RNA–Protein interactions for RNA: ENST00000491528.1

LPIN3-203, Transcript of lipin 3, humanhuman

TSL 2

Gene LPIN3, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN3-203ENST00000491528 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
LPIN3-203ENST00000491528 ABCC9O60706 1549 aa22.02■■□□□ 1.12
LPIN3-203ENST00000491528 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
LPIN3-203ENST00000491528 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
LPIN3-203ENST00000491528 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
LPIN3-203ENST00000491528 NACADO15069 1562 aa20.5■□□□□ 0.87
LPIN3-203ENST00000491528 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
LPIN3-203ENST00000491528 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.873e-7■■■■□ 19.3
LPIN3-203ENST00000491528 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
LPIN3-203ENST00000491528 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
LPIN3-203ENST00000491528 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
LPIN3-203ENST00000491528 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
LPIN3-203ENST00000491528 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
LPIN3-203ENST00000491528 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
LPIN3-203ENST00000491528 EIF4G1Q04637 1599 aaKnown RBP19.68■□□□□ 0.74
LPIN3-203ENST00000491528 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
LPIN3-203ENST00000491528 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
LPIN3-203ENST00000491528 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
LPIN3-203ENST00000491528 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
LPIN3-203ENST00000491528 CUX2O14529 1486 aa19.13■□□□□ 0.65
LPIN3-203ENST00000491528 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
LPIN3-203ENST00000491528 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
LPIN3-203ENST00000491528 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
LPIN3-203ENST00000491528 NESP48681 1621 aa18.76■□□□□ 0.59
LPIN3-203ENST00000491528 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
LPIN3-203ENST00000491528 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
LPIN3-203ENST00000491528 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
LPIN3-203ENST00000491528 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
LPIN3-203ENST00000491528 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
LPIN3-203ENST00000491528 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
LPIN3-203ENST00000491528 LAMC3Q9Y6N6 1575 aa18.56■□□□□ 0.56
LPIN3-203ENST00000491528 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
LPIN3-203ENST00000491528 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
LPIN3-203ENST00000491528 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
LPIN3-203ENST00000491528 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
LPIN3-203ENST00000491528 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
LPIN3-203ENST00000491528 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
LPIN3-203ENST00000491528 MRC2Q9UBG0 1479 aa18.36■□□□□ 0.53
LPIN3-203ENST00000491528 WDR62O43379 1518 aa18.29■□□□□ 0.52
LPIN3-203ENST00000491528 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
LPIN3-203ENST00000491528 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
LPIN3-203ENST00000491528 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
LPIN3-203ENST00000491528 WIZO95785 1651 aa18.11■□□□□ 0.49
LPIN3-203ENST00000491528 CFTRP13569 1480 aa18.04■□□□□ 0.48
LPIN3-203ENST00000491528 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
LPIN3-203ENST00000491528 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
LPIN3-203ENST00000491528 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
LPIN3-203ENST00000491528 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
LPIN3-203ENST00000491528 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
LPIN3-203ENST00000491528 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
LPIN3-203ENST00000491528 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
LPIN3-203ENST00000491528 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
LPIN3-203ENST00000491528 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
LPIN3-203ENST00000491528 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
LPIN3-203ENST00000491528 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
LPIN3-203ENST00000491528 FBLN2P98095 1184 aa17.75■□□□□ 0.43
LPIN3-203ENST00000491528 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
LPIN3-203ENST00000491528 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
LPIN3-203ENST00000491528 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
LPIN3-203ENST00000491528 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
LPIN3-203ENST00000491528 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
LPIN3-203ENST00000491528 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
LPIN3-203ENST00000491528 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.42
LPIN3-203ENST00000491528 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
LPIN3-203ENST00000491528 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
LPIN3-203ENST00000491528 CHD1O14646 1710 aa17.64■□□□□ 0.41
LPIN3-203ENST00000491528 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
LPIN3-203ENST00000491528 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
LPIN3-203ENST00000491528 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
LPIN3-203ENST00000491528 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
LPIN3-203ENST00000491528 SOGA1O94964 1423 aa17.51■□□□□ 0.39
LPIN3-203ENST00000491528 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
LPIN3-203ENST00000491528 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
LPIN3-203ENST00000491528 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
LPIN3-203ENST00000491528 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
LPIN3-203ENST00000491528 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
LPIN3-203ENST00000491528 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
LPIN3-203ENST00000491528 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
LPIN3-203ENST00000491528 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
LPIN3-203ENST00000491528 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
LPIN3-203ENST00000491528 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
LPIN3-203ENST00000491528 CUX1P39880 1505 aa17.26■□□□□ 0.35
LPIN3-203ENST00000491528 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
LPIN3-203ENST00000491528 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
LPIN3-203ENST00000491528 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
LPIN3-203ENST00000491528 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
LPIN3-203ENST00000491528 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
LPIN3-203ENST00000491528 CEP170Q5SW79 1584 aa17.1■□□□□ 0.33
LPIN3-203ENST00000491528 NUP160Q12769 1436 aa17.07■□□□□ 0.32
LPIN3-203ENST00000491528 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
LPIN3-203ENST00000491528 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
LPIN3-203ENST00000491528 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
LPIN3-203ENST00000491528 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
LPIN3-203ENST00000491528 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
LPIN3-203ENST00000491528 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
LPIN3-203ENST00000491528 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
LPIN3-203ENST00000491528 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
LPIN3-203ENST00000491528 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
LPIN3-203ENST00000491528 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
LPIN3-203ENST00000491528 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms