RNA–Protein interactions for RNA: ENST00000490419.1

HOXB6-204, Transcript of homeobox B6, humanhuman

TSL 3

Gene HOXB6, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-204ENST00000490419 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
HOXB6-204ENST00000490419 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
HOXB6-204ENST00000490419 ABCC9O60706 1549 aa21.35■■□□□ 1.01
HOXB6-204ENST00000490419 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
HOXB6-204ENST00000490419 NACADO15069 1562 aa20.59■□□□□ 0.89
HOXB6-204ENST00000490419 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.89
HOXB6-204ENST00000490419 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
HOXB6-204ENST00000490419 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
HOXB6-204ENST00000490419 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
HOXB6-204ENST00000490419 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
HOXB6-204ENST00000490419 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
HOXB6-204ENST00000490419 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
HOXB6-204ENST00000490419 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
HOXB6-204ENST00000490419 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
HOXB6-204ENST00000490419 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
HOXB6-204ENST00000490419 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
HOXB6-204ENST00000490419 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
HOXB6-204ENST00000490419 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
HOXB6-204ENST00000490419 SMARCA4P51532 1647 aa19.14■□□□□ 0.65
HOXB6-204ENST00000490419 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
HOXB6-204ENST00000490419 SMARCA2P51531 1590 aa19■□□□□ 0.63
HOXB6-204ENST00000490419 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
HOXB6-204ENST00000490419 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
HOXB6-204ENST00000490419 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
HOXB6-204ENST00000490419 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
HOXB6-204ENST00000490419 HMGXB3Q12766 1538 aa18.9■□□□□ 0.62
HOXB6-204ENST00000490419 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
HOXB6-204ENST00000490419 WIZO95785 1651 aa18.82■□□□□ 0.6
HOXB6-204ENST00000490419 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
HOXB6-204ENST00000490419 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
HOXB6-204ENST00000490419 NESP48681 1621 aa18.49■□□□□ 0.55
HOXB6-204ENST00000490419 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
HOXB6-204ENST00000490419 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
HOXB6-204ENST00000490419 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
HOXB6-204ENST00000490419 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
HOXB6-204ENST00000490419 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
HOXB6-204ENST00000490419 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
HOXB6-204ENST00000490419 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.52
HOXB6-204ENST00000490419 CFTRP13569 1480 aa18.33■□□□□ 0.52
HOXB6-204ENST00000490419 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
HOXB6-204ENST00000490419 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
HOXB6-204ENST00000490419 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
HOXB6-204ENST00000490419 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
HOXB6-204ENST00000490419 CUX2O14529 1486 aa18.19■□□□□ 0.5
HOXB6-204ENST00000490419 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
HOXB6-204ENST00000490419 WDR62O43379 1518 aa18.09■□□□□ 0.49
HOXB6-204ENST00000490419 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
HOXB6-204ENST00000490419 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
HOXB6-204ENST00000490419 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
HOXB6-204ENST00000490419 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
HOXB6-204ENST00000490419 CUX1P39880 1505 aa17.82■□□□□ 0.44
HOXB6-204ENST00000490419 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
HOXB6-204ENST00000490419 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
HOXB6-204ENST00000490419 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
HOXB6-204ENST00000490419 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
HOXB6-204ENST00000490419 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
HOXB6-204ENST00000490419 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
HOXB6-204ENST00000490419 SOGA1O94964 1423 aa17.72■□□□□ 0.43
HOXB6-204ENST00000490419 TOP2BQ02880 1626 aa17.71■□□□□ 0.43
HOXB6-204ENST00000490419 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
HOXB6-204ENST00000490419 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
HOXB6-204ENST00000490419 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
HOXB6-204ENST00000490419 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
HOXB6-204ENST00000490419 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
HOXB6-204ENST00000490419 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
HOXB6-204ENST00000490419 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
HOXB6-204ENST00000490419 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
HOXB6-204ENST00000490419 PBRM1Q86U86 1689 aa17.53■□□□□ 0.4
HOXB6-204ENST00000490419 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
HOXB6-204ENST00000490419 ABCA5Q8WWZ7 1642 aa17.53■□□□□ 0.4
HOXB6-204ENST00000490419 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
HOXB6-204ENST00000490419 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
HOXB6-204ENST00000490419 CHD1O14646 1710 aa17.47■□□□□ 0.39
HOXB6-204ENST00000490419 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
HOXB6-204ENST00000490419 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
HOXB6-204ENST00000490419 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
HOXB6-204ENST00000490419 FBLN2P98095 1184 aa17.41■□□□□ 0.38
HOXB6-204ENST00000490419 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
HOXB6-204ENST00000490419 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
HOXB6-204ENST00000490419 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
HOXB6-204ENST00000490419 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
HOXB6-204ENST00000490419 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
HOXB6-204ENST00000490419 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
HOXB6-204ENST00000490419 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
HOXB6-204ENST00000490419 GRIN2AQ12879 1464 aa17.28■□□□□ 0.36
HOXB6-204ENST00000490419 CUL7Q14999 1698 aa17.28■□□□□ 0.36
HOXB6-204ENST00000490419 IGF1RP08069 1367 aa17.26■□□□□ 0.35
HOXB6-204ENST00000490419 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
HOXB6-204ENST00000490419 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.34
HOXB6-204ENST00000490419 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
HOXB6-204ENST00000490419 NUP160Q12769 1436 aa17.19■□□□□ 0.34
HOXB6-204ENST00000490419 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
HOXB6-204ENST00000490419 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
HOXB6-204ENST00000490419 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
HOXB6-204ENST00000490419 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
HOXB6-204ENST00000490419 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
HOXB6-204ENST00000490419 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
HOXB6-204ENST00000490419 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
HOXB6-204ENST00000490419 EEA1Q15075 1411 aa17.09■□□□□ 0.33
HOXB6-204ENST00000490419 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms