RNA–Protein interactions for RNA: ENST00000490182.1

SP3-207, Transcript of Sp3 transcription factor, humanhuman

TSL 4

Gene SP3, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-207ENST00000490182 NISCHQ9Y2I1 1504 aa47.25■■■■■ 5.16
SP3-207ENST00000490182 CCDC180Q9P1Z9 1646 aa41.64■■■■■ 4.26
SP3-207ENST00000490182 ZCCHC6Q5VYS8 1495 aaKnown RBP39.59■■■■□ 3.93
SP3-207ENST00000490182 ABCC9O60706 1549 aa39.58■■■■□ 3.93
SP3-207ENST00000490182 DCAF1Q9Y4B6 1507 aa39.29■■■■□ 3.88
SP3-207ENST00000490182 MYO15BQ96JP2 1530 aa39.11■■■■□ 3.85
SP3-207ENST00000490182 NACADO15069 1562 aa38.91■■■■□ 3.82
SP3-207ENST00000490182 DCAF8L2P0C7V8 631 aa38.8■■■■□ 3.8
SP3-207ENST00000490182 RB1CC1Q8TDY2 1594 aa38.66■■■■□ 3.78
SP3-207ENST00000490182 SCRIBQ14160 1630 aa37.89■■■■□ 3.66
SP3-207ENST00000490182 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
SP3-207ENST00000490182 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
SP3-207ENST00000490182 BICRAQ9NZM4 1560 aa37.43■■■■□ 3.58
SP3-207ENST00000490182 PABPN1Q86U42 306 aaKnown RBP eCLIP37.09■■■■□ 3.53
SP3-207ENST00000490182 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
SP3-207ENST00000490182 BAZ1AQ9NRL2 1556 aaPredicted RBP36.58■■■■□ 3.45
SP3-207ENST00000490182 SMARCA4P51532 1647 aa36.43■■■■□ 3.42
SP3-207ENST00000490182 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
SP3-207ENST00000490182 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
SP3-207ENST00000490182 RSF1Q96T23 1441 aaPredicted RBP36.34■■■■□ 3.41
SP3-207ENST00000490182 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
SP3-207ENST00000490182 SMARCA2P51531 1590 aa36.05■■■■□ 3.36
SP3-207ENST00000490182 WIZO95785 1651 aa36■■■■□ 3.35
SP3-207ENST00000490182 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
SP3-207ENST00000490182 SUPT5HO00267 1087 aaKnown RBP35.97■■■■□ 3.35
SP3-207ENST00000490182 CC2D2AQ9P2K1 1620 aa35.92■■■■□ 3.34
SP3-207ENST00000490182 NCAPD3P42695 1498 aa35.88■■■■□ 3.33
SP3-207ENST00000490182 HMGXB3Q12766 1538 aa35.81■■■■□ 3.32
SP3-207ENST00000490182 TOP2AP11388 1531 aaKnown RBP35.77■■■■□ 3.32
SP3-207ENST00000490182 BAZ1BQ9UIG0 1483 aaKnown RBP35.73■■■■□ 3.31
SP3-207ENST00000490182 DNAJC5BQ9UF47 199 aa35.4■■■■□ 3.26
SP3-207ENST00000490182 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
SP3-207ENST00000490182 CFTRP13569 1480 aa34.88■■■■□ 3.17
SP3-207ENST00000490182 CADPSQ9ULU8 1353 aa34.85■■■■□ 3.17
SP3-207ENST00000490182 LAMC3Q9Y6N6 1575 aa34.77■■■■□ 3.16
SP3-207ENST00000490182 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
SP3-207ENST00000490182 NESP48681 1621 aa34.55■■■■□ 3.12
SP3-207ENST00000490182 PDS5BQ9NTI5 1447 aa34.47■■■■□ 3.11
SP3-207ENST00000490182 FANCD2Q9BXW9 1451 aa34.4■■■■□ 3.1
SP3-207ENST00000490182 CEP164Q9UPV0 1460 aa34.28■■■■□ 3.08
SP3-207ENST00000490182 CHIC1Q5VXU3 224 aa34.27■■■■□ 3.08
SP3-207ENST00000490182 WRNQ14191 1432 aaPredicted RBP eCLIP34.23■■■■□ 3.07
SP3-207ENST00000490182 ABCC8Q09428 1581 aa34.22■■■■□ 3.07
SP3-207ENST00000490182 KIF21AQ7Z4S6 1674 aa34.2■■■■□ 3.07
SP3-207ENST00000490182 TOP2BQ02880 1626 aa34.1■■■■□ 3.05
SP3-207ENST00000490182 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
SP3-207ENST00000490182 CUX1P39880 1505 aa34.08■■■■□ 3.05
SP3-207ENST00000490182 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
SP3-207ENST00000490182 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
SP3-207ENST00000490182 DNMBPQ6XZF7 1577 aa34.05■■■■□ 3.04
SP3-207ENST00000490182 MRC2Q9UBG0 1479 aa34.04■■■■□ 3.04
SP3-207ENST00000490182 TRIM41Q8WV44 630 aa34.03■■■■□ 3.04
SP3-207ENST00000490182 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
SP3-207ENST00000490182 TOPBP1Q92547 1522 aa33.98■■■■□ 3.03
SP3-207ENST00000490182 WDR62O43379 1518 aa33.92■■■■□ 3.02
SP3-207ENST00000490182 THOC2Q8NI27 1593 aaKnown RBP33.91■■■■□ 3.02
SP3-207ENST00000490182 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
SP3-207ENST00000490182 POLA1P09884 1462 aaPredicted RBP33.75■■■□□ 2.99
SP3-207ENST00000490182 SOGA1O94964 1423 aa33.62■■■□□ 2.97
SP3-207ENST00000490182 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
SP3-207ENST00000490182 CUX2O14529 1486 aa33.59■■■□□ 2.97
SP3-207ENST00000490182 EEA1Q15075 1411 aa33.58■■■□□ 2.97
SP3-207ENST00000490182 IFT140Q96RY7 1462 aa33.56■■■□□ 2.96
SP3-207ENST00000490182 TARBP1Q13395 1621 aaKnown RBP33.55■■■□□ 2.96
SP3-207ENST00000490182 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
SP3-207ENST00000490182 RAD54L2Q9Y4B4 1467 aa33.51■■■□□ 2.96
SP3-207ENST00000490182 KIF27Q86VH2 1401 aa33.46■■■□□ 2.95
SP3-207ENST00000490182 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
SP3-207ENST00000490182 RUSC2Q8N2Y8 1516 aa33.33■■■□□ 2.93
SP3-207ENST00000490182 GAPVD1Q14C86 1478 aa33.26■■■□□ 2.92
SP3-207ENST00000490182 CSRNP3Q8WYN3 585 aa33.25■■■□□ 2.91
SP3-207ENST00000490182 TDRD9Q8NDG6 1382 aaKnown RBP33.24■■■□□ 2.91
SP3-207ENST00000490182 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
SP3-207ENST00000490182 ZNF608Q9ULD9 1512 aaPredicted RBP33.22■■■□□ 2.91
SP3-207ENST00000490182 IGF1RP08069 1367 aa33.2■■■□□ 2.9
SP3-207ENST00000490182 EIF4G3O43432 1585 aaKnown RBP33.17■■■□□ 2.9
SP3-207ENST00000490182 AQRO60306 1485 aaKnown RBP eCLIP33.15■■■□□ 2.91e-8■■■■■ 44.1
SP3-207ENST00000490182 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
SP3-207ENST00000490182 FAM9AQ8IZU1 332 aaPredicted RBP33.15■■■□□ 2.9
SP3-207ENST00000490182 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
SP3-207ENST00000490182 PRXQ9BXM0 1461 aa33.11■■■□□ 2.89
SP3-207ENST00000490182 CUL7Q14999 1698 aa33.1■■■□□ 2.89
SP3-207ENST00000490182 KIF21BO75037 1637 aa33.1■■■□□ 2.89
SP3-207ENST00000490182 CARMIL1Q5VZK9 1371 aa33■■■□□ 2.87
SP3-207ENST00000490182 MAGI1Q96QZ7 1491 aaPredicted RBP32.99■■■□□ 2.87
SP3-207ENST00000490182 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
SP3-207ENST00000490182 RAPGEF2Q9Y4G8 1499 aa32.94■■■□□ 2.86
SP3-207ENST00000490182 ADAMTS12P58397 1594 aa32.94■■■□□ 2.86
SP3-207ENST00000490182 GOLGA3Q08378 1498 aa32.93■■■□□ 2.86
SP3-207ENST00000490182 SNAPC4Q5SXM2 1469 aa32.9■■■□□ 2.86
SP3-207ENST00000490182 SYNJ2O15056 1496 aa32.82■■■□□ 2.84
SP3-207ENST00000490182 LOC105371045A0A1W2PR82 267 aa32.75■■■□□ 2.83
SP3-207ENST00000490182 TNIKQ9UKE5 1360 aa32.73■■■□□ 2.83
SP3-207ENST00000490182 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
SP3-207ENST00000490182 UBTFP17480 764 aaKnown RBP32.64■■■□□ 2.82
SP3-207ENST00000490182 CHMP7Q8WUX9 453 aaPredicted RBP32.63■■■□□ 2.81
SP3-207ENST00000490182 NUP160Q12769 1436 aa32.57■■■□□ 2.8
SP3-207ENST00000490182 CTTNBP2Q8WZ74 1663 aa32.56■■■□□ 2.8
SP3-207ENST00000490182 CHD1O14646 1710 aa32.54■■■□□ 2.8
SP3-207ENST00000490182 EHMT2Q96KQ7 1210 aa32.51■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms