RNA–Protein interactions for RNA: ENST00000489593.1

PRRC2B-209, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 2

Gene PRRC2B, Length 797 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-209ENST00000489593 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
PRRC2B-209ENST00000489593 AEBP2Q6ZN18 517 aaPredicted RBP31.81■■■□□ 2.68
PRRC2B-209ENST00000489593 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
PRRC2B-209ENST00000489593 CCDC180Q9P1Z9 1646 aa29.52■■■□□ 2.32
PRRC2B-209ENST00000489593 ABCC9O60706 1549 aa29.14■■■□□ 2.25
PRRC2B-209ENST00000489593 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
PRRC2B-209ENST00000489593 NACADO15069 1562 aa27.8■■■□□ 2.04
PRRC2B-209ENST00000489593 DCAF8L2P0C7V8 631 aa27.66■■■□□ 2.02
PRRC2B-209ENST00000489593 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
PRRC2B-209ENST00000489593 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■□□□ 1.99
PRRC2B-209ENST00000489593 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
PRRC2B-209ENST00000489593 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
PRRC2B-209ENST00000489593 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
PRRC2B-209ENST00000489593 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
PRRC2B-209ENST00000489593 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
PRRC2B-209ENST00000489593 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
PRRC2B-209ENST00000489593 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
PRRC2B-209ENST00000489593 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
PRRC2B-209ENST00000489593 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
PRRC2B-209ENST00000489593 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PRRC2B-209ENST00000489593 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
PRRC2B-209ENST00000489593 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
PRRC2B-209ENST00000489593 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
PRRC2B-209ENST00000489593 NCAPD3P42695 1498 aa25.68■■□□□ 1.7
PRRC2B-209ENST00000489593 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
PRRC2B-209ENST00000489593 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
PRRC2B-209ENST00000489593 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
PRRC2B-209ENST00000489593 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
PRRC2B-209ENST00000489593 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
PRRC2B-209ENST00000489593 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
PRRC2B-209ENST00000489593 FOXD1Q16676 465 aa25.4■■□□□ 1.66
PRRC2B-209ENST00000489593 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
PRRC2B-209ENST00000489593 WIZO95785 1651 aa25.24■■□□□ 1.63
PRRC2B-209ENST00000489593 NESP48681 1621 aa25.18■■□□□ 1.62
PRRC2B-209ENST00000489593 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
PRRC2B-209ENST00000489593 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
PRRC2B-209ENST00000489593 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
PRRC2B-209ENST00000489593 CUX2O14529 1486 aa24.94■■□□□ 1.58
PRRC2B-209ENST00000489593 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
PRRC2B-209ENST00000489593 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
PRRC2B-209ENST00000489593 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
PRRC2B-209ENST00000489593 THOC2Q8NI27 1593 aaKnown RBP24.86■■□□□ 1.57
PRRC2B-209ENST00000489593 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
PRRC2B-209ENST00000489593 CFTRP13569 1480 aa24.71■■□□□ 1.55
PRRC2B-209ENST00000489593 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.53
PRRC2B-209ENST00000489593 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
PRRC2B-209ENST00000489593 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
PRRC2B-209ENST00000489593 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
PRRC2B-209ENST00000489593 WDR62O43379 1518 aa24.57■■□□□ 1.52
PRRC2B-209ENST00000489593 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
PRRC2B-209ENST00000489593 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
PRRC2B-209ENST00000489593 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
PRRC2B-209ENST00000489593 TOPBP1Q92547 1522 aa24.2■■□□□ 1.47
PRRC2B-209ENST00000489593 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
PRRC2B-209ENST00000489593 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
PRRC2B-209ENST00000489593 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
PRRC2B-209ENST00000489593 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
PRRC2B-209ENST00000489593 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
PRRC2B-209ENST00000489593 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
PRRC2B-209ENST00000489593 MSH5O43196 834 aa23.98■■□□□ 1.43
PRRC2B-209ENST00000489593 POTEDQ86YR6 584 aa23.98■■□□□ 1.43
PRRC2B-209ENST00000489593 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
PRRC2B-209ENST00000489593 CUX1P39880 1505 aa23.95■■□□□ 1.43
PRRC2B-209ENST00000489593 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
PRRC2B-209ENST00000489593 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
PRRC2B-209ENST00000489593 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.416e-8■■■■■ 31
PRRC2B-209ENST00000489593 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
PRRC2B-209ENST00000489593 SOGA1O94964 1423 aa23.84■■□□□ 1.41
PRRC2B-209ENST00000489593 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
PRRC2B-209ENST00000489593 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
PRRC2B-209ENST00000489593 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
PRRC2B-209ENST00000489593 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
PRRC2B-209ENST00000489593 CHD1O14646 1710 aa23.71■■□□□ 1.39
PRRC2B-209ENST00000489593 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
PRRC2B-209ENST00000489593 PIAS4Q8N2W9 510 aaPredicted RBP23.66■■□□□ 1.38
PRRC2B-209ENST00000489593 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
PRRC2B-209ENST00000489593 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
PRRC2B-209ENST00000489593 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
PRRC2B-209ENST00000489593 WRNQ14191 1432 aaPredicted RBP eCLIP23.63■■□□□ 1.37
PRRC2B-209ENST00000489593 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
PRRC2B-209ENST00000489593 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
PRRC2B-209ENST00000489593 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
PRRC2B-209ENST00000489593 PBRM1Q86U86 1689 aa23.58■■□□□ 1.37
PRRC2B-209ENST00000489593 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
PRRC2B-209ENST00000489593 RIMBP3CA6NJZ7 1639 aa23.56■■□□□ 1.36
PRRC2B-209ENST00000489593 RIMBP3BA6NNM3 1639 aa23.56■■□□□ 1.36
PRRC2B-209ENST00000489593 RIMBP3Q9UFD9 1639 aa23.56■■□□□ 1.36
PRRC2B-209ENST00000489593 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
PRRC2B-209ENST00000489593 FBLN2P98095 1184 aa23.55■■□□□ 1.36
PRRC2B-209ENST00000489593 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
PRRC2B-209ENST00000489593 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
PRRC2B-209ENST00000489593 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
PRRC2B-209ENST00000489593 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
PRRC2B-209ENST00000489593 CLASP1Q7Z460 1538 aa23.44■■□□□ 1.34
PRRC2B-209ENST00000489593 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
PRRC2B-209ENST00000489593 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
PRRC2B-209ENST00000489593 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
PRRC2B-209ENST00000489593 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
PRRC2B-209ENST00000489593 ADRA2BP18089 450 aa23.32■■□□□ 1.32
PRRC2B-209ENST00000489593 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms