RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
SNAP47-211ENST00000491439 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.22
SNAP47-211ENST00000491439 ABCC9O60706 1549 aa22.57■■□□□ 1.2
SNAP47-211ENST00000491439 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
SNAP47-211ENST00000491439 NACADO15069 1562 aa21.41■■□□□ 1.02
SNAP47-211ENST00000491439 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
SNAP47-211ENST00000491439 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
SNAP47-211ENST00000491439 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
SNAP47-211ENST00000491439 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
SNAP47-211ENST00000491439 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
SNAP47-211ENST00000491439 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
SNAP47-211ENST00000491439 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
SNAP47-211ENST00000491439 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
SNAP47-211ENST00000491439 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
SNAP47-211ENST00000491439 SCRIBQ14160 1630 aa20.62■□□□□ 0.89
SNAP47-211ENST00000491439 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
SNAP47-211ENST00000491439 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
SNAP47-211ENST00000491439 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
SNAP47-211ENST00000491439 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
SNAP47-211ENST00000491439 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
SNAP47-211ENST00000491439 SMARCA4P51532 1647 aa19.7■□□□□ 0.74
SNAP47-211ENST00000491439 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SNAP47-211ENST00000491439 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
SNAP47-211ENST00000491439 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
SNAP47-211ENST00000491439 PEG3Q9GZU2 1588 aa19.56■□□□□ 0.72
SNAP47-211ENST00000491439 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
SNAP47-211ENST00000491439 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
SNAP47-211ENST00000491439 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
SNAP47-211ENST00000491439 CUX2O14529 1486 aa19.46■□□□□ 0.71
SNAP47-211ENST00000491439 NESP48681 1621 aa19.43■□□□□ 0.7
SNAP47-211ENST00000491439 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
SNAP47-211ENST00000491439 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
SNAP47-211ENST00000491439 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
SNAP47-211ENST00000491439 WIZO95785 1651 aa19.21■□□□□ 0.67
SNAP47-211ENST00000491439 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
SNAP47-211ENST00000491439 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
SNAP47-211ENST00000491439 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
SNAP47-211ENST00000491439 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
SNAP47-211ENST00000491439 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
SNAP47-211ENST00000491439 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
SNAP47-211ENST00000491439 WDR62O43379 1518 aa19■□□□□ 0.63
SNAP47-211ENST00000491439 CFTRP13569 1480 aa18.99■□□□□ 0.63
SNAP47-211ENST00000491439 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
SNAP47-211ENST00000491439 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
SNAP47-211ENST00000491439 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
SNAP47-211ENST00000491439 URB2Q14146 1524 aaKnown RBP18.8■□□□□ 0.6
SNAP47-211ENST00000491439 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
SNAP47-211ENST00000491439 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
SNAP47-211ENST00000491439 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
SNAP47-211ENST00000491439 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
SNAP47-211ENST00000491439 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
SNAP47-211ENST00000491439 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
SNAP47-211ENST00000491439 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
SNAP47-211ENST00000491439 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
SNAP47-211ENST00000491439 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
SNAP47-211ENST00000491439 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
SNAP47-211ENST00000491439 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
SNAP47-211ENST00000491439 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNAP47-211ENST00000491439 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
SNAP47-211ENST00000491439 SOGA1O94964 1423 aa18.32■□□□□ 0.52
SNAP47-211ENST00000491439 CUX1P39880 1505 aa18.31■□□□□ 0.52
SNAP47-211ENST00000491439 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
SNAP47-211ENST00000491439 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
SNAP47-211ENST00000491439 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
SNAP47-211ENST00000491439 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
SNAP47-211ENST00000491439 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
SNAP47-211ENST00000491439 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
SNAP47-211ENST00000491439 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
SNAP47-211ENST00000491439 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
SNAP47-211ENST00000491439 CHD1O14646 1710 aa18.22■□□□□ 0.51
SNAP47-211ENST00000491439 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
SNAP47-211ENST00000491439 FBLN2P98095 1184 aa18.18■□□□□ 0.5
SNAP47-211ENST00000491439 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
SNAP47-211ENST00000491439 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
SNAP47-211ENST00000491439 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
SNAP47-211ENST00000491439 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
SNAP47-211ENST00000491439 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
SNAP47-211ENST00000491439 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
SNAP47-211ENST00000491439 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
SNAP47-211ENST00000491439 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
SNAP47-211ENST00000491439 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
SNAP47-211ENST00000491439 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
SNAP47-211ENST00000491439 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
SNAP47-211ENST00000491439 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
SNAP47-211ENST00000491439 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
SNAP47-211ENST00000491439 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
SNAP47-211ENST00000491439 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
SNAP47-211ENST00000491439 GRIN2AQ12879 1464 aa17.94■□□□□ 0.46
SNAP47-211ENST00000491439 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
SNAP47-211ENST00000491439 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
SNAP47-211ENST00000491439 NUP160Q12769 1436 aa17.89■□□□□ 0.46
SNAP47-211ENST00000491439 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
SNAP47-211ENST00000491439 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
SNAP47-211ENST00000491439 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
SNAP47-211ENST00000491439 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
SNAP47-211ENST00000491439 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
SNAP47-211ENST00000491439 IGF1RP08069 1367 aa17.68■□□□□ 0.42
SNAP47-211ENST00000491439 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
SNAP47-211ENST00000491439 PRG4Q92954 1404 aaPredicted RBP17.68■□□□□ 0.42
SNAP47-211ENST00000491439 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms