RNA–Protein interactions for RNA: ENST00000489780.5

NINL-206, Transcript of ninein like, humanhuman

TSL 3

Gene NINL, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-206ENST00000489780 NISCHQ9Y2I1 1504 aa48.46■■■■■ 5.35
NINL-206ENST00000489780 CCDC180Q9P1Z9 1646 aa43.5■■■■■ 4.55
NINL-206ENST00000489780 ABCC9O60706 1549 aa43.43■■■■■ 4.54
NINL-206ENST00000489780 RB1CC1Q8TDY2 1594 aa41.34■■■■■ 4.21
NINL-206ENST00000489780 NACADO15069 1562 aa41.04■■■■■ 4.16
NINL-206ENST00000489780 DCAF8L2P0C7V8 631 aa40.85■■■■■ 4.13
NINL-206ENST00000489780 DNAJC5BQ9UF47 199 aa40.55■■■■■ 4.08
NINL-206ENST00000489780 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
NINL-206ENST00000489780 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
NINL-206ENST00000489780 PABPN1Q86U42 306 aaKnown RBP eCLIP40.39■■■■■ 4.06
NINL-206ENST00000489780 ZCCHC6Q5VYS8 1495 aaKnown RBP40.22■■■■■ 4.03
NINL-206ENST00000489780 BICRAQ9NZM4 1560 aa40.14■■■■■ 4.02
NINL-206ENST00000489780 DCAF1Q9Y4B6 1507 aa39.99■■■■□ 3.99
NINL-206ENST00000489780 SCRIBQ14160 1630 aa39.72■■■■□ 3.95
NINL-206ENST00000489780 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
NINL-206ENST00000489780 CC2D2AQ9P2K1 1620 aa39.23■■■■□ 3.87
NINL-206ENST00000489780 EIF4G1Q04637 1599 aaKnown RBP39.16■■■■□ 3.86
NINL-206ENST00000489780 CECR2Q9BXF3 1484 aa39.07■■■■□ 3.85
NINL-206ENST00000489780 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
NINL-206ENST00000489780 SMARCA4P51532 1647 aa37.84■■■■□ 3.65
NINL-206ENST00000489780 ATAD2BQ9ULI0 1458 aa37.79■■■■□ 3.64
NINL-206ENST00000489780 SMARCA2P51531 1590 aa37.72■■■■□ 3.63
NINL-206ENST00000489780 HMGXB3Q12766 1538 aa37.66■■■■□ 3.62
NINL-206ENST00000489780 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.62
NINL-206ENST00000489780 ERCC6Q03468 1493 aa37.49■■■■□ 3.59
NINL-206ENST00000489780 BAZ1BQ9UIG0 1483 aaKnown RBP37.48■■■■□ 3.59
NINL-206ENST00000489780 PEG3Q9GZU2 1588 aa37.41■■■■□ 3.58
NINL-206ENST00000489780 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
NINL-206ENST00000489780 NESP48681 1621 aa37.33■■■■□ 3.57
NINL-206ENST00000489780 CUX2O14529 1486 aa37.33■■■■□ 3.57
NINL-206ENST00000489780 DNAJC5Q9H3Z4 198 aa37.11■■■■□ 3.53
NINL-206ENST00000489780 LAMC3Q9Y6N6 1575 aa37.04■■■■□ 3.52
NINL-206ENST00000489780 WIZO95785 1651 aa36.97■■■■□ 3.51
NINL-206ENST00000489780 THOC2Q8NI27 1593 aaKnown RBP36.97■■■■□ 3.51
NINL-206ENST00000489780 KIF21AQ7Z4S6 1674 aa36.9■■■■□ 3.5
NINL-206ENST00000489780 PDS5BQ9NTI5 1447 aa36.78■■■■□ 3.48
NINL-206ENST00000489780 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
NINL-206ENST00000489780 RSF1Q96T23 1441 aaPredicted RBP36.59■■■■□ 3.45
NINL-206ENST00000489780 MRC2Q9UBG0 1479 aa36.53■■■■□ 3.44
NINL-206ENST00000489780 TOP2AP11388 1531 aaKnown RBP36.49■■■■□ 3.43
NINL-206ENST00000489780 WDR62O43379 1518 aa36.44■■■■□ 3.42
NINL-206ENST00000489780 CEP164Q9UPV0 1460 aa36.42■■■■□ 3.42
NINL-206ENST00000489780 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
NINL-206ENST00000489780 CFTRP13569 1480 aa36.33■■■■□ 3.41
NINL-206ENST00000489780 PRDM2Q13029 1718 aa36.1■■■■□ 3.37
NINL-206ENST00000489780 URB2Q14146 1524 aaKnown RBP36.08■■■■□ 3.37
NINL-206ENST00000489780 CCDC88BA6NC98 1476 aa36.03■■■■□ 3.36
NINL-206ENST00000489780 TOPBP1Q92547 1522 aa35.7■■■■□ 3.31
NINL-206ENST00000489780 TRIM41Q8WV44 630 aa35.65■■■■□ 3.3
NINL-206ENST00000489780 IFT140Q96RY7 1462 aa35.64■■■■□ 3.3
NINL-206ENST00000489780 ZNF608Q9ULD9 1512 aaPredicted RBP35.62■■■■□ 3.29
NINL-206ENST00000489780 DNMBPQ6XZF7 1577 aa35.59■■■■□ 3.29
NINL-206ENST00000489780 OSCARQ8IYS5 282 aa35.54■■■■□ 3.28
NINL-206ENST00000489780 ABCC8Q09428 1581 aa35.53■■■■□ 3.28
NINL-206ENST00000489780 EIF4G3O43432 1585 aaKnown RBP35.49■■■■□ 3.27
NINL-206ENST00000489780 TARBP1Q13395 1621 aaKnown RBP35.37■■■■□ 3.25
NINL-206ENST00000489780 POLA1P09884 1462 aaPredicted RBP35.34■■■■□ 3.25
NINL-206ENST00000489780 AQRO60306 1485 aaKnown RBP eCLIP35.28■■■■□ 3.241e-6■■□□□ 14.5
NINL-206ENST00000489780 RIMBP3CA6NJZ7 1639 aa35.24■■■■□ 3.23
NINL-206ENST00000489780 RIMBP3BA6NNM3 1639 aa35.24■■■■□ 3.23
NINL-206ENST00000489780 RIMBP3Q9UFD9 1639 aa35.24■■■■□ 3.23
NINL-206ENST00000489780 CHD1O14646 1710 aa35.21■■■■□ 3.23
NINL-206ENST00000489780 RAD54L2Q9Y4B4 1467 aa35.21■■■■□ 3.23
NINL-206ENST00000489780 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
NINL-206ENST00000489780 CUX1P39880 1505 aa35.13■■■■□ 3.21
NINL-206ENST00000489780 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
NINL-206ENST00000489780 SOGA1O94964 1423 aa35.12■■■■□ 3.21
NINL-206ENST00000489780 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
NINL-206ENST00000489780 TDRD9Q8NDG6 1382 aaKnown RBP35.07■■■■□ 3.2
NINL-206ENST00000489780 FBLN2P98095 1184 aa35.02■■■■□ 3.2
NINL-206ENST00000489780 WDR97A6NE52 1622 aa34.98■■■■□ 3.19
NINL-206ENST00000489780 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
NINL-206ENST00000489780 GRIN2BQ13224 1484 aa34.84■■■■□ 3.17
NINL-206ENST00000489780 MAGI1Q96QZ7 1491 aaPredicted RBP34.83■■■■□ 3.17
NINL-206ENST00000489780 PBRM1Q86U86 1689 aa34.81■■■■□ 3.16
NINL-206ENST00000489780 ARAP1Q96P48 1450 aa34.79■■■■□ 3.16
NINL-206ENST00000489780 CYB5RLQ6IPT4 315 aa34.77■■■■□ 3.16
NINL-206ENST00000489780 CLASP1Q7Z460 1538 aa34.76■■■■□ 3.15
NINL-206ENST00000489780 SYNJ1O43426 1573 aa34.74■■■■□ 3.15
NINL-206ENST00000489780 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
NINL-206ENST00000489780 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
NINL-206ENST00000489780 SYNJ2O15056 1496 aa34.71■■■■□ 3.15
NINL-206ENST00000489780 ABCA5Q8WWZ7 1642 aa34.71■■■■□ 3.15
NINL-206ENST00000489780 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
NINL-206ENST00000489780 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
NINL-206ENST00000489780 TOP2BQ02880 1626 aa34.57■■■■□ 3.12
NINL-206ENST00000489780 WRNQ14191 1432 aaPredicted RBP eCLIP34.56■■■■□ 3.12
NINL-206ENST00000489780 ADAMTS12P58397 1594 aa34.47■■■■□ 3.11
NINL-206ENST00000489780 GRIN2AQ12879 1464 aa34.41■■■■□ 3.1
NINL-206ENST00000489780 TRHP20396 242 aaPredicted RBP34.39■■■■□ 3.1
NINL-206ENST00000489780 CEP170Q5SW79 1584 aa34.32■■■■□ 3.09
NINL-206ENST00000489780 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
NINL-206ENST00000489780 FHAD1B1AJZ9 1412 aa34.27■■■■□ 3.08
NINL-206ENST00000489780 NUP160Q12769 1436 aa34.26■■■■□ 3.07
NINL-206ENST00000489780 ERCC6L2Q5T890 1561 aa34.25■■■■□ 3.07
NINL-206ENST00000489780 SHROOM2Q13796 1616 aa34.14■■■■□ 3.06
NINL-206ENST00000489780 RUSC2Q8N2Y8 1516 aa33.99■■■■□ 3.03
NINL-206ENST00000489780 PRG4Q92954 1404 aaPredicted RBP33.93■■■■□ 3.02
NINL-206ENST00000489780 KIF27Q86VH2 1401 aa33.86■■■■□ 3.01
NINL-206ENST00000489780 CUL7Q14999 1698 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms