RNA–Protein interactions for RNA: ENST00000491561.3

RN7SL346P-201, Transcript of RNA, 7SL, cytoplasmic 346, pseudogene, humanhuman

BASIC

Gene RN7SL346P, Length 294 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL346P-201ENST00000491561 NISCHQ9Y2I1 1504 aa12.68□□□□□ -0.38
RN7SL346P-201ENST00000491561 ABCC9O60706 1549 aa12.23□□□□□ -0.45
RN7SL346P-201ENST00000491561 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
RN7SL346P-201ENST00000491561 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
RN7SL346P-201ENST00000491561 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
RN7SL346P-201ENST00000491561 RB1CC1Q8TDY2 1594 aa11.37□□□□□ -0.59
RN7SL346P-201ENST00000491561 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
RN7SL346P-201ENST00000491561 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
RN7SL346P-201ENST00000491561 NACADO15069 1562 aa11.17□□□□□ -0.62
RN7SL346P-201ENST00000491561 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
RN7SL346P-201ENST00000491561 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
RN7SL346P-201ENST00000491561 CC2D2AQ9P2K1 1620 aa11.06□□□□□ -0.64
RN7SL346P-201ENST00000491561 SHROOM4Q9ULL8 1493 aa10.9□□□□□ -0.66
RN7SL346P-201ENST00000491561 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
RN7SL346P-201ENST00000491561 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
RN7SL346P-201ENST00000491561 CUX2O14529 1486 aa10.85□□□□□ -0.67
RN7SL346P-201ENST00000491561 DCAF8L2P0C7V8 631 aa10.8□□□□□ -0.68
RN7SL346P-201ENST00000491561 TRIM41Q8WV44 630 aa10.68□□□□□ -0.7
RN7SL346P-201ENST00000491561 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
RN7SL346P-201ENST00000491561 SCRIBQ14160 1630 aa10.53□□□□□ -0.72
RN7SL346P-201ENST00000491561 DCAF1Q9Y4B6 1507 aa10.48□□□□□ -0.73
RN7SL346P-201ENST00000491561 THOC2Q8NI27 1593 aaKnown RBP10.42□□□□□ -0.74
RN7SL346P-201ENST00000491561 ZCCHC6Q5VYS8 1495 aaKnown RBP10.38□□□□□ -0.75
RN7SL346P-201ENST00000491561 NESP48681 1621 aa10.36□□□□□ -0.75
RN7SL346P-201ENST00000491561 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
RN7SL346P-201ENST00000491561 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
RN7SL346P-201ENST00000491561 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
RN7SL346P-201ENST00000491561 SMARCA2P51531 1590 aa10.2□□□□□ -0.78
RN7SL346P-201ENST00000491561 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
RN7SL346P-201ENST00000491561 KIF21AQ7Z4S6 1674 aa10.2□□□□□ -0.78
RN7SL346P-201ENST00000491561 OSCARQ8IYS5 282 aa10.19□□□□□ -0.78
RN7SL346P-201ENST00000491561 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
RN7SL346P-201ENST00000491561 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
RN7SL346P-201ENST00000491561 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
RN7SL346P-201ENST00000491561 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
RN7SL346P-201ENST00000491561 AEBP2Q6ZN18 517 aaPredicted RBP10.16□□□□□ -0.78
RN7SL346P-201ENST00000491561 WDR62O43379 1518 aa10.12□□□□□ -0.79
RN7SL346P-201ENST00000491561 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
RN7SL346P-201ENST00000491561 ARHGEF11O15085 1522 aa10.07□□□□□ -0.8
RN7SL346P-201ENST00000491561 MRC2Q9UBG0 1479 aa10.07□□□□□ -0.8
RN7SL346P-201ENST00000491561 SMARCA4P51532 1647 aa10.02□□□□□ -0.81
RN7SL346P-201ENST00000491561 TRHP20396 242 aaPredicted RBP10.01□□□□□ -0.81
RN7SL346P-201ENST00000491561 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
RN7SL346P-201ENST00000491561 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
RN7SL346P-201ENST00000491561 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
RN7SL346P-201ENST00000491561 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
RN7SL346P-201ENST00000491561 CADPSQ9ULU8 1353 aa9.97□□□□□ -0.81
RN7SL346P-201ENST00000491561 ARAP1Q96P48 1450 aa9.95□□□□□ -0.82
RN7SL346P-201ENST00000491561 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
RN7SL346P-201ENST00000491561 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
RN7SL346P-201ENST00000491561 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
RN7SL346P-201ENST00000491561 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
RN7SL346P-201ENST00000491561 ZNF608Q9ULD9 1512 aaPredicted RBP9.81□□□□□ -0.84
RN7SL346P-201ENST00000491561 MROH2BQ7Z745 1585 aa9.76□□□□□ -0.85
RN7SL346P-201ENST00000491561 CHD1O14646 1710 aa9.75□□□□□ -0.85
RN7SL346P-201ENST00000491561 CFTRP13569 1480 aa9.74□□□□□ -0.85
RN7SL346P-201ENST00000491561 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
RN7SL346P-201ENST00000491561 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.86
RN7SL346P-201ENST00000491561 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
RN7SL346P-201ENST00000491561 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
RN7SL346P-201ENST00000491561 AQRO60306 1485 aaKnown RBP eCLIP9.61□□□□□ -0.87
RN7SL346P-201ENST00000491561 WIZO95785 1651 aa9.6□□□□□ -0.87
RN7SL346P-201ENST00000491561 TOPBP1Q92547 1522 aa9.6□□□□□ -0.87
RN7SL346P-201ENST00000491561 TARBP1Q13395 1621 aaKnown RBP9.6□□□□□ -0.87
RN7SL346P-201ENST00000491561 KIF13AQ9H1H9 1805 aa9.57□□□□□ -0.88
RN7SL346P-201ENST00000491561 GAPVD1Q14C86 1478 aa9.57□□□□□ -0.88
RN7SL346P-201ENST00000491561 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
RN7SL346P-201ENST00000491561 FBLN2P98095 1184 aa9.56□□□□□ -0.88
RN7SL346P-201ENST00000491561 SYNJ1O43426 1573 aa9.53□□□□□ -0.88
RN7SL346P-201ENST00000491561 ERCC6L2Q5T890 1561 aa9.51□□□□□ -0.89
RN7SL346P-201ENST00000491561 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
RN7SL346P-201ENST00000491561 DNMBPQ6XZF7 1577 aa9.49□□□□□ -0.89
RN7SL346P-201ENST00000491561 SNAPC4Q5SXM2 1469 aa9.48□□□□□ -0.89
RN7SL346P-201ENST00000491561 FBXO41Q8TF61 875 aa9.48□□□□□ -0.89
RN7SL346P-201ENST00000491561 HECW2Q9P2P5 1572 aa9.47□□□□□ -0.89
RN7SL346P-201ENST00000491561 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
RN7SL346P-201ENST00000491561 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
RN7SL346P-201ENST00000491561 TDRD9Q8NDG6 1382 aaKnown RBP9.43□□□□□ -0.9
RN7SL346P-201ENST00000491561 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
RN7SL346P-201ENST00000491561 WDR97A6NE52 1622 aa9.42□□□□□ -0.9
RN7SL346P-201ENST00000491561 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
RN7SL346P-201ENST00000491561 SYNJ2O15056 1496 aa9.42□□□□□ -0.9
RN7SL346P-201ENST00000491561 RAD54L2Q9Y4B4 1467 aa9.42□□□□□ -0.9
RN7SL346P-201ENST00000491561 ABCC10Q5T3U5 1492 aa9.41□□□□□ -0.9
RN7SL346P-201ENST00000491561 KDM6BO15054 1643 aa9.41□□□□□ -0.9
RN7SL346P-201ENST00000491561 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.9
RN7SL346P-201ENST00000491561 ADGRL1O94910 1474 aa9.38□□□□□ -0.91
RN7SL346P-201ENST00000491561 SOCS7O14512 581 aa9.37□□□□□ -0.91
RN7SL346P-201ENST00000491561 SOGA1O94964 1423 aa9.37□□□□□ -0.91
RN7SL346P-201ENST00000491561 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
RN7SL346P-201ENST00000491561 GRIN2BQ13224 1484 aa9.36□□□□□ -0.91
RN7SL346P-201ENST00000491561 CEP170Q5SW79 1584 aa9.36□□□□□ -0.91
RN7SL346P-201ENST00000491561 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
RN7SL346P-201ENST00000491561 ILDR2Q71H61 639 aa9.35□□□□□ -0.91
RN7SL346P-201ENST00000491561 MAPKBP1O60336 1514 aa9.34□□□□□ -0.91
RN7SL346P-201ENST00000491561 SHROOM2Q13796 1616 aa9.34□□□□□ -0.91
RN7SL346P-201ENST00000491561 CCDC88BA6NC98 1476 aa9.34□□□□□ -0.91
RN7SL346P-201ENST00000491561 NUP160Q12769 1436 aa9.3□□□□□ -0.92
RN7SL346P-201ENST00000491561 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
RN7SL346P-201ENST00000491561 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms