCAF1-207ENST00000491908 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
TCAF1-207ENST00000491908 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
TCAF1-207ENST00000491908 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
TCAF1-207ENST00000491908 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
TCAF1-207ENST00000491908 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
TCAF1-207ENST00000491908 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
TCAF1-207ENST00000491908 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
TCAF1-207ENST00000491908 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
TCAF1-207ENST00000491908 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
TCAF1-207ENST00000491908 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
TCAF1-207ENST00000491908 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
TCAF1-207ENST00000491908 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
TCAF1-207ENST00000491908 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
TCAF1-207ENST00000491908 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
TCAF1-207ENST00000491908 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
TCAF1-207ENST00000491908 FBLN2P98095 1184 aa17.26■□□□□ 0.35
TCAF1-207ENST00000491908 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
TCAF1-207ENST00000491908 CHD1O14646 1710 aa17.24■□□□□ 0.35
TCAF1-207ENST00000491908 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
TCAF1-207ENST00000491908 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
TCAF1-207ENST00000491908 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
TCAF1-207ENST00000491908 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
TCAF1-207ENST00000491908 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
TCAF1-207ENST00000491908 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
TCAF1-207ENST00000491908 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
TCAF1-207ENST00000491908 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
TCAF1-207ENST00000491908 ARHGEF11O15085 1522 aa17.07■□□□□ 0.32
TCAF1-207ENST00000491908 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
TCAF1-207ENST00000491908 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
TCAF1-207ENST00000491908 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
TCAF1-207ENST00000491908 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
TCAF1-207ENST00000491908 NUP160Q12769 1436 aa17.02■□□□□ 0.31
TCAF1-207ENST00000491908 IGF1RP08069 1367 aa17.01■□□□□ 0.31
TCAF1-207ENST00000491908 CUL7Q14999 1698 aa17.01■□□□□ 0.31
TCAF1-207ENST00000491908 CEP170Q5SW79 1584 aa17■□□□□ 0.31
TCAF1-207ENST00000491908 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
TCAF1-207ENST00000491908 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
TCAF1-207ENST00000491908 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
TCAF1-207ENST00000491908 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
TCAF1-207ENST00000491908 SHROOM2Q13796 1616 aa16.87■□□□□ 0.29
TCAF1-207ENST00000491908 KIAA0586Q9BVV6 1533 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms