RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
SNAP29-203ENST00000490458 ABCC9O60706 1549 aa37.75■■■■□ 3.63
SNAP29-203ENST00000490458 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
SNAP29-203ENST00000490458 RB1CC1Q8TDY2 1594 aa35.81■■■■□ 3.32
SNAP29-203ENST00000490458 DNAJC5BQ9UF47 199 aa35.65■■■■□ 3.3
SNAP29-203ENST00000490458 NACADO15069 1562 aa35.47■■■■□ 3.27
SNAP29-203ENST00000490458 DCAF8L2P0C7V8 631 aa35.13■■■■□ 3.21
SNAP29-203ENST00000490458 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
SNAP29-203ENST00000490458 PABPN1Q86U42 306 aaKnown RBP eCLIP35.05■■■■□ 3.2
SNAP29-203ENST00000490458 MYO15BQ96JP2 1530 aa34.87■■■■□ 3.17
SNAP29-203ENST00000490458 BICRAQ9NZM4 1560 aa34.81■■■■□ 3.16
SNAP29-203ENST00000490458 ZCCHC6Q5VYS8 1495 aaKnown RBP34.41■■■■□ 3.1
SNAP29-203ENST00000490458 DCAF1Q9Y4B6 1507 aa34.31■■■■□ 3.08
SNAP29-203ENST00000490458 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
SNAP29-203ENST00000490458 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
SNAP29-203ENST00000490458 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
SNAP29-203ENST00000490458 CECR2Q9BXF3 1484 aa34.02■■■■□ 3.04
SNAP29-203ENST00000490458 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
SNAP29-203ENST00000490458 DNAJC5Q9H3Z4 198 aa32.93■■■□□ 2.86
SNAP29-203ENST00000490458 NCAPD3P42695 1498 aa32.73■■■□□ 2.83
SNAP29-203ENST00000490458 CUX2O14529 1486 aa32.66■■■□□ 2.82
SNAP29-203ENST00000490458 ERCC6Q03468 1493 aa32.6■■■□□ 2.81
SNAP29-203ENST00000490458 ATAD2BQ9ULI0 1458 aa32.6■■■□□ 2.81
SNAP29-203ENST00000490458 SMARCA4P51532 1647 aa32.54■■■□□ 2.8
SNAP29-203ENST00000490458 HMGXB3Q12766 1538 aa32.5■■■□□ 2.79
SNAP29-203ENST00000490458 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
SNAP29-203ENST00000490458 NESP48681 1621 aa32.36■■■□□ 2.77
SNAP29-203ENST00000490458 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
SNAP29-203ENST00000490458 BAZ1BQ9UIG0 1483 aaKnown RBP32.27■■■□□ 2.76
SNAP29-203ENST00000490458 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
SNAP29-203ENST00000490458 THOC2Q8NI27 1593 aaKnown RBP32.14■■■□□ 2.74
SNAP29-203ENST00000490458 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
SNAP29-203ENST00000490458 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
SNAP29-203ENST00000490458 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
SNAP29-203ENST00000490458 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
SNAP29-203ENST00000490458 CADPSQ9ULU8 1353 aa31.7■■■□□ 2.67
SNAP29-203ENST00000490458 WIZO95785 1651 aa31.68■■■□□ 2.66
SNAP29-203ENST00000490458 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
SNAP29-203ENST00000490458 WDR62O43379 1518 aa31.59■■■□□ 2.65
SNAP29-203ENST00000490458 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
SNAP29-203ENST00000490458 TRIM41Q8WV44 630 aa31.38■■■□□ 2.61
SNAP29-203ENST00000490458 FANCD2Q9BXW9 1451 aa31.38■■■□□ 2.61
SNAP29-203ENST00000490458 CFTRP13569 1480 aa31.3■■■□□ 2.6
SNAP29-203ENST00000490458 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
SNAP29-203ENST00000490458 RSF1Q96T23 1441 aaPredicted RBP31.23■■■□□ 2.59
SNAP29-203ENST00000490458 URB2Q14146 1524 aaKnown RBP31.17■■■□□ 2.58
SNAP29-203ENST00000490458 PRDM2Q13029 1718 aa31.09■■■□□ 2.57
SNAP29-203ENST00000490458 OSCARQ8IYS5 282 aa31.04■■■□□ 2.56
SNAP29-203ENST00000490458 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
SNAP29-203ENST00000490458 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
SNAP29-203ENST00000490458 IFT140Q96RY7 1462 aa30.82■■■□□ 2.52
SNAP29-203ENST00000490458 RIMBP3CA6NJZ7 1639 aa30.8■■■□□ 2.52
SNAP29-203ENST00000490458 RIMBP3BA6NNM3 1639 aa30.8■■■□□ 2.52
SNAP29-203ENST00000490458 RIMBP3Q9UFD9 1639 aa30.8■■■□□ 2.52
SNAP29-203ENST00000490458 TOPBP1Q92547 1522 aa30.77■■■□□ 2.52
SNAP29-203ENST00000490458 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
SNAP29-203ENST00000490458 ARHGEF11O15085 1522 aa30.63■■■□□ 2.49
SNAP29-203ENST00000490458 ABCC8Q09428 1581 aa30.63■■■□□ 2.49
SNAP29-203ENST00000490458 DNMBPQ6XZF7 1577 aa30.63■■■□□ 2.49
SNAP29-203ENST00000490458 CHD1O14646 1710 aa30.54■■■□□ 2.48
SNAP29-203ENST00000490458 TARBP1Q13395 1621 aaKnown RBP30.54■■■□□ 2.48
SNAP29-203ENST00000490458 AQRO60306 1485 aaKnown RBP eCLIP30.47■■■□□ 2.478e-9■■■■□ 24.5
SNAP29-203ENST00000490458 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
SNAP29-203ENST00000490458 CYB5RLQ6IPT4 315 aa30.35■■■□□ 2.45
SNAP29-203ENST00000490458 ARAP1Q96P48 1450 aa30.32■■■□□ 2.44
SNAP29-203ENST00000490458 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
SNAP29-203ENST00000490458 FBLN2P98095 1184 aa30.29■■■□□ 2.44
SNAP29-203ENST00000490458 SOGA1O94964 1423 aa30.24■■■□□ 2.43
SNAP29-203ENST00000490458 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
SNAP29-203ENST00000490458 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
SNAP29-203ENST00000490458 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
SNAP29-203ENST00000490458 WDR97A6NE52 1622 aa30.19■■■□□ 2.42
SNAP29-203ENST00000490458 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
SNAP29-203ENST00000490458 CUX1P39880 1505 aa30.13■■■□□ 2.41
SNAP29-203ENST00000490458 TRHP20396 242 aaPredicted RBP30.11■■■□□ 2.41
SNAP29-203ENST00000490458 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
SNAP29-203ENST00000490458 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
SNAP29-203ENST00000490458 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
SNAP29-203ENST00000490458 CHMP7Q8WUX9 453 aaPredicted RBP30.02■■■□□ 2.4
SNAP29-203ENST00000490458 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
SNAP29-203ENST00000490458 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
SNAP29-203ENST00000490458 GAPVD1Q14C86 1478 aa29.89■■■□□ 2.38
SNAP29-203ENST00000490458 ABCA5Q8WWZ7 1642 aa29.86■■■□□ 2.37
SNAP29-203ENST00000490458 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
SNAP29-203ENST00000490458 GRIN2AQ12879 1464 aa29.67■■■□□ 2.34
SNAP29-203ENST00000490458 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
SNAP29-203ENST00000490458 ERCC6L2Q5T890 1561 aa29.65■■■□□ 2.34
SNAP29-203ENST00000490458 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
SNAP29-203ENST00000490458 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
SNAP29-203ENST00000490458 WRNQ14191 1432 aaPredicted RBP eCLIP29.6■■■□□ 2.33
SNAP29-203ENST00000490458 NUP160Q12769 1436 aa29.58■■■□□ 2.33
SNAP29-203ENST00000490458 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
SNAP29-203ENST00000490458 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
SNAP29-203ENST00000490458 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
SNAP29-203ENST00000490458 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
SNAP29-203ENST00000490458 AEBP2Q6ZN18 517 aaPredicted RBP29.45■■■□□ 2.31
SNAP29-203ENST00000490458 ERICH3Q5RHP9 1530 aa29.45■■■□□ 2.3
SNAP29-203ENST00000490458 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
SNAP29-203ENST00000490458 PRG4Q92954 1404 aaPredicted RBP29.29■■■□□ 2.28
SNAP29-203ENST00000490458 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms