RNA–Protein interactions for RNA: ENST00000489302.5

PDZD8-203, Transcript of PDZ domain containing 8, humanhuman

TSL 3

Gene PDZD8, Length 740 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-203ENST00000489302 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
PDZD8-203ENST00000489302 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
PDZD8-203ENST00000489302 ABCC9O60706 1549 aa21.91■■□□□ 1.1
PDZD8-203ENST00000489302 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
PDZD8-203ENST00000489302 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
PDZD8-203ENST00000489302 RB1CC1Q8TDY2 1594 aa20.92■□□□□ 0.94
PDZD8-203ENST00000489302 NACADO15069 1562 aa20.84■□□□□ 0.93
PDZD8-203ENST00000489302 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
PDZD8-203ENST00000489302 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
PDZD8-203ENST00000489302 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDZD8-203ENST00000489302 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
PDZD8-203ENST00000489302 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
PDZD8-203ENST00000489302 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
PDZD8-203ENST00000489302 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
PDZD8-203ENST00000489302 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
PDZD8-203ENST00000489302 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
PDZD8-203ENST00000489302 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
PDZD8-203ENST00000489302 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
PDZD8-203ENST00000489302 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
PDZD8-203ENST00000489302 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
PDZD8-203ENST00000489302 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
PDZD8-203ENST00000489302 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.67
PDZD8-203ENST00000489302 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
PDZD8-203ENST00000489302 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
PDZD8-203ENST00000489302 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
PDZD8-203ENST00000489302 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
PDZD8-203ENST00000489302 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
PDZD8-203ENST00000489302 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
PDZD8-203ENST00000489302 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
PDZD8-203ENST00000489302 WIZO95785 1651 aa18.99■□□□□ 0.63
PDZD8-203ENST00000489302 NESP48681 1621 aa18.92■□□□□ 0.62
PDZD8-203ENST00000489302 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
PDZD8-203ENST00000489302 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
PDZD8-203ENST00000489302 LAMC3Q9Y6N6 1575 aa18.75■□□□□ 0.59
PDZD8-203ENST00000489302 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
PDZD8-203ENST00000489302 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
PDZD8-203ENST00000489302 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
PDZD8-203ENST00000489302 CUX2O14529 1486 aa18.65■□□□□ 0.58
PDZD8-203ENST00000489302 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
PDZD8-203ENST00000489302 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
PDZD8-203ENST00000489302 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
PDZD8-203ENST00000489302 CFTRP13569 1480 aa18.55■□□□□ 0.56
PDZD8-203ENST00000489302 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
PDZD8-203ENST00000489302 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
PDZD8-203ENST00000489302 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
PDZD8-203ENST00000489302 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
PDZD8-203ENST00000489302 WDR62O43379 1518 aa18.39■□□□□ 0.53
PDZD8-203ENST00000489302 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
PDZD8-203ENST00000489302 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
PDZD8-203ENST00000489302 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
PDZD8-203ENST00000489302 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
PDZD8-203ENST00000489302 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
PDZD8-203ENST00000489302 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
PDZD8-203ENST00000489302 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
PDZD8-203ENST00000489302 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
PDZD8-203ENST00000489302 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
PDZD8-203ENST00000489302 CUX1P39880 1505 aa18.01■□□□□ 0.47
PDZD8-203ENST00000489302 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
PDZD8-203ENST00000489302 SOGA1O94964 1423 aa17.99■□□□□ 0.47
PDZD8-203ENST00000489302 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDZD8-203ENST00000489302 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
PDZD8-203ENST00000489302 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
PDZD8-203ENST00000489302 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
PDZD8-203ENST00000489302 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
PDZD8-203ENST00000489302 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
PDZD8-203ENST00000489302 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
PDZD8-203ENST00000489302 FBLN2P98095 1184 aa17.89■□□□□ 0.45
PDZD8-203ENST00000489302 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
PDZD8-203ENST00000489302 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
PDZD8-203ENST00000489302 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
PDZD8-203ENST00000489302 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
PDZD8-203ENST00000489302 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
PDZD8-203ENST00000489302 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
PDZD8-203ENST00000489302 CHD1O14646 1710 aa17.76■□□□□ 0.43
PDZD8-203ENST00000489302 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
PDZD8-203ENST00000489302 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
PDZD8-203ENST00000489302 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
PDZD8-203ENST00000489302 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
PDZD8-203ENST00000489302 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
PDZD8-203ENST00000489302 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
PDZD8-203ENST00000489302 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
PDZD8-203ENST00000489302 PBRM1Q86U86 1689 aa17.68■□□□□ 0.42
PDZD8-203ENST00000489302 ABCA5Q8WWZ7 1642 aa17.68■□□□□ 0.42
PDZD8-203ENST00000489302 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
PDZD8-203ENST00000489302 RIMBP3CA6NJZ7 1639 aa17.63■□□□□ 0.41
PDZD8-203ENST00000489302 RIMBP3BA6NNM3 1639 aa17.63■□□□□ 0.41
PDZD8-203ENST00000489302 RIMBP3Q9UFD9 1639 aa17.63■□□□□ 0.41
PDZD8-203ENST00000489302 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
PDZD8-203ENST00000489302 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
PDZD8-203ENST00000489302 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
PDZD8-203ENST00000489302 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
PDZD8-203ENST00000489302 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
PDZD8-203ENST00000489302 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
PDZD8-203ENST00000489302 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
PDZD8-203ENST00000489302 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
PDZD8-203ENST00000489302 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
PDZD8-203ENST00000489302 IGF1RP08069 1367 aa17.45■□□□□ 0.38
PDZD8-203ENST00000489302 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
PDZD8-203ENST00000489302 NUP160Q12769 1436 aa17.43■□□□□ 0.38
PDZD8-203ENST00000489302 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms