RNA–Protein interactions for RNA: ENST00000491250.1

CDK6-205, Transcript of cyclin dependent kinase 6, humanhuman

TSL 4

Gene CDK6, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-205ENST00000491250 NISCHQ9Y2I1 1504 aa51.72■■■■■ 5.87
CDK6-205ENST00000491250 CCDC180Q9P1Z9 1646 aa46.23■■■■■ 4.99
CDK6-205ENST00000491250 ABCC9O60706 1549 aa45.98■■■■■ 4.95
CDK6-205ENST00000491250 RB1CC1Q8TDY2 1594 aa43.88■■■■■ 4.61
CDK6-205ENST00000491250 NACADO15069 1562 aa43.64■■■■■ 4.58
CDK6-205ENST00000491250 DCAF8L2P0C7V8 631 aa43.62■■■■■ 4.57
CDK6-205ENST00000491250 MYO15BQ96JP2 1530 aa43.12■■■■■ 4.49
CDK6-205ENST00000491250 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.47
CDK6-205ENST00000491250 PABPN1Q86U42 306 aaKnown RBP eCLIP42.88■■■■■ 4.45
CDK6-205ENST00000491250 UNC13AQ9UPW8 1703 aa42.84■■■■■ 4.45
CDK6-205ENST00000491250 DNAJC5BQ9UF47 199 aa42.77■■■■■ 4.44
CDK6-205ENST00000491250 DCAF1Q9Y4B6 1507 aa42.71■■■■■ 4.43
CDK6-205ENST00000491250 BICRAQ9NZM4 1560 aa42.55■■■■■ 4.4
CDK6-205ENST00000491250 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
CDK6-205ENST00000491250 SHROOM4Q9ULL8 1493 aa42.01■■■■■ 4.32
CDK6-205ENST00000491250 CC2D2AQ9P2K1 1620 aa41.51■■■■■ 4.24
CDK6-205ENST00000491250 EIF4G1Q04637 1599 aaKnown RBP41.51■■■■■ 4.24
CDK6-205ENST00000491250 CECR2Q9BXF3 1484 aa41.36■■■■■ 4.21
CDK6-205ENST00000491250 SMARCA4P51532 1647 aa40.28■■■■■ 4.04
CDK6-205ENST00000491250 NCAPD3P42695 1498 aa40.28■■■■■ 4.04
CDK6-205ENST00000491250 ATAD2BQ9ULI0 1458 aa40.24■■■■■ 4.03
CDK6-205ENST00000491250 SMARCA2P51531 1590 aa40.14■■■■■ 4.02
CDK6-205ENST00000491250 BAZ1AQ9NRL2 1556 aaPredicted RBP40.14■■■■■ 4.02
CDK6-205ENST00000491250 HMGXB3Q12766 1538 aa40.02■■■■■ 4
CDK6-205ENST00000491250 BAZ1BQ9UIG0 1483 aaKnown RBP39.89■■■■□ 3.98
CDK6-205ENST00000491250 MROH2BQ7Z745 1585 aa39.87■■■■□ 3.97
CDK6-205ENST00000491250 PEG3Q9GZU2 1588 aa39.84■■■■□ 3.97
CDK6-205ENST00000491250 ERCC6Q03468 1493 aa39.69■■■■□ 3.94
CDK6-205ENST00000491250 NESP48681 1621 aa39.58■■■■□ 3.93
CDK6-205ENST00000491250 CUX2O14529 1486 aa39.44■■■■□ 3.9
CDK6-205ENST00000491250 WIZO95785 1651 aa39.41■■■■□ 3.9
CDK6-205ENST00000491250 LAMC3Q9Y6N6 1575 aa39.33■■■■□ 3.89
CDK6-205ENST00000491250 RSF1Q96T23 1441 aaPredicted RBP39.17■■■■□ 3.86
CDK6-205ENST00000491250 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
CDK6-205ENST00000491250 CADPSQ9ULU8 1353 aa39.1■■■■□ 3.85
CDK6-205ENST00000491250 THOC2Q8NI27 1593 aaKnown RBP39.08■■■■□ 3.85
CDK6-205ENST00000491250 KIF21AQ7Z4S6 1674 aa39.06■■■■□ 3.84
CDK6-205ENST00000491250 DNAJC5Q9H3Z4 198 aa39.01■■■■□ 3.84
CDK6-205ENST00000491250 TOP2AP11388 1531 aaKnown RBP38.94■■■■□ 3.82
CDK6-205ENST00000491250 MRC2Q9UBG0 1479 aa38.77■■■■□ 3.8
CDK6-205ENST00000491250 CFTRP13569 1480 aa38.72■■■■□ 3.79
CDK6-205ENST00000491250 CEP164Q9UPV0 1460 aa38.69■■■■□ 3.78
CDK6-205ENST00000491250 FANCD2Q9BXW9 1451 aa38.67■■■■□ 3.78
CDK6-205ENST00000491250 WDR62O43379 1518 aa38.63■■■■□ 3.78
CDK6-205ENST00000491250 CCDC88BA6NC98 1476 aa38.5■■■■□ 3.75
CDK6-205ENST00000491250 PRDM2Q13029 1718 aa38.33■■■■□ 3.73
CDK6-205ENST00000491250 URB2Q14146 1524 aaKnown RBP38.32■■■■□ 3.72
CDK6-205ENST00000491250 TOPBP1Q92547 1522 aa37.97■■■■□ 3.67
CDK6-205ENST00000491250 IFT140Q96RY7 1462 aa37.9■■■■□ 3.66
CDK6-205ENST00000491250 ABCC8Q09428 1581 aa37.89■■■■□ 3.66
CDK6-205ENST00000491250 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
CDK6-205ENST00000491250 ZNF608Q9ULD9 1512 aaPredicted RBP37.8■■■■□ 3.64
CDK6-205ENST00000491250 SUPT5HO00267 1087 aaKnown RBP37.79■■■■□ 3.64
CDK6-205ENST00000491250 OSCARQ8IYS5 282 aa37.72■■■■□ 3.63
CDK6-205ENST00000491250 POLA1P09884 1462 aaPredicted RBP37.61■■■■□ 3.61
CDK6-205ENST00000491250 EIF4G3O43432 1585 aaKnown RBP37.6■■■■□ 3.61
CDK6-205ENST00000491250 TARBP1Q13395 1621 aaKnown RBP37.58■■■■□ 3.61
CDK6-205ENST00000491250 TRIM41Q8WV44 630 aa37.55■■■■□ 3.6
CDK6-205ENST00000491250 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.67e-11■■■■□ 23.2
CDK6-205ENST00000491250 RAD54L2Q9Y4B4 1467 aa37.49■■■■□ 3.59
CDK6-205ENST00000491250 SOGA1O94964 1423 aa37.45■■■■□ 3.59
CDK6-205ENST00000491250 CUX1P39880 1505 aa37.44■■■■□ 3.58
CDK6-205ENST00000491250 FGD5Q6ZNL6 1462 aa37.44■■■■□ 3.58
CDK6-205ENST00000491250 TDRD9Q8NDG6 1382 aaKnown RBP37.35■■■■□ 3.57
CDK6-205ENST00000491250 CHD1O14646 1710 aa37.25■■■■□ 3.55
CDK6-205ENST00000491250 FBLN2P98095 1184 aa37.25■■■■□ 3.55
CDK6-205ENST00000491250 WDR97A6NE52 1622 aa37.21■■■■□ 3.55
CDK6-205ENST00000491250 RIMBP3CA6NJZ7 1639 aa37.18■■■■□ 3.54
CDK6-205ENST00000491250 RIMBP3BA6NNM3 1639 aa37.18■■■■□ 3.54
CDK6-205ENST00000491250 RIMBP3Q9UFD9 1639 aa37.18■■■■□ 3.54
CDK6-205ENST00000491250 SNAPC4Q5SXM2 1469 aa37.15■■■■□ 3.54
CDK6-205ENST00000491250 ARHGEF11O15085 1522 aa37.11■■■■□ 3.53
CDK6-205ENST00000491250 GRIN2BQ13224 1484 aa37.08■■■■□ 3.53
CDK6-205ENST00000491250 MAGI1Q96QZ7 1491 aaPredicted RBP37.04■■■■□ 3.52
CDK6-205ENST00000491250 ABCA10Q8WWZ4 1543 aa37.01■■■■□ 3.52
CDK6-205ENST00000491250 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
CDK6-205ENST00000491250 GAPVD1Q14C86 1478 aa37.01■■■■□ 3.51
CDK6-205ENST00000491250 WRNQ14191 1432 aaPredicted RBP eCLIP36.98■■■■□ 3.51
CDK6-205ENST00000491250 PBRM1Q86U86 1689 aa36.95■■■■□ 3.51
CDK6-205ENST00000491250 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
CDK6-205ENST00000491250 ABCA5Q8WWZ7 1642 aa36.92■■■■□ 3.5
CDK6-205ENST00000491250 BIVM-ERCC5R4GMW8 1640 aa36.92■■■■□ 3.5
CDK6-205ENST00000491250 SYNJ1O43426 1573 aa36.91■■■■□ 3.5
CDK6-205ENST00000491250 SYNJ2O15056 1496 aa36.91■■■■□ 3.5
CDK6-205ENST00000491250 CYB5RLQ6IPT4 315 aa36.85■■■■□ 3.49
CDK6-205ENST00000491250 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
CDK6-205ENST00000491250 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
CDK6-205ENST00000491250 ADAMTS12P58397 1594 aa36.64■■■■□ 3.46
CDK6-205ENST00000491250 GRIN2AQ12879 1464 aa36.61■■■■□ 3.45
CDK6-205ENST00000491250 FHAD1B1AJZ9 1412 aa36.55■■■■□ 3.44
CDK6-205ENST00000491250 ERICH3Q5RHP9 1530 aa36.54■■■■□ 3.44
CDK6-205ENST00000491250 CEP170Q5SW79 1584 aa36.45■■■■□ 3.43
CDK6-205ENST00000491250 NUP160Q12769 1436 aa36.45■■■■□ 3.43
CDK6-205ENST00000491250 TRHP20396 242 aaPredicted RBP36.36■■■■□ 3.41
CDK6-205ENST00000491250 ERCC6L2Q5T890 1561 aa36.3■■■■□ 3.4
CDK6-205ENST00000491250 KIF27Q86VH2 1401 aa36.25■■■■□ 3.39
CDK6-205ENST00000491250 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
CDK6-205ENST00000491250 IGF1RP08069 1367 aa36.17■■■■□ 3.38
CDK6-205ENST00000491250 PRG4Q92954 1404 aaPredicted RBP36.11■■■■□ 3.37
CDK6-205ENST00000491250 RUSC2Q8N2Y8 1516 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms