RNA–Protein interactions for RNA: ENST00000491086.5

RNF13-215, Transcript of ring finger protein 13, humanhuman

TSL 2

Gene RNF13, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-215ENST00000491086 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
RNF13-215ENST00000491086 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
RNF13-215ENST00000491086 ABCC9O60706 1549 aa26.61■■□□□ 1.85
RNF13-215ENST00000491086 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
RNF13-215ENST00000491086 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
RNF13-215ENST00000491086 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
RNF13-215ENST00000491086 NACADO15069 1562 aa25.39■■□□□ 1.66
RNF13-215ENST00000491086 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
RNF13-215ENST00000491086 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
RNF13-215ENST00000491086 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
RNF13-215ENST00000491086 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
RNF13-215ENST00000491086 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
RNF13-215ENST00000491086 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
RNF13-215ENST00000491086 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
RNF13-215ENST00000491086 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
RNF13-215ENST00000491086 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
RNF13-215ENST00000491086 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
RNF13-215ENST00000491086 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
RNF13-215ENST00000491086 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
RNF13-215ENST00000491086 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
RNF13-215ENST00000491086 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
RNF13-215ENST00000491086 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
RNF13-215ENST00000491086 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
RNF13-215ENST00000491086 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
RNF13-215ENST00000491086 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
RNF13-215ENST00000491086 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
RNF13-215ENST00000491086 PEG3Q9GZU2 1588 aa23.34■■□□□ 1.33
RNF13-215ENST00000491086 WIZO95785 1651 aa23.34■■□□□ 1.33
RNF13-215ENST00000491086 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
RNF13-215ENST00000491086 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
RNF13-215ENST00000491086 NESP48681 1621 aa23.05■■□□□ 1.28
RNF13-215ENST00000491086 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
RNF13-215ENST00000491086 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
RNF13-215ENST00000491086 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
RNF13-215ENST00000491086 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
RNF13-215ENST00000491086 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
RNF13-215ENST00000491086 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
RNF13-215ENST00000491086 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
RNF13-215ENST00000491086 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
RNF13-215ENST00000491086 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
RNF13-215ENST00000491086 CFTRP13569 1480 aa22.6■■□□□ 1.21
RNF13-215ENST00000491086 CUX2O14529 1486 aa22.56■■□□□ 1.2
RNF13-215ENST00000491086 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
RNF13-215ENST00000491086 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
RNF13-215ENST00000491086 MRC2Q9UBG0 1479 aa22.49■■□□□ 1.19
RNF13-215ENST00000491086 WDR62O43379 1518 aa22.44■■□□□ 1.18
RNF13-215ENST00000491086 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
RNF13-215ENST00000491086 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
RNF13-215ENST00000491086 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
RNF13-215ENST00000491086 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
RNF13-215ENST00000491086 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
RNF13-215ENST00000491086 CUX1P39880 1505 aa22.06■■□□□ 1.12
RNF13-215ENST00000491086 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
RNF13-215ENST00000491086 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
RNF13-215ENST00000491086 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
RNF13-215ENST00000491086 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
RNF13-215ENST00000491086 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
RNF13-215ENST00000491086 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
RNF13-215ENST00000491086 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
RNF13-215ENST00000491086 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
RNF13-215ENST00000491086 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
RNF13-215ENST00000491086 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
RNF13-215ENST00000491086 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
RNF13-215ENST00000491086 WDR97A6NE52 1622 aa21.89■■□□□ 1.09
RNF13-215ENST00000491086 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
RNF13-215ENST00000491086 DNAJC5Q9H3Z4 198 aa21.87■■□□□ 1.09
RNF13-215ENST00000491086 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.09
RNF13-215ENST00000491086 SOGA1O94964 1423 aa21.84■■□□□ 1.09
RNF13-215ENST00000491086 CHD1O14646 1710 aa21.8■■□□□ 1.08
RNF13-215ENST00000491086 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
RNF13-215ENST00000491086 PBRM1Q86U86 1689 aa21.77■■□□□ 1.08
RNF13-215ENST00000491086 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
RNF13-215ENST00000491086 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
RNF13-215ENST00000491086 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
RNF13-215ENST00000491086 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
RNF13-215ENST00000491086 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
RNF13-215ENST00000491086 GRIN2BQ13224 1484 aa21.6■■□□□ 1.05
RNF13-215ENST00000491086 FBLN2P98095 1184 aa21.57■■□□□ 1.04
RNF13-215ENST00000491086 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
RNF13-215ENST00000491086 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
RNF13-215ENST00000491086 EEA1Q15075 1411 aa21.52■■□□□ 1.04
RNF13-215ENST00000491086 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
RNF13-215ENST00000491086 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
RNF13-215ENST00000491086 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
RNF13-215ENST00000491086 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
RNF13-215ENST00000491086 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
RNF13-215ENST00000491086 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
RNF13-215ENST00000491086 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
RNF13-215ENST00000491086 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
RNF13-215ENST00000491086 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
RNF13-215ENST00000491086 CLASP1Q7Z460 1538 aa21.4■■□□□ 1.02
RNF13-215ENST00000491086 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
RNF13-215ENST00000491086 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
RNF13-215ENST00000491086 GRIN2AQ12879 1464 aa21.37■■□□□ 1.01
RNF13-215ENST00000491086 IGF1RP08069 1367 aa21.36■■□□□ 1.01
RNF13-215ENST00000491086 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
RNF13-215ENST00000491086 KIF21BO75037 1637 aa21.33■■□□□ 1.01
RNF13-215ENST00000491086 PRXQ9BXM0 1461 aa21.32■■□□□ 1
RNF13-215ENST00000491086 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
RNF13-215ENST00000491086 CUL7Q14999 1698 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms