RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
NCK1-211ENST00000491539 ABCC9O60706 1549 aa32.51■■■□□ 2.79
NCK1-211ENST00000491539 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
NCK1-211ENST00000491539 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
NCK1-211ENST00000491539 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
NCK1-211ENST00000491539 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
NCK1-211ENST00000491539 NACADO15069 1562 aa30.44■■■□□ 2.46
NCK1-211ENST00000491539 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
NCK1-211ENST00000491539 PABPN1Q86U42 306 aaKnown RBP eCLIP30.04■■■□□ 2.4
NCK1-211ENST00000491539 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
NCK1-211ENST00000491539 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
NCK1-211ENST00000491539 ZCCHC6Q5VYS8 1495 aaKnown RBP29.53■■■□□ 2.32
NCK1-211ENST00000491539 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
NCK1-211ENST00000491539 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
NCK1-211ENST00000491539 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
NCK1-211ENST00000491539 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
NCK1-211ENST00000491539 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
NCK1-211ENST00000491539 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
NCK1-211ENST00000491539 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
NCK1-211ENST00000491539 CUX2O14529 1486 aa28.1■■■□□ 2.09
NCK1-211ENST00000491539 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
NCK1-211ENST00000491539 ERCC6Q03468 1493 aa28.01■■■□□ 2.07
NCK1-211ENST00000491539 SMARCA4P51532 1647 aa28■■■□□ 2.07
NCK1-211ENST00000491539 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
NCK1-211ENST00000491539 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
NCK1-211ENST00000491539 NESP48681 1621 aa27.89■■■□□ 2.06
NCK1-211ENST00000491539 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
NCK1-211ENST00000491539 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
NCK1-211ENST00000491539 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
NCK1-211ENST00000491539 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
NCK1-211ENST00000491539 BAZ1BQ9UIG0 1483 aaKnown RBP27.67■■■□□ 2.02
NCK1-211ENST00000491539 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
NCK1-211ENST00000491539 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
NCK1-211ENST00000491539 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
NCK1-211ENST00000491539 WIZO95785 1651 aa27.27■■□□□ 1.96
NCK1-211ENST00000491539 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
NCK1-211ENST00000491539 WDR62O43379 1518 aa27.22■■□□□ 1.95
NCK1-211ENST00000491539 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
NCK1-211ENST00000491539 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
NCK1-211ENST00000491539 CEP164Q9UPV0 1460 aa27■■□□□ 1.91
NCK1-211ENST00000491539 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
NCK1-211ENST00000491539 FANCD2Q9BXW9 1451 aa26.92■■□□□ 1.9
NCK1-211ENST00000491539 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
NCK1-211ENST00000491539 CFTRP13569 1480 aa26.81■■□□□ 1.88
NCK1-211ENST00000491539 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
NCK1-211ENST00000491539 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
NCK1-211ENST00000491539 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
NCK1-211ENST00000491539 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
NCK1-211ENST00000491539 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
NCK1-211ENST00000491539 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
NCK1-211ENST00000491539 ZNF608Q9ULD9 1512 aaPredicted RBP26.54■■□□□ 1.84
NCK1-211ENST00000491539 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
NCK1-211ENST00000491539 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
NCK1-211ENST00000491539 CHD1O14646 1710 aa26.45■■□□□ 1.83
NCK1-211ENST00000491539 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
NCK1-211ENST00000491539 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
NCK1-211ENST00000491539 IFT140Q96RY7 1462 aa26.41■■□□□ 1.82
NCK1-211ENST00000491539 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
NCK1-211ENST00000491539 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.81
NCK1-211ENST00000491539 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
NCK1-211ENST00000491539 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
NCK1-211ENST00000491539 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.78
NCK1-211ENST00000491539 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
NCK1-211ENST00000491539 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
NCK1-211ENST00000491539 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
NCK1-211ENST00000491539 WDR97A6NE52 1622 aa26.01■■□□□ 1.75
NCK1-211ENST00000491539 CLASP1Q7Z460 1538 aa26■■□□□ 1.75
NCK1-211ENST00000491539 CYB5RLQ6IPT4 315 aa25.97■■□□□ 1.75
NCK1-211ENST00000491539 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.74
NCK1-211ENST00000491539 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
NCK1-211ENST00000491539 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
NCK1-211ENST00000491539 CUX1P39880 1505 aa25.88■■□□□ 1.73
NCK1-211ENST00000491539 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
NCK1-211ENST00000491539 FBLN2P98095 1184 aa25.85■■□□□ 1.73
NCK1-211ENST00000491539 SYNJ1O43426 1573 aa25.85■■□□□ 1.73
NCK1-211ENST00000491539 SOGA1O94964 1423 aa25.82■■□□□ 1.72
NCK1-211ENST00000491539 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
NCK1-211ENST00000491539 TRHP20396 242 aaPredicted RBP25.76■■□□□ 1.71
NCK1-211ENST00000491539 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
NCK1-211ENST00000491539 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
NCK1-211ENST00000491539 SYNJ2O15056 1496 aa25.71■■□□□ 1.71
NCK1-211ENST00000491539 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
NCK1-211ENST00000491539 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
NCK1-211ENST00000491539 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
NCK1-211ENST00000491539 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
NCK1-211ENST00000491539 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
NCK1-211ENST00000491539 CEP170Q5SW79 1584 aa25.53■■□□□ 1.68
NCK1-211ENST00000491539 SHROOM2Q13796 1616 aa25.47■■□□□ 1.67
NCK1-211ENST00000491539 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
NCK1-211ENST00000491539 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
NCK1-211ENST00000491539 KIF13AQ9H1H9 1805 aa25.45■■□□□ 1.66
NCK1-211ENST00000491539 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
NCK1-211ENST00000491539 NUP160Q12769 1436 aa25.37■■□□□ 1.65
NCK1-211ENST00000491539 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
NCK1-211ENST00000491539 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
NCK1-211ENST00000491539 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
NCK1-211ENST00000491539 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
NCK1-211ENST00000491539 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.63
NCK1-211ENST00000491539 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
NCK1-211ENST00000491539 ADCY10Q96PN6 1610 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms