RNA–Protein interactions for RNA: ENST00000491569.5

ATP6AP1-209, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 2

Gene ATP6AP1, Length 2,079 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-209ENST00000491569 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
ATP6AP1-209ENST00000491569 CCDC180Q9P1Z9 1646 aa40.77■■■■■ 4.12
ATP6AP1-209ENST00000491569 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
ATP6AP1-209ENST00000491569 DCAF8L2P0C7V8 631 aa38.98■■■■□ 3.83
ATP6AP1-209ENST00000491569 ABCC9O60706 1549 aa38.94■■■■□ 3.82
ATP6AP1-209ENST00000491569 DCAF1Q9Y4B6 1507 aa38.61■■■■□ 3.77
ATP6AP1-209ENST00000491569 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
ATP6AP1-209ENST00000491569 MYO15BQ96JP2 1530 aa38.18■■■■□ 3.7
ATP6AP1-209ENST00000491569 NACADO15069 1562 aa38.06■■■■□ 3.68
ATP6AP1-209ENST00000491569 RB1CC1Q8TDY2 1594 aa37.79■■■■□ 3.64
ATP6AP1-209ENST00000491569 SCRIBQ14160 1630 aa37.67■■■■□ 3.62
ATP6AP1-209ENST00000491569 UNC13AQ9UPW8 1703 aa37.04■■■■□ 3.52
ATP6AP1-209ENST00000491569 SUPT5HO00267 1087 aaKnown RBP36.82■■■■□ 3.49
ATP6AP1-209ENST00000491569 PABPN1Q86U42 306 aaKnown RBP eCLIP36.78■■■■□ 3.48
ATP6AP1-209ENST00000491569 BICRAQ9NZM4 1560 aa36.71■■■■□ 3.47
ATP6AP1-209ENST00000491569 CECR2Q9BXF3 1484 aa36.52■■■■□ 3.44
ATP6AP1-209ENST00000491569 RSF1Q96T23 1441 aaPredicted RBP36.35■■■■□ 3.41
ATP6AP1-209ENST00000491569 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
ATP6AP1-209ENST00000491569 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
ATP6AP1-209ENST00000491569 SMARCA4P51532 1647 aa36.02■■■■□ 3.36
ATP6AP1-209ENST00000491569 WIZO95785 1651 aa35.94■■■■□ 3.34
ATP6AP1-209ENST00000491569 EIF4G1Q04637 1599 aaKnown RBP35.62■■■■□ 3.29
ATP6AP1-209ENST00000491569 PEG3Q9GZU2 1588 aa35.52■■■■□ 3.28
ATP6AP1-209ENST00000491569 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.28
ATP6AP1-209ENST00000491569 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
ATP6AP1-209ENST00000491569 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
ATP6AP1-209ENST00000491569 BAZ1BQ9UIG0 1483 aaKnown RBP35.29■■■■□ 3.24
ATP6AP1-209ENST00000491569 CCDC88BA6NC98 1476 aa35.2■■■■□ 3.23
ATP6AP1-209ENST00000491569 NCAPD3P42695 1498 aa35.18■■■■□ 3.22
ATP6AP1-209ENST00000491569 CC2D2AQ9P2K1 1620 aa35.15■■■■□ 3.22
ATP6AP1-209ENST00000491569 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
ATP6AP1-209ENST00000491569 HMGXB3Q12766 1538 aa35.07■■■■□ 3.21
ATP6AP1-209ENST00000491569 DNAJC5BQ9UF47 199 aa34.56■■■■□ 3.12
ATP6AP1-209ENST00000491569 TRIM41Q8WV44 630 aa34.55■■■■□ 3.12
ATP6AP1-209ENST00000491569 ABCC8Q09428 1581 aa34.46■■■■□ 3.11
ATP6AP1-209ENST00000491569 CFTRP13569 1480 aa34.39■■■■□ 3.1
ATP6AP1-209ENST00000491569 CADPSQ9ULU8 1353 aa34.32■■■■□ 3.09
ATP6AP1-209ENST00000491569 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.07
ATP6AP1-209ENST00000491569 NESP48681 1621 aa34.15■■■■□ 3.06
ATP6AP1-209ENST00000491569 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
ATP6AP1-209ENST00000491569 PRDM2Q13029 1718 aa34.05■■■■□ 3.04
ATP6AP1-209ENST00000491569 FAM9AQ8IZU1 332 aaPredicted RBP34.04■■■■□ 3.04
ATP6AP1-209ENST00000491569 LAMC3Q9Y6N6 1575 aa33.96■■■■□ 3.03
ATP6AP1-209ENST00000491569 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.03
ATP6AP1-209ENST00000491569 CUX1P39880 1505 aa33.89■■■■□ 3.02
ATP6AP1-209ENST00000491569 TOP2BQ02880 1626 aa33.87■■■■□ 3.01
ATP6AP1-209ENST00000491569 LOC105371045A0A1W2PR82 267 aa33.86■■■■□ 3.01
ATP6AP1-209ENST00000491569 SOGA1O94964 1423 aa33.81■■■■□ 3
ATP6AP1-209ENST00000491569 BIVM-ERCC5R4GMW8 1640 aa33.81■■■■□ 3
ATP6AP1-209ENST00000491569 PDS5BQ9NTI5 1447 aa33.77■■■■□ 3
ATP6AP1-209ENST00000491569 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
ATP6AP1-209ENST00000491569 RUSC2Q8N2Y8 1516 aa33.71■■■□□ 2.99
ATP6AP1-209ENST00000491569 EHMT2Q96KQ7 1210 aa33.66■■■□□ 2.98
ATP6AP1-209ENST00000491569 KIF21AQ7Z4S6 1674 aa33.62■■■□□ 2.97
ATP6AP1-209ENST00000491569 TOPBP1Q92547 1522 aa33.55■■■□□ 2.96
ATP6AP1-209ENST00000491569 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
ATP6AP1-209ENST00000491569 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
ATP6AP1-209ENST00000491569 EEA1Q15075 1411 aa33.54■■■□□ 2.96
ATP6AP1-209ENST00000491569 FGD5Q6ZNL6 1462 aa33.54■■■□□ 2.96
ATP6AP1-209ENST00000491569 CSRNP3Q8WYN3 585 aa33.51■■■□□ 2.96
ATP6AP1-209ENST00000491569 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
ATP6AP1-209ENST00000491569 RAD54L2Q9Y4B4 1467 aa33.36■■■□□ 2.93
ATP6AP1-209ENST00000491569 ERCC6Q03468 1493 aa33.35■■■□□ 2.93
ATP6AP1-209ENST00000491569 MRC2Q9UBG0 1479 aa33.34■■■□□ 2.93
ATP6AP1-209ENST00000491569 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
ATP6AP1-209ENST00000491569 CUX2O14529 1486 aa33.32■■■□□ 2.92
ATP6AP1-209ENST00000491569 ABCA10Q8WWZ4 1543 aa33.19■■■□□ 2.9
ATP6AP1-209ENST00000491569 WDR62O43379 1518 aa33.14■■■□□ 2.9
ATP6AP1-209ENST00000491569 GOLGA3Q08378 1498 aa33.14■■■□□ 2.9
ATP6AP1-209ENST00000491569 UBTFP17480 764 aaKnown RBP33.13■■■□□ 2.89
ATP6AP1-209ENST00000491569 KIF21BO75037 1637 aa33.12■■■□□ 2.89
ATP6AP1-209ENST00000491569 IGF1RP08069 1367 aa33.1■■■□□ 2.89
ATP6AP1-209ENST00000491569 RAPGEF2Q9Y4G8 1499 aa33.1■■■□□ 2.89
ATP6AP1-209ENST00000491569 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
ATP6AP1-209ENST00000491569 TDRD9Q8NDG6 1382 aaKnown RBP33.06■■■□□ 2.88
ATP6AP1-209ENST00000491569 PRXQ9BXM0 1461 aa33.06■■■□□ 2.88
ATP6AP1-209ENST00000491569 WDR97A6NE52 1622 aa33.03■■■□□ 2.88
ATP6AP1-209ENST00000491569 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
ATP6AP1-209ENST00000491569 TNIKQ9UKE5 1360 aa33.02■■■□□ 2.88
ATP6AP1-209ENST00000491569 CARMIL1Q5VZK9 1371 aa32.93■■■□□ 2.86
ATP6AP1-209ENST00000491569 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
ATP6AP1-209ENST00000491569 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
ATP6AP1-209ENST00000491569 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
ATP6AP1-209ENST00000491569 IFT140Q96RY7 1462 aa32.9■■■□□ 2.86
ATP6AP1-209ENST00000491569 CEP162Q5TB80 1403 aa32.88■■■□□ 2.85
ATP6AP1-209ENST00000491569 AQRO60306 1485 aaKnown RBP eCLIP32.86■■■□□ 2.855e-7■■■■□ 25.8
ATP6AP1-209ENST00000491569 ZNF608Q9ULD9 1512 aaPredicted RBP32.84■■■□□ 2.85
ATP6AP1-209ENST00000491569 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
ATP6AP1-209ENST00000491569 CUL7Q14999 1698 aa32.71■■■□□ 2.83
ATP6AP1-209ENST00000491569 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
ATP6AP1-209ENST00000491569 CLIP1P30622 1438 aa32.65■■■□□ 2.82
ATP6AP1-209ENST00000491569 GRIN2BQ13224 1484 aa32.65■■■□□ 2.82
ATP6AP1-209ENST00000491569 EIF4G3O43432 1585 aaKnown RBP32.63■■■□□ 2.81
ATP6AP1-209ENST00000491569 FHAD1B1AJZ9 1412 aa32.53■■■□□ 2.8
ATP6AP1-209ENST00000491569 ADAMTS12P58397 1594 aa32.5■■■□□ 2.79
ATP6AP1-209ENST00000491569 SNAPC4Q5SXM2 1469 aa32.5■■■□□ 2.79
ATP6AP1-209ENST00000491569 ARHGAP35Q9NRY4 1499 aa32.36■■■□□ 2.77
ATP6AP1-209ENST00000491569 PPARGC1BQ86YN6 1023 aaKnown RBP32.36■■■□□ 2.77
ATP6AP1-209ENST00000491569 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
ATP6AP1-209ENST00000491569 ARAP1Q96P48 1450 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms