RNA–Protein interactions for RNA: ENST00000490952.1

FHIT-207, Transcript of fragile histidine triad, humanhuman

TSL 1 (best)

Gene FHIT, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FHIT-207ENST00000490952 AEBP2Q6ZN18 517 aaPredicted RBP31.44■■■□□ 2.62
FHIT-207ENST00000490952 CHIC1Q5VXU3 224 aa30.35■■■□□ 2.45
FHIT-207ENST00000490952 SENP3Q9H4L4 574 aaPredicted RBP26.85■■□□□ 1.89
FHIT-207ENST00000490952 PHF23Q9BUL5 403 aaPredicted RBP26.6■■□□□ 1.85
FHIT-207ENST00000490952 FOXD1Q16676 465 aa24.9■■□□□ 1.58
FHIT-207ENST00000490952 PLPPR3Q6T4P5 718 aa24.54■■□□□ 1.52
FHIT-207ENST00000490952 ADRA2BP18089 450 aa23.64■■□□□ 1.37
FHIT-207ENST00000490952 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
FHIT-207ENST00000490952 PIAS4Q8N2W9 510 aaPredicted RBP23.48■■□□□ 1.35
FHIT-207ENST00000490952 MSH5O43196 834 aa23.19■■□□□ 1.3
FHIT-207ENST00000490952 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
FHIT-207ENST00000490952 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
FHIT-207ENST00000490952 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
FHIT-207ENST00000490952 MAPK8IP2Q13387 824 aaPredicted RBP21.55■■□□□ 1.04
FHIT-207ENST00000490952 PPP4R3CPQ6ZMV5 832 aa21.55■■□□□ 1.04
FHIT-207ENST00000490952 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
FHIT-207ENST00000490952 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
FHIT-207ENST00000490952 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
FHIT-207ENST00000490952 RNF216Q9NWF9 866 aaPredicted RBP20.71■□□□□ 0.91
FHIT-207ENST00000490952 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
FHIT-207ENST00000490952 ABCC9O60706 1549 aa20.68■□□□□ 0.9
FHIT-207ENST00000490952 DCAF8L1A6NGE4 600 aa20.61■□□□□ 0.89
FHIT-207ENST00000490952 KCNA4P22459 653 aa20.58■□□□□ 0.89
FHIT-207ENST00000490952 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
FHIT-207ENST00000490952 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
FHIT-207ENST00000490952 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
FHIT-207ENST00000490952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.776e-7■■■□□ 17.6
FHIT-207ENST00000490952 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
FHIT-207ENST00000490952 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
FHIT-207ENST00000490952 CACNB1Q02641 598 aaPredicted RBP19.66■□□□□ 0.74
FHIT-207ENST00000490952 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
FHIT-207ENST00000490952 SLC4A1APQ9BWU0 796 aaKnown RBP19.59■□□□□ 0.73
FHIT-207ENST00000490952 C1QBPQ07021 282 aaKnown RBP19.56■□□□□ 0.72
FHIT-207ENST00000490952 NACADO15069 1562 aa19.51■□□□□ 0.71
FHIT-207ENST00000490952 SLC4A2P04920 1241 aa19.45■□□□□ 0.7
FHIT-207ENST00000490952 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
FHIT-207ENST00000490952 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
FHIT-207ENST00000490952 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
FHIT-207ENST00000490952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
FHIT-207ENST00000490952 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
FHIT-207ENST00000490952 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.65
FHIT-207ENST00000490952 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
FHIT-207ENST00000490952 CAPN15O75808 1086 aa19.03■□□□□ 0.64
FHIT-207ENST00000490952 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
FHIT-207ENST00000490952 APLP2Q06481 763 aa19.03■□□□□ 0.64
FHIT-207ENST00000490952 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
FHIT-207ENST00000490952 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
FHIT-207ENST00000490952 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
FHIT-207ENST00000490952 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
FHIT-207ENST00000490952 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
FHIT-207ENST00000490952 ZBTB22O15209 634 aa18.88■□□□□ 0.61
FHIT-207ENST00000490952 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
FHIT-207ENST00000490952 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
FHIT-207ENST00000490952 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
FHIT-207ENST00000490952 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
FHIT-207ENST00000490952 DSG3P32926 999 aa18.69■□□□□ 0.58
FHIT-207ENST00000490952 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
FHIT-207ENST00000490952 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
FHIT-207ENST00000490952 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
FHIT-207ENST00000490952 ABCB7O75027 752 aa18.6■□□□□ 0.57
FHIT-207ENST00000490952 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
FHIT-207ENST00000490952 ATF5Q9Y2D1 282 aaPredicted RBP18.49■□□□□ 0.55
FHIT-207ENST00000490952 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
FHIT-207ENST00000490952 ATXN8OSP0DMR3 200 aa18.43■□□□□ 0.54
FHIT-207ENST00000490952 POLA2Q14181 598 aa18.4■□□□□ 0.54
FHIT-207ENST00000490952 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
FHIT-207ENST00000490952 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
FHIT-207ENST00000490952 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
FHIT-207ENST00000490952 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
FHIT-207ENST00000490952 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
FHIT-207ENST00000490952 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
FHIT-207ENST00000490952 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
FHIT-207ENST00000490952 FBLN2P98095 1184 aa17.88■□□□□ 0.45
FHIT-207ENST00000490952 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
FHIT-207ENST00000490952 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
FHIT-207ENST00000490952 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
FHIT-207ENST00000490952 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
FHIT-207ENST00000490952 CUX2O14529 1486 aa17.8■□□□□ 0.44
FHIT-207ENST00000490952 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
FHIT-207ENST00000490952 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
FHIT-207ENST00000490952 NESP48681 1621 aa17.73■□□□□ 0.43
FHIT-207ENST00000490952 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
FHIT-207ENST00000490952 MKRN4PQ13434 485 aaPredicted RBP17.65■□□□□ 0.42
FHIT-207ENST00000490952 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
FHIT-207ENST00000490952 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
FHIT-207ENST00000490952 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
FHIT-207ENST00000490952 AKT1S1Q96B36 256 aa17.55■□□□□ 0.4
FHIT-207ENST00000490952 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.39
FHIT-207ENST00000490952 SPDYE6P0CI01 402 aa17.52■□□□□ 0.39
FHIT-207ENST00000490952 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.39
FHIT-207ENST00000490952 WIZO95785 1651 aa17.46■□□□□ 0.39
FHIT-207ENST00000490952 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
FHIT-207ENST00000490952 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
FHIT-207ENST00000490952 RSF1Q96T23 1441 aaPredicted RBP17.42■□□□□ 0.38
FHIT-207ENST00000490952 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
FHIT-207ENST00000490952 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
FHIT-207ENST00000490952 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
FHIT-207ENST00000490952 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.36
FHIT-207ENST00000490952 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
FHIT-207ENST00000490952 CFTRP13569 1480 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms