RNA–Protein interactions for RNA: ENST00000489260.1

NUP214-209, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-209ENST00000489260 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
NUP214-209ENST00000489260 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
NUP214-209ENST00000489260 ABCC9O60706 1549 aa25.4■■□□□ 1.66
NUP214-209ENST00000489260 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
NUP214-209ENST00000489260 NACADO15069 1562 aa24.12■■□□□ 1.45
NUP214-209ENST00000489260 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
NUP214-209ENST00000489260 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
NUP214-209ENST00000489260 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
NUP214-209ENST00000489260 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
NUP214-209ENST00000489260 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
NUP214-209ENST00000489260 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
NUP214-209ENST00000489260 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
NUP214-209ENST00000489260 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
NUP214-209ENST00000489260 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
NUP214-209ENST00000489260 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
NUP214-209ENST00000489260 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
NUP214-209ENST00000489260 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
NUP214-209ENST00000489260 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
NUP214-209ENST00000489260 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
NUP214-209ENST00000489260 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
NUP214-209ENST00000489260 ATAD2BQ9ULI0 1458 aa22.18■■□□□ 1.14
NUP214-209ENST00000489260 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
NUP214-209ENST00000489260 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
NUP214-209ENST00000489260 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
NUP214-209ENST00000489260 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
NUP214-209ENST00000489260 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
NUP214-209ENST00000489260 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
NUP214-209ENST00000489260 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
NUP214-209ENST00000489260 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
NUP214-209ENST00000489260 CUX2O14529 1486 aa21.92■■□□□ 1.1
NUP214-209ENST00000489260 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
NUP214-209ENST00000489260 NESP48681 1621 aa21.8■■□□□ 1.08
NUP214-209ENST00000489260 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
NUP214-209ENST00000489260 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
NUP214-209ENST00000489260 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
NUP214-209ENST00000489260 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
NUP214-209ENST00000489260 WIZO95785 1651 aa21.6■■□□□ 1.05
NUP214-209ENST00000489260 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
NUP214-209ENST00000489260 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
NUP214-209ENST00000489260 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
NUP214-209ENST00000489260 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
NUP214-209ENST00000489260 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
NUP214-209ENST00000489260 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
NUP214-209ENST00000489260 CFTRP13569 1480 aa21.36■■□□□ 1.01
NUP214-209ENST00000489260 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
NUP214-209ENST00000489260 WDR62O43379 1518 aa21.34■■□□□ 1.01
NUP214-209ENST00000489260 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
NUP214-209ENST00000489260 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
NUP214-209ENST00000489260 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
NUP214-209ENST00000489260 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
NUP214-209ENST00000489260 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
NUP214-209ENST00000489260 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
NUP214-209ENST00000489260 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
NUP214-209ENST00000489260 DNMBPQ6XZF7 1577 aa20.88■□□□□ 0.93
NUP214-209ENST00000489260 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
NUP214-209ENST00000489260 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
NUP214-209ENST00000489260 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
NUP214-209ENST00000489260 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
NUP214-209ENST00000489260 TARBP1Q13395 1621 aaKnown RBP20.69■□□□□ 0.9
NUP214-209ENST00000489260 SOGA1O94964 1423 aa20.67■□□□□ 0.9
NUP214-209ENST00000489260 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.93e-11■■■□□ 18.9
NUP214-209ENST00000489260 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
NUP214-209ENST00000489260 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
NUP214-209ENST00000489260 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
NUP214-209ENST00000489260 FBLN2P98095 1184 aa20.59■□□□□ 0.89
NUP214-209ENST00000489260 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
NUP214-209ENST00000489260 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
NUP214-209ENST00000489260 CUX1P39880 1505 aa20.57■□□□□ 0.88
NUP214-209ENST00000489260 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
NUP214-209ENST00000489260 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
NUP214-209ENST00000489260 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
NUP214-209ENST00000489260 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
NUP214-209ENST00000489260 CHD1O14646 1710 aa20.5■□□□□ 0.87
NUP214-209ENST00000489260 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
NUP214-209ENST00000489260 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
NUP214-209ENST00000489260 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
NUP214-209ENST00000489260 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
NUP214-209ENST00000489260 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
NUP214-209ENST00000489260 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
NUP214-209ENST00000489260 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
NUP214-209ENST00000489260 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
NUP214-209ENST00000489260 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
NUP214-209ENST00000489260 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
NUP214-209ENST00000489260 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
NUP214-209ENST00000489260 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
NUP214-209ENST00000489260 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
NUP214-209ENST00000489260 PBRM1Q86U86 1689 aa20.3■□□□□ 0.84
NUP214-209ENST00000489260 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
NUP214-209ENST00000489260 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.83
NUP214-209ENST00000489260 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
NUP214-209ENST00000489260 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
NUP214-209ENST00000489260 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
NUP214-209ENST00000489260 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
NUP214-209ENST00000489260 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
NUP214-209ENST00000489260 NUP160Q12769 1436 aa20.12■□□□□ 0.81
NUP214-209ENST00000489260 CEP170Q5SW79 1584 aa20.06■□□□□ 0.8
NUP214-209ENST00000489260 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
NUP214-209ENST00000489260 SHROOM2Q13796 1616 aa19.97■□□□□ 0.79
NUP214-209ENST00000489260 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
NUP214-209ENST00000489260 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms