RNA–Protein interactions for RNA: ENST00000490078.2

APOO-204, Transcript of apolipoprotein O, humanhuman

TSL 1 (best)

Gene APOO, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOO-204ENST00000490078 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
APOO-204ENST00000490078 ABCC9O60706 1549 aa47.17■■■■■ 5.14
APOO-204ENST00000490078 CCDC180Q9P1Z9 1646 aa46.17■■■■■ 4.98
APOO-204ENST00000490078 DNAJC5BQ9UF47 199 aa45.12■■■■■ 4.81
APOO-204ENST00000490078 RB1CC1Q8TDY2 1594 aa44.43■■■■■ 4.7
APOO-204ENST00000490078 NACADO15069 1562 aa43.91■■■■■ 4.62
APOO-204ENST00000490078 PABPN1Q86U42 306 aaKnown RBP eCLIP43.85■■■■■ 4.61
APOO-204ENST00000490078 DCAF8L2P0C7V8 631 aa43.69■■■■■ 4.58
APOO-204ENST00000490078 UNC13AQ9UPW8 1703 aa43.41■■■■■ 4.54
APOO-204ENST00000490078 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
APOO-204ENST00000490078 MYO15BQ96JP2 1530 aa42.99■■■■■ 4.47
APOO-204ENST00000490078 CECR2Q9BXF3 1484 aa42.55■■■■■ 4.4
APOO-204ENST00000490078 CC2D2AQ9P2K1 1620 aa42.53■■■■■ 4.4
APOO-204ENST00000490078 SHROOM4Q9ULL8 1493 aa42.43■■■■■ 4.38
APOO-204ENST00000490078 EIF4G1Q04637 1599 aaKnown RBP42.21■■■■■ 4.35
APOO-204ENST00000490078 ZCCHC6Q5VYS8 1495 aaKnown RBP42.17■■■■■ 4.34
APOO-204ENST00000490078 DCAF1Q9Y4B6 1507 aa42.13■■■■■ 4.33
APOO-204ENST00000490078 SCRIBQ14160 1630 aa42.11■■■■■ 4.33
APOO-204ENST00000490078 DNAJC5Q9H3Z4 198 aa42.01■■■■■ 4.32
APOO-204ENST00000490078 CUX2O14529 1486 aa40.94■■■■■ 4.14
APOO-204ENST00000490078 ERCC6Q03468 1493 aa40.75■■■■■ 4.11
APOO-204ENST00000490078 NCAPD3P42695 1498 aa40.6■■■■■ 4.09
APOO-204ENST00000490078 ATAD2BQ9ULI0 1458 aa40.36■■■■■ 4.05
APOO-204ENST00000490078 NESP48681 1621 aa40.28■■■■■ 4.04
APOO-204ENST00000490078 HMGXB3Q12766 1538 aa40.16■■■■■ 4.02
APOO-204ENST00000490078 SMARCA2P51531 1590 aa40.14■■■■■ 4.02
APOO-204ENST00000490078 SMARCA4P51532 1647 aa40.06■■■■■ 4
APOO-204ENST00000490078 THOC2Q8NI27 1593 aaKnown RBP39.97■■■■□ 3.99
APOO-204ENST00000490078 BAZ1BQ9UIG0 1483 aaKnown RBP39.9■■■■□ 3.98
APOO-204ENST00000490078 TRIM41Q8WV44 630 aa39.85■■■■□ 3.97
APOO-204ENST00000490078 LAMC3Q9Y6N6 1575 aa39.77■■■■□ 3.96
APOO-204ENST00000490078 BAZ1AQ9NRL2 1556 aaPredicted RBP39.72■■■■□ 3.95
APOO-204ENST00000490078 KIF21AQ7Z4S6 1674 aa39.66■■■■□ 3.94
APOO-204ENST00000490078 PEG3Q9GZU2 1588 aa39.65■■■■□ 3.94
APOO-204ENST00000490078 PDS5BQ9NTI5 1447 aa39.61■■■■□ 3.93
APOO-204ENST00000490078 MROH2BQ7Z745 1585 aa39.43■■■■□ 3.9
APOO-204ENST00000490078 CADPSQ9ULU8 1353 aa39.34■■■■□ 3.89
APOO-204ENST00000490078 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
APOO-204ENST00000490078 WDR62O43379 1518 aa39.24■■■■□ 3.87
APOO-204ENST00000490078 OSCARQ8IYS5 282 aa39.02■■■■□ 3.84
APOO-204ENST00000490078 CEP164Q9UPV0 1460 aa38.98■■■■□ 3.83
APOO-204ENST00000490078 WIZO95785 1651 aa38.9■■■■□ 3.82
APOO-204ENST00000490078 FANCD2Q9BXW9 1451 aa38.88■■■■□ 3.81
APOO-204ENST00000490078 CFTRP13569 1480 aa38.68■■■■□ 3.78
APOO-204ENST00000490078 URB2Q14146 1524 aaKnown RBP38.63■■■■□ 3.77
APOO-204ENST00000490078 RIMBP3CA6NJZ7 1639 aa38.54■■■■□ 3.76
APOO-204ENST00000490078 RIMBP3BA6NNM3 1639 aa38.54■■■■□ 3.76
APOO-204ENST00000490078 RIMBP3Q9UFD9 1639 aa38.54■■■■□ 3.76
APOO-204ENST00000490078 ARHGEF11O15085 1522 aa38.33■■■■□ 3.73
APOO-204ENST00000490078 ZNF608Q9ULD9 1512 aaPredicted RBP38.32■■■■□ 3.72
APOO-204ENST00000490078 TOP2AP11388 1531 aaKnown RBP38.3■■■■□ 3.72
APOO-204ENST00000490078 RSF1Q96T23 1441 aaPredicted RBP38.29■■■■□ 3.72
APOO-204ENST00000490078 IFT140Q96RY7 1462 aa38.23■■■■□ 3.71
APOO-204ENST00000490078 CYB5RLQ6IPT4 315 aa38.2■■■■□ 3.71
APOO-204ENST00000490078 PRDM2Q13029 1718 aa38.11■■■■□ 3.69
APOO-204ENST00000490078 TRHP20396 242 aaPredicted RBP38.06■■■■□ 3.68
APOO-204ENST00000490078 TOPBP1Q92547 1522 aa38.04■■■■□ 3.68
APOO-204ENST00000490078 EIF4G3O43432 1585 aaKnown RBP37.99■■■■□ 3.67
APOO-204ENST00000490078 CCDC88BA6NC98 1476 aa37.95■■■■□ 3.67
APOO-204ENST00000490078 ARAP1Q96P48 1450 aa37.91■■■■□ 3.66
APOO-204ENST00000490078 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.65
APOO-204ENST00000490078 CHD1O14646 1710 aa37.87■■■■□ 3.65
APOO-204ENST00000490078 ABCC8Q09428 1581 aa37.86■■■■□ 3.65
APOO-204ENST00000490078 FBLN2P98095 1184 aa37.84■■■■□ 3.65
APOO-204ENST00000490078 DNMBPQ6XZF7 1577 aa37.79■■■■□ 3.64
APOO-204ENST00000490078 TARBP1Q13395 1621 aaKnown RBP37.76■■■■□ 3.63
APOO-204ENST00000490078 POLA1P09884 1462 aaPredicted RBP37.6■■■■□ 3.61
APOO-204ENST00000490078 AEBP2Q6ZN18 517 aaPredicted RBP37.57■■■■□ 3.6
APOO-204ENST00000490078 RAD54L2Q9Y4B4 1467 aa37.53■■■■□ 3.6
APOO-204ENST00000490078 TDRD9Q8NDG6 1382 aaKnown RBP37.52■■■■□ 3.6
APOO-204ENST00000490078 SOGA1O94964 1423 aa37.45■■■■□ 3.59
APOO-204ENST00000490078 CLASP1Q7Z460 1538 aa37.43■■■■□ 3.58
APOO-204ENST00000490078 SNAPC4Q5SXM2 1469 aa37.42■■■■□ 3.58
APOO-204ENST00000490078 CHMP7Q8WUX9 453 aaPredicted RBP37.39■■■■□ 3.58
APOO-204ENST00000490078 SYNJ1O43426 1573 aa37.31■■■■□ 3.56
APOO-204ENST00000490078 FGD5Q6ZNL6 1462 aa37.25■■■■□ 3.55
APOO-204ENST00000490078 MAGI1Q96QZ7 1491 aaPredicted RBP37.24■■■■□ 3.55
APOO-204ENST00000490078 WDR97A6NE52 1622 aa37.23■■■■□ 3.55
APOO-204ENST00000490078 GRIN2BQ13224 1484 aa37.18■■■■□ 3.54
APOO-204ENST00000490078 SYNJ2O15056 1496 aa37.15■■■■□ 3.54
APOO-204ENST00000490078 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.53
APOO-204ENST00000490078 CUX1P39880 1505 aa37.08■■■■□ 3.53
APOO-204ENST00000490078 PBRM1Q86U86 1689 aa36.93■■■■□ 3.5
APOO-204ENST00000490078 ERCC6L2Q5T890 1561 aa36.85■■■■□ 3.49
APOO-204ENST00000490078 ABCA10Q8WWZ4 1543 aa36.75■■■■□ 3.47
APOO-204ENST00000490078 ABCA5Q8WWZ7 1642 aa36.75■■■■□ 3.47
APOO-204ENST00000490078 GRIN2AQ12879 1464 aa36.7■■■■□ 3.47
APOO-204ENST00000490078 CEP170Q5SW79 1584 aa36.67■■■■□ 3.46
APOO-204ENST00000490078 NUP160Q12769 1436 aa36.61■■■■□ 3.45
APOO-204ENST00000490078 ADAMTS12P58397 1594 aa36.54■■■■□ 3.44
APOO-204ENST00000490078 SHROOM2Q13796 1616 aa36.52■■■■□ 3.44
APOO-204ENST00000490078 KIF13AQ9H1H9 1805 aa36.51■■■■□ 3.44
APOO-204ENST00000490078 WRNQ14191 1432 aaPredicted RBP eCLIP36.44■■■■□ 3.42
APOO-204ENST00000490078 FHAD1B1AJZ9 1412 aa36.43■■■■□ 3.42
APOO-204ENST00000490078 PRG4Q92954 1404 aaPredicted RBP36.37■■■■□ 3.41
APOO-204ENST00000490078 FAM69CQ0P6D2 419 aa36.34■■■■□ 3.41
APOO-204ENST00000490078 JPH4Q96JJ6 628 aa36.31■■■■□ 3.4
APOO-204ENST00000490078 ABCC10Q5T3U5 1492 aa36.26■■■■□ 3.4
APOO-204ENST00000490078 ERICH3Q5RHP9 1530 aa36.25■■■■□ 3.39
APOO-204ENST00000490078 NPM1P06748 294 aaKnown RBP eCLIP36.22■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms