RNA–Protein interactions for RNA: ENST00000489385.5

GABBR1-216, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-216ENST00000489385 NISCHQ9Y2I1 1504 aa51.74■■■■■ 5.87
GABBR1-216ENST00000489385 CCDC180Q9P1Z9 1646 aa46.33■■■■■ 5.01
GABBR1-216ENST00000489385 ABCC9O60706 1549 aa46.23■■■■■ 4.99
GABBR1-216ENST00000489385 RB1CC1Q8TDY2 1594 aa43.89■■■■■ 4.62
GABBR1-216ENST00000489385 NACADO15069 1562 aa43.59■■■■■ 4.57
GABBR1-216ENST00000489385 DNAJC5BQ9UF47 199 aa43.56■■■■■ 4.56
GABBR1-216ENST00000489385 DCAF8L2P0C7V8 631 aa43.39■■■■■ 4.54
GABBR1-216ENST00000489385 MYO15BQ96JP2 1530 aa43.11■■■■■ 4.49
GABBR1-216ENST00000489385 PABPN1Q86U42 306 aaKnown RBP eCLIP43.03■■■■■ 4.48
GABBR1-216ENST00000489385 UNC13AQ9UPW8 1703 aa43.01■■■■■ 4.48
GABBR1-216ENST00000489385 ZCCHC6Q5VYS8 1495 aaKnown RBP43■■■■■ 4.47
GABBR1-216ENST00000489385 DCAF1Q9Y4B6 1507 aa42.76■■■■■ 4.44
GABBR1-216ENST00000489385 BICRAQ9NZM4 1560 aa42.53■■■■■ 4.4
GABBR1-216ENST00000489385 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
GABBR1-216ENST00000489385 SHROOM4Q9ULL8 1493 aa41.99■■■■■ 4.31
GABBR1-216ENST00000489385 CC2D2AQ9P2K1 1620 aa41.72■■■■■ 4.27
GABBR1-216ENST00000489385 CECR2Q9BXF3 1484 aa41.69■■■■■ 4.26
GABBR1-216ENST00000489385 EIF4G1Q04637 1599 aaKnown RBP41.55■■■■■ 4.24
GABBR1-216ENST00000489385 SMARCA4P51532 1647 aa40.33■■■■■ 4.05
GABBR1-216ENST00000489385 DNAJC5Q9H3Z4 198 aa40.31■■■■■ 4.04
GABBR1-216ENST00000489385 NCAPD3P42695 1498 aa40.18■■■■■ 4.02
GABBR1-216ENST00000489385 BAZ1AQ9NRL2 1556 aaPredicted RBP40.14■■■■■ 4.02
GABBR1-216ENST00000489385 ATAD2BQ9ULI0 1458 aa40.14■■■■■ 4.02
GABBR1-216ENST00000489385 SMARCA2P51531 1590 aa40.1■■■■■ 4.01
GABBR1-216ENST00000489385 ERCC6Q03468 1493 aa40.02■■■■■ 4
GABBR1-216ENST00000489385 HMGXB3Q12766 1538 aa40■■■■□ 3.99
GABBR1-216ENST00000489385 CUX2O14529 1486 aa39.98■■■■□ 3.99
GABBR1-216ENST00000489385 MROH2BQ7Z745 1585 aa39.9■■■■□ 3.98
GABBR1-216ENST00000489385 PEG3Q9GZU2 1588 aa39.89■■■■□ 3.98
GABBR1-216ENST00000489385 BAZ1BQ9UIG0 1483 aaKnown RBP39.81■■■■□ 3.96
GABBR1-216ENST00000489385 NESP48681 1621 aa39.58■■■■□ 3.93
GABBR1-216ENST00000489385 WIZO95785 1651 aa39.53■■■■□ 3.92
GABBR1-216ENST00000489385 LAMC3Q9Y6N6 1575 aa39.3■■■■□ 3.88
GABBR1-216ENST00000489385 THOC2Q8NI27 1593 aaKnown RBP39.21■■■■□ 3.87
GABBR1-216ENST00000489385 RSF1Q96T23 1441 aaPredicted RBP39.2■■■■□ 3.87
GABBR1-216ENST00000489385 PDS5BQ9NTI5 1447 aa39.15■■■■□ 3.86
GABBR1-216ENST00000489385 KIF21AQ7Z4S6 1674 aa39.1■■■■□ 3.85
GABBR1-216ENST00000489385 TOP2AP11388 1531 aaKnown RBP38.99■■■■□ 3.83
GABBR1-216ENST00000489385 CADPSQ9ULU8 1353 aa38.96■■■■□ 3.83
GABBR1-216ENST00000489385 MRC2Q9UBG0 1479 aa38.78■■■■□ 3.8
GABBR1-216ENST00000489385 CFTRP13569 1480 aa38.66■■■■□ 3.78
GABBR1-216ENST00000489385 WDR62O43379 1518 aa38.65■■■■□ 3.78
GABBR1-216ENST00000489385 CEP164Q9UPV0 1460 aa38.59■■■■□ 3.77
GABBR1-216ENST00000489385 FANCD2Q9BXW9 1451 aa38.57■■■■□ 3.76
GABBR1-216ENST00000489385 PRDM2Q13029 1718 aa38.57■■■■□ 3.76
GABBR1-216ENST00000489385 TRIM41Q8WV44 630 aa38.51■■■■□ 3.76
GABBR1-216ENST00000489385 CCDC88BA6NC98 1476 aa38.5■■■■□ 3.75
GABBR1-216ENST00000489385 URB2Q14146 1524 aaKnown RBP38.26■■■■□ 3.72
GABBR1-216ENST00000489385 OSCARQ8IYS5 282 aa38.19■■■■□ 3.7
GABBR1-216ENST00000489385 TOPBP1Q92547 1522 aa37.92■■■■□ 3.66
GABBR1-216ENST00000489385 DNMBPQ6XZF7 1577 aa37.85■■■■□ 3.65
GABBR1-216ENST00000489385 ABCC8Q09428 1581 aa37.83■■■■□ 3.65
GABBR1-216ENST00000489385 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
GABBR1-216ENST00000489385 SUPT5HO00267 1087 aaKnown RBP37.8■■■■□ 3.64
GABBR1-216ENST00000489385 ZNF608Q9ULD9 1512 aaPredicted RBP37.73■■■■□ 3.63
GABBR1-216ENST00000489385 RIMBP3CA6NJZ7 1639 aa37.61■■■■□ 3.61
GABBR1-216ENST00000489385 RIMBP3BA6NNM3 1639 aa37.61■■■■□ 3.61
GABBR1-216ENST00000489385 RIMBP3Q9UFD9 1639 aa37.61■■■■□ 3.61
GABBR1-216ENST00000489385 TARBP1Q13395 1621 aaKnown RBP37.6■■■■□ 3.61
GABBR1-216ENST00000489385 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
GABBR1-216ENST00000489385 POLA1P09884 1462 aaPredicted RBP37.55■■■■□ 3.6
GABBR1-216ENST00000489385 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
GABBR1-216ENST00000489385 CUX1P39880 1505 aa37.47■■■■□ 3.59
GABBR1-216ENST00000489385 RAD54L2Q9Y4B4 1467 aa37.41■■■■□ 3.58
GABBR1-216ENST00000489385 FGD5Q6ZNL6 1462 aa37.4■■■■□ 3.58
GABBR1-216ENST00000489385 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.58
GABBR1-216ENST00000489385 FBLN2P98095 1184 aa37.35■■■■□ 3.57
GABBR1-216ENST00000489385 SOGA1O94964 1423 aa37.35■■■■□ 3.57
GABBR1-216ENST00000489385 CYB5RLQ6IPT4 315 aa37.32■■■■□ 3.56
GABBR1-216ENST00000489385 CHD1O14646 1710 aa37.3■■■■□ 3.56
GABBR1-216ENST00000489385 WDR97A6NE52 1622 aa37.25■■■■□ 3.55
GABBR1-216ENST00000489385 TDRD9Q8NDG6 1382 aaKnown RBP37.21■■■■□ 3.55
GABBR1-216ENST00000489385 BIVM-ERCC5R4GMW8 1640 aa37.07■■■■□ 3.53
GABBR1-216ENST00000489385 TRHP20396 242 aaPredicted RBP37.07■■■■□ 3.52
GABBR1-216ENST00000489385 PBRM1Q86U86 1689 aa37.06■■■■□ 3.52
GABBR1-216ENST00000489385 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
GABBR1-216ENST00000489385 ARAP1Q96P48 1450 aa37.06■■■■□ 3.52
GABBR1-216ENST00000489385 TOP2BQ02880 1626 aa37.02■■■■□ 3.52
GABBR1-216ENST00000489385 SYNJ1O43426 1573 aa37.01■■■■□ 3.52
GABBR1-216ENST00000489385 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
GABBR1-216ENST00000489385 GRIN2BQ13224 1484 aa36.99■■■■□ 3.51
GABBR1-216ENST00000489385 ABCA10Q8WWZ4 1543 aa36.98■■■■□ 3.51
GABBR1-216ENST00000489385 ABCA5Q8WWZ7 1642 aa36.97■■■■□ 3.51
GABBR1-216ENST00000489385 WRNQ14191 1432 aaPredicted RBP eCLIP36.97■■■■□ 3.51
GABBR1-216ENST00000489385 MAGI1Q96QZ7 1491 aaPredicted RBP36.95■■■■□ 3.51
GABBR1-216ENST00000489385 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
GABBR1-216ENST00000489385 CLASP1Q7Z460 1538 aa36.83■■■■□ 3.49
GABBR1-216ENST00000489385 SYNJ2O15056 1496 aa36.82■■■■□ 3.48
GABBR1-216ENST00000489385 ADAMTS12P58397 1594 aa36.65■■■■□ 3.46
GABBR1-216ENST00000489385 ERICH3Q5RHP9 1530 aa36.54■■■■□ 3.44
GABBR1-216ENST00000489385 GRIN2AQ12879 1464 aa36.54■■■■□ 3.44
GABBR1-216ENST00000489385 FHAD1B1AJZ9 1412 aa36.46■■■■□ 3.43
GABBR1-216ENST00000489385 CEP170Q5SW79 1584 aa36.44■■■■□ 3.42
GABBR1-216ENST00000489385 NUP160Q12769 1436 aa36.37■■■■□ 3.41
GABBR1-216ENST00000489385 AEBP2Q6ZN18 517 aaPredicted RBP36.26■■■■□ 3.4
GABBR1-216ENST00000489385 ERCC6L2Q5T890 1561 aa36.25■■■■□ 3.39
GABBR1-216ENST00000489385 SHROOM2Q13796 1616 aa36.25■■■■□ 3.39
GABBR1-216ENST00000489385 KIF27Q86VH2 1401 aa36.21■■■■□ 3.39
GABBR1-216ENST00000489385 CUL7Q14999 1698 aa36.19■■■■□ 3.38
GABBR1-216ENST00000489385 RUSC2Q8N2Y8 1516 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms