RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
SNX12-205ENST00000490561 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
SNX12-205ENST00000490561 ABCC9O60706 1549 aa26.19■■□□□ 1.78
SNX12-205ENST00000490561 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
SNX12-205ENST00000490561 DCAF1Q9Y4B6 1507 aa25.79■■□□□ 1.72
SNX12-205ENST00000490561 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
SNX12-205ENST00000490561 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
SNX12-205ENST00000490561 NACADO15069 1562 aa25.65■■□□□ 1.7
SNX12-205ENST00000490561 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
SNX12-205ENST00000490561 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
SNX12-205ENST00000490561 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
SNX12-205ENST00000490561 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
SNX12-205ENST00000490561 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
SNX12-205ENST00000490561 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
SNX12-205ENST00000490561 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
SNX12-205ENST00000490561 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
SNX12-205ENST00000490561 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
SNX12-205ENST00000490561 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
SNX12-205ENST00000490561 MROH2BQ7Z745 1585 aa23.9■■□□□ 1.42
SNX12-205ENST00000490561 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
SNX12-205ENST00000490561 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
SNX12-205ENST00000490561 SMARCA2P51531 1590 aa23.76■■□□□ 1.39
SNX12-205ENST00000490561 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
SNX12-205ENST00000490561 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
SNX12-205ENST00000490561 WIZO95785 1651 aa23.65■■□□□ 1.38
SNX12-205ENST00000490561 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
SNX12-205ENST00000490561 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
SNX12-205ENST00000490561 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
SNX12-205ENST00000490561 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
SNX12-205ENST00000490561 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
SNX12-205ENST00000490561 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
SNX12-205ENST00000490561 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
SNX12-205ENST00000490561 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
SNX12-205ENST00000490561 CFTRP13569 1480 aa22.95■■□□□ 1.26
SNX12-205ENST00000490561 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
SNX12-205ENST00000490561 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
SNX12-205ENST00000490561 NESP48681 1621 aa22.79■■□□□ 1.24
SNX12-205ENST00000490561 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
SNX12-205ENST00000490561 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
SNX12-205ENST00000490561 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
SNX12-205ENST00000490561 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
SNX12-205ENST00000490561 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
SNX12-205ENST00000490561 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
SNX12-205ENST00000490561 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
SNX12-205ENST00000490561 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
SNX12-205ENST00000490561 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
SNX12-205ENST00000490561 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
SNX12-205ENST00000490561 CUX1P39880 1505 aa22.4■■□□□ 1.18
SNX12-205ENST00000490561 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
SNX12-205ENST00000490561 TOP2BQ02880 1626 aa22.39■■□□□ 1.18
SNX12-205ENST00000490561 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
SNX12-205ENST00000490561 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
SNX12-205ENST00000490561 WDR62O43379 1518 aa22.38■■□□□ 1.17
SNX12-205ENST00000490561 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
SNX12-205ENST00000490561 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
SNX12-205ENST00000490561 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
SNX12-205ENST00000490561 FGD5Q6ZNL6 1462 aa22.25■■□□□ 1.15
SNX12-205ENST00000490561 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
SNX12-205ENST00000490561 CUX2O14529 1486 aa22.19■■□□□ 1.14
SNX12-205ENST00000490561 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
SNX12-205ENST00000490561 SOGA1O94964 1423 aa22.15■■□□□ 1.14
SNX12-205ENST00000490561 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
SNX12-205ENST00000490561 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
SNX12-205ENST00000490561 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.13
SNX12-205ENST00000490561 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
SNX12-205ENST00000490561 EEA1Q15075 1411 aa22.03■■□□□ 1.12
SNX12-205ENST00000490561 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
SNX12-205ENST00000490561 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
SNX12-205ENST00000490561 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
SNX12-205ENST00000490561 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
SNX12-205ENST00000490561 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
SNX12-205ENST00000490561 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
SNX12-205ENST00000490561 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.09
SNX12-205ENST00000490561 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
SNX12-205ENST00000490561 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
SNX12-205ENST00000490561 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
SNX12-205ENST00000490561 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
SNX12-205ENST00000490561 IGF1RP08069 1367 aa21.81■■□□□ 1.08
SNX12-205ENST00000490561 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
SNX12-205ENST00000490561 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
SNX12-205ENST00000490561 CUL7Q14999 1698 aa21.78■■□□□ 1.08
SNX12-205ENST00000490561 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
SNX12-205ENST00000490561 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
SNX12-205ENST00000490561 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
SNX12-205ENST00000490561 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
SNX12-205ENST00000490561 PRXQ9BXM0 1461 aa21.71■■□□□ 1.07
SNX12-205ENST00000490561 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
SNX12-205ENST00000490561 KIF21BO75037 1637 aa21.69■■□□□ 1.06
SNX12-205ENST00000490561 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
SNX12-205ENST00000490561 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
SNX12-205ENST00000490561 GOLGA3Q08378 1498 aa21.62■■□□□ 1.05
SNX12-205ENST00000490561 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
SNX12-205ENST00000490561 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
SNX12-205ENST00000490561 FBLN2P98095 1184 aa21.51■■□□□ 1.03
SNX12-205ENST00000490561 CHD1O14646 1710 aa21.47■■□□□ 1.03
SNX12-205ENST00000490561 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
SNX12-205ENST00000490561 NUP160Q12769 1436 aa21.45■■□□□ 1.02
SNX12-205ENST00000490561 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
SNX12-205ENST00000490561 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
SNX12-205ENST00000490561 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms