RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
HDAC7-225ENST00000491464 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
HDAC7-225ENST00000491464 ABCC9O60706 1549 aa21.39■■□□□ 1.02
HDAC7-225ENST00000491464 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
HDAC7-225ENST00000491464 NACADO15069 1562 aa20.37■□□□□ 0.85
HDAC7-225ENST00000491464 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
HDAC7-225ENST00000491464 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
HDAC7-225ENST00000491464 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
HDAC7-225ENST00000491464 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
HDAC7-225ENST00000491464 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
HDAC7-225ENST00000491464 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
HDAC7-225ENST00000491464 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
HDAC7-225ENST00000491464 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
HDAC7-225ENST00000491464 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
HDAC7-225ENST00000491464 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
HDAC7-225ENST00000491464 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
HDAC7-225ENST00000491464 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
HDAC7-225ENST00000491464 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
HDAC7-225ENST00000491464 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
HDAC7-225ENST00000491464 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
HDAC7-225ENST00000491464 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
HDAC7-225ENST00000491464 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
HDAC7-225ENST00000491464 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-225ENST00000491464 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
HDAC7-225ENST00000491464 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
HDAC7-225ENST00000491464 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.56
HDAC7-225ENST00000491464 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
HDAC7-225ENST00000491464 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
HDAC7-225ENST00000491464 NESP48681 1621 aa18.41■□□□□ 0.54
HDAC7-225ENST00000491464 CUX2O14529 1486 aa18.4■□□□□ 0.54
HDAC7-225ENST00000491464 WIZO95785 1651 aa18.36■□□□□ 0.53
HDAC7-225ENST00000491464 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
HDAC7-225ENST00000491464 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
HDAC7-225ENST00000491464 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-225ENST00000491464 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
HDAC7-225ENST00000491464 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
HDAC7-225ENST00000491464 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
HDAC7-225ENST00000491464 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
HDAC7-225ENST00000491464 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
HDAC7-225ENST00000491464 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
HDAC7-225ENST00000491464 CFTRP13569 1480 aa18.04■□□□□ 0.48
HDAC7-225ENST00000491464 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
HDAC7-225ENST00000491464 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
HDAC7-225ENST00000491464 WDR62O43379 1518 aa18.01■□□□□ 0.47
HDAC7-225ENST00000491464 PRDM2Q13029 1718 aa17.93■□□□□ 0.46
HDAC7-225ENST00000491464 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
HDAC7-225ENST00000491464 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
HDAC7-225ENST00000491464 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
HDAC7-225ENST00000491464 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
HDAC7-225ENST00000491464 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
HDAC7-225ENST00000491464 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
HDAC7-225ENST00000491464 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
HDAC7-225ENST00000491464 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
HDAC7-225ENST00000491464 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
HDAC7-225ENST00000491464 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
HDAC7-225ENST00000491464 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
HDAC7-225ENST00000491464 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
HDAC7-225ENST00000491464 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
HDAC7-225ENST00000491464 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■■■■■ 26.8
HDAC7-225ENST00000491464 SOGA1O94964 1423 aa17.45■□□□□ 0.38
HDAC7-225ENST00000491464 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
HDAC7-225ENST00000491464 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
HDAC7-225ENST00000491464 CUX1P39880 1505 aa17.43■□□□□ 0.38
HDAC7-225ENST00000491464 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
HDAC7-225ENST00000491464 CHD1O14646 1710 aa17.38■□□□□ 0.37
HDAC7-225ENST00000491464 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
HDAC7-225ENST00000491464 FBLN2P98095 1184 aa17.35■□□□□ 0.37
HDAC7-225ENST00000491464 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
HDAC7-225ENST00000491464 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
HDAC7-225ENST00000491464 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
HDAC7-225ENST00000491464 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
HDAC7-225ENST00000491464 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
HDAC7-225ENST00000491464 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
HDAC7-225ENST00000491464 MAGI1Q96QZ7 1491 aaPredicted RBP17.28■□□□□ 0.36
HDAC7-225ENST00000491464 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
HDAC7-225ENST00000491464 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
HDAC7-225ENST00000491464 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
HDAC7-225ENST00000491464 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-225ENST00000491464 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
HDAC7-225ENST00000491464 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
HDAC7-225ENST00000491464 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
HDAC7-225ENST00000491464 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
HDAC7-225ENST00000491464 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
HDAC7-225ENST00000491464 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
HDAC7-225ENST00000491464 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
HDAC7-225ENST00000491464 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
HDAC7-225ENST00000491464 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
HDAC7-225ENST00000491464 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
HDAC7-225ENST00000491464 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
HDAC7-225ENST00000491464 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
HDAC7-225ENST00000491464 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
HDAC7-225ENST00000491464 NUP160Q12769 1436 aa16.98■□□□□ 0.31
HDAC7-225ENST00000491464 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
HDAC7-225ENST00000491464 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-225ENST00000491464 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
HDAC7-225ENST00000491464 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
HDAC7-225ENST00000491464 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
HDAC7-225ENST00000491464 CUL7Q14999 1698 aa16.86■□□□□ 0.29
HDAC7-225ENST00000491464 IGF1RP08069 1367 aa16.83■□□□□ 0.28
HDAC7-225ENST00000491464 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms